RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CFDP1Q9UEE9 299 aaPredicted RBP17.27■□□□□ 0.36
CLDND1-231ENST00000515620 TNRQ92752 1358 aa17.25■□□□□ 0.35
CLDND1-231ENST00000515620 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
CLDND1-231ENST00000515620 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
CLDND1-231ENST00000515620 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
CLDND1-231ENST00000515620 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
CLDND1-231ENST00000515620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLDND1-231ENST00000515620 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
CLDND1-231ENST00000515620 PZPP20742 1482 aa17.19■□□□□ 0.34
CLDND1-231ENST00000515620 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
CLDND1-231ENST00000515620 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
CLDND1-231ENST00000515620 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
CLDND1-231ENST00000515620 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
CLDND1-231ENST00000515620 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
CLDND1-231ENST00000515620 UGGT1Q9NYU2 1555 aa17.16■□□□□ 0.34
CLDND1-231ENST00000515620 DEPDC5O75140 1603 aa17.16■□□□□ 0.34
CLDND1-231ENST00000515620 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
CLDND1-231ENST00000515620 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
CLDND1-231ENST00000515620 RTEL1-TNFRSF6BF6WH68 1400 aa17.15■□□□□ 0.34
CLDND1-231ENST00000515620 KIF3BO15066 747 aa17.15■□□□□ 0.34
CLDND1-231ENST00000515620 MED14O60244 1454 aa17.15■□□□□ 0.34
CLDND1-231ENST00000515620 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
CLDND1-231ENST00000515620 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
CLDND1-231ENST00000515620 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
CLDND1-231ENST00000515620 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
CLDND1-231ENST00000515620 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
CLDND1-231ENST00000515620 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
CLDND1-231ENST00000515620 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
CLDND1-231ENST00000515620 SYNMO15061 1565 aa17.12■□□□□ 0.33
CLDND1-231ENST00000515620 WASHC2CQ9Y4E1 1318 aa17.12■□□□□ 0.33
CLDND1-231ENST00000515620 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
CLDND1-231ENST00000515620 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
CLDND1-231ENST00000515620 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.32
CLDND1-231ENST00000515620 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-231ENST00000515620 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
CLDND1-231ENST00000515620 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
CLDND1-231ENST00000515620 ZC3H13Q5T200 1668 aaKnown RBP17.03■□□□□ 0.32
CLDND1-231ENST00000515620 ABCC3O15438 1527 aa17.01■□□□□ 0.31
CLDND1-231ENST00000515620 ERVK-7P63135 1459 aa17■□□□□ 0.31
CLDND1-231ENST00000515620 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CLDND1-231ENST00000515620 UBR1Q8IWV7 1749 aa16.97■□□□□ 0.31
CLDND1-231ENST00000515620 POTEAQ6S8J7 498 aa16.96■□□□□ 0.31
CLDND1-231ENST00000515620 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
CLDND1-231ENST00000515620 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
CLDND1-231ENST00000515620 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.3
CLDND1-231ENST00000515620 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
CLDND1-231ENST00000515620 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
CLDND1-231ENST00000515620 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
CLDND1-231ENST00000515620 CEP152O94986 1710 aa16.93■□□□□ 0.3
CLDND1-231ENST00000515620 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
CLDND1-231ENST00000515620 SLIT1O75093 1534 aa16.92■□□□□ 0.3
CLDND1-231ENST00000515620 TSPY4P0CV99 314 aa16.92■□□□□ 0.3
CLDND1-231ENST00000515620 TSPY10P0CW01 314 aa16.92■□□□□ 0.3
CLDND1-231ENST00000515620 LTKP29376 864 aa16.92■□□□□ 0.3
CLDND1-231ENST00000515620 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
CLDND1-231ENST00000515620 SETD1AO15047 1707 aaKnown RBP16.91■□□□□ 0.3
CLDND1-231ENST00000515620 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
CLDND1-231ENST00000515620 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
CLDND1-231ENST00000515620 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
CLDND1-231ENST00000515620 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
CLDND1-231ENST00000515620 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
CLDND1-231ENST00000515620 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
CLDND1-231ENST00000515620 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
CLDND1-231ENST00000515620 PIK3C2BO00750 1634 aa16.85■□□□□ 0.29
CLDND1-231ENST00000515620 FOXD1Q16676 465 aa16.84■□□□□ 0.29
CLDND1-231ENST00000515620 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.28
CLDND1-231ENST00000515620 TMEM2Q9UHN6 1383 aa16.83■□□□□ 0.28
CLDND1-231ENST00000515620 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
CLDND1-231ENST00000515620 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
CLDND1-231ENST00000515620 DUOX2Q9NRD8 1548 aa16.81■□□□□ 0.28
CLDND1-231ENST00000515620 ARHGAP31Q2M1Z3 1444 aa16.81■□□□□ 0.28
CLDND1-231ENST00000515620 PROSER2Q86WR7 435 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-231ENST00000515620 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
CLDND1-231ENST00000515620 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
CLDND1-231ENST00000515620 KCNA6P17658 529 aa16.79■□□□□ 0.28
CLDND1-231ENST00000515620 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
CLDND1-231ENST00000515620 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
CLDND1-231ENST00000515620 SLC26A8Q96RN1 970 aa16.78■□□□□ 0.28
CLDND1-231ENST00000515620 JCADQ9P266 1359 aa16.77■□□□□ 0.28
CLDND1-231ENST00000515620 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
CLDND1-231ENST00000515620 MSH6P52701 1360 aa16.77■□□□□ 0.27
CLDND1-231ENST00000515620 TET3O43151 1660 aa16.76■□□□□ 0.27
CLDND1-231ENST00000515620 KIF15Q9NS87 1388 aa16.76■□□□□ 0.27
CLDND1-231ENST00000515620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLDND1-231ENST00000515620 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
CLDND1-231ENST00000515620 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
CLDND1-231ENST00000515620 LRP6O75581 1613 aa16.74■□□□□ 0.27
CLDND1-231ENST00000515620 MYOM3Q5VTT5 1437 aa16.73■□□□□ 0.27
CLDND1-231ENST00000515620 SLAIN2Q9P270 581 aa16.73■□□□□ 0.27
CLDND1-231ENST00000515620 COL16A1Q07092 1604 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-231ENST00000515620 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLDND1-231ENST00000515620 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
CLDND1-231ENST00000515620 IDI1Q13907 227 aa16.71■□□□□ 0.27
CLDND1-231ENST00000515620 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
CLDND1-231ENST00000515620 KANK1Q14678 1352 aa16.71■□□□□ 0.27
CLDND1-231ENST00000515620 CROCC2H7BZ55 1655 aa16.7■□□□□ 0.26
CLDND1-231ENST00000515620 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
CLDND1-231ENST00000515620 BCANQ96GW7 911 aa16.7■□□□□ 0.26
CLDND1-231ENST00000515620 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
CLDND1-231ENST00000515620 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms