RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 EIF2AK4Q9P2K8 1649 aaKnown RBP39.48■■■■□ 3.91
DDR1-279ENST00000515529 PTPRKQ15262 1439 aa39.47■■■■□ 3.91
DDR1-279ENST00000515529 CEBPAP49715 358 aaPredicted RBP39.41■■■■□ 3.9
DDR1-279ENST00000515529 ROCK1Q13464 1354 aa39.41■■■■□ 3.9
DDR1-279ENST00000515529 WASHC2CQ9Y4E1 1318 aa39.39■■■■□ 3.9
DDR1-279ENST00000515529 CLTCQ00610 1675 aaKnown RBP39.38■■■■□ 3.9
DDR1-279ENST00000515529 RNF17Q9BXT8 1623 aaKnown RBP39.38■■■■□ 3.89
DDR1-279ENST00000515529 FAM135AQ9P2D6 1515 aa39.36■■■■□ 3.89
DDR1-279ENST00000515529 MROH2AA6NES4 1674 aa39.35■■■■□ 3.89
DDR1-279ENST00000515529 KDM5DQ9BY66 1539 aa39.35■■■■□ 3.89
DDR1-279ENST00000515529 ZMYM3Q14202 1370 aa39.34■■■■□ 3.89
DDR1-279ENST00000515529 ANKRD50Q9ULJ7 1429 aa39.33■■■■□ 3.89
DDR1-279ENST00000515529 C3P01024 1663 aa39.32■■■■□ 3.88
DDR1-279ENST00000515529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.29■■■■□ 3.88
DDR1-279ENST00000515529 KANK1Q14678 1352 aa39.27■■■■□ 3.88
DDR1-279ENST00000515529 MROH1Q8NDA8 1641 aa39.24■■■■□ 3.87
DDR1-279ENST00000515529 PRDM15P57071 1507 aaPredicted RBP39.23■■■■□ 3.87
DDR1-279ENST00000515529 ZC3H13Q5T200 1668 aaKnown RBP39.22■■■■□ 3.87
DDR1-279ENST00000515529 ABCC3O15438 1527 aa39.2■■■■□ 3.87
DDR1-279ENST00000515529 DEPDC5O75140 1603 aa39.2■■■■□ 3.87
DDR1-279ENST00000515529 NPATQ14207 1427 aa39.18■■■■□ 3.86
DDR1-279ENST00000515529 CEP152O94986 1710 aa39.13■■■■□ 3.85
DDR1-279ENST00000515529 PZPP20742 1482 aa39.12■■■■□ 3.85
DDR1-279ENST00000515529 SETD1BQ9UPS6 1966 aaKnown RBP39.12■■■■□ 3.85
DDR1-279ENST00000515529 UHRF1BP1Q6BDS2 1440 aa39.12■■■■□ 3.85
DDR1-279ENST00000515529 PREX1Q8TCU6 1659 aa39.12■■■■□ 3.85
DDR1-279ENST00000515529 LMTK3Q96Q04 1460 aa39.09■■■■□ 3.85
DDR1-279ENST00000515529 CAMSAP1Q5T5Y3 1602 aa39.07■■■■□ 3.84
DDR1-279ENST00000515529 NAIPQ13075 1403 aa39.06■■■■□ 3.84
DDR1-279ENST00000515529 FBXO31Q5XUX0 539 aaPredicted RBP39.05■■■■□ 3.84
DDR1-279ENST00000515529 HFM1A2PYH4 1435 aa39.05■■■■□ 3.84
DDR1-279ENST00000515529 VWDEQ8N2E2 1590 aa39.04■■■■□ 3.84
DDR1-279ENST00000515529 UNC13BO14795 1591 aa39.03■■■■□ 3.84
DDR1-279ENST00000515529 GCC2Q8IWJ2 1684 aa39.03■■■■□ 3.84
DDR1-279ENST00000515529 LMTK2Q8IWU2 1503 aa39.01■■■■□ 3.84
DDR1-279ENST00000515529 TNRQ92752 1358 aa39.01■■■■□ 3.84
DDR1-279ENST00000515529 ARHGAP31Q2M1Z3 1444 aa38.98■■■■□ 3.83
DDR1-279ENST00000515529 NUP155O75694 1391 aa38.97■■■■□ 3.83
DDR1-279ENST00000515529 HSPA2P54652 639 aa38.97■■■■□ 3.83
DDR1-279ENST00000515529 MYO3AQ8NEV4 1616 aa38.93■■■■□ 3.82
DDR1-279ENST00000515529 ERVK-7P63135 1459 aa38.92■■■■□ 3.82
DDR1-279ENST00000515529 EFCAB6Q5THR3 1501 aa38.91■■■■□ 3.82
DDR1-279ENST00000515529 SPATA31D1Q6ZQQ2 1576 aa38.9■■■■□ 3.82
DDR1-279ENST00000515529 IQGAP3Q86VI3 1631 aa38.88■■■■□ 3.81
DDR1-279ENST00000515529 TET3O43151 1660 aa38.87■■■■□ 3.81
DDR1-279ENST00000515529 CFAP65Q6ZU64 1925 aaKnown RBP38.86■■■■□ 3.81
DDR1-279ENST00000515529 CEP170BQ9Y4F5 1589 aaPredicted RBP38.86■■■■□ 3.81
DDR1-279ENST00000515529 TRIM52Q96A61 297 aa38.85■■■■□ 3.81
DDR1-279ENST00000515529 A2ML1A8K2U0 1454 aa38.84■■■■□ 3.81
DDR1-279ENST00000515529 NLRP1Q9C000 1473 aa38.84■■■■□ 3.81
DDR1-279ENST00000515529 ZNF142P52746 1687 aaPredicted RBP38.83■■■■□ 3.81
DDR1-279ENST00000515529 RPRD2Q5VT52 1461 aaKnown RBP38.81■■■■□ 3.8
DDR1-279ENST00000515529 SETD5Q9C0A6 1442 aa38.76■■■■□ 3.8
DDR1-279ENST00000515529 NOS1P29475 1434 aa38.71■■■■□ 3.79
DDR1-279ENST00000515529 ACIN1Q9UKV3 1341 aaKnown RBP38.7■■■■□ 3.79
DDR1-279ENST00000515529 UGGT1Q9NYU2 1555 aa38.7■■■■□ 3.79
DDR1-279ENST00000515529 E9PCH4 1651 aa38.69■■■■□ 3.78
DDR1-279ENST00000515529 THEMISQ8N1K5 641 aaPredicted RBP38.69■■■■□ 3.78
DDR1-279ENST00000515529 STAG3Q9UJ98 1225 aa38.66■■■■□ 3.78
DDR1-279ENST00000515529 SLC4A1APQ9BWU0 796 aaKnown RBP38.65■■■■□ 3.78
DDR1-279ENST00000515529 SLC52A1Q9NWF4 448 aa38.64■■■■□ 3.78
DDR1-279ENST00000515529 SYNMO15061 1565 aa38.64■■■■□ 3.78
DDR1-279ENST00000515529 PLA2R1Q13018 1463 aa38.63■■■■□ 3.77
DDR1-279ENST00000515529 DMRT2Q9Y5R5 561 aa38.62■■■■□ 3.77
DDR1-279ENST00000515529 RAB3GAP2Q9H2M9 1393 aa38.61■■■■□ 3.77
DDR1-279ENST00000515529 IDI1Q13907 227 aa38.61■■■■□ 3.77
DDR1-279ENST00000515529 PKD2Q13563 968 aa38.57■■■■□ 3.76
DDR1-279ENST00000515529 STRCQ7RTU9 1775 aa38.56■■■■□ 3.76
DDR1-279ENST00000515529 PIK3C2BO00750 1634 aa38.56■■■■□ 3.76
DDR1-279ENST00000515529 NCKAP5LQ9HCH0 1330 aa38.55■■■■□ 3.76
DDR1-279ENST00000515529 UBR1Q8IWV7 1749 aa38.54■■■■□ 3.76
DDR1-279ENST00000515529 ANKLE2Q86XL3 938 aa38.52■■■■□ 3.76
DDR1-279ENST00000515529 MPHOSPH9Q99550 1183 aa38.49■■■■□ 3.75
DDR1-279ENST00000515529 SPHKAPQ2M3C7 1700 aa38.49■■■■□ 3.75
DDR1-279ENST00000515529 ADGRB3O60242 1522 aa38.48■■■■□ 3.75
DDR1-279ENST00000515529 CHGAP10645 457 aaKnown RBP38.47■■■■□ 3.75
DDR1-279ENST00000515529 PTPRTO14522 1441 aa38.46■■■■□ 3.75
DDR1-279ENST00000515529 KDM5AP29375 1690 aaKnown RBP38.46■■■■□ 3.75
DDR1-279ENST00000515529 HRCP23327 699 aa38.44■■■■□ 3.74
DDR1-279ENST00000515529 TRIM26Q12899 539 aaPredicted RBP38.42■■■■□ 3.74
DDR1-279ENST00000515529 EID1Q9Y6B2 187 aa38.42■■■■□ 3.74
DDR1-279ENST00000515529 POLR1AO95602 1720 aaPredicted RBP38.41■■■■□ 3.74
DDR1-279ENST00000515529 TMEM2Q9UHN6 1383 aa38.4■■■■□ 3.74
DDR1-279ENST00000515529 TRPM2O94759 1503 aa38.39■■■■□ 3.74
DDR1-279ENST00000515529 SLIT1O75093 1534 aa38.38■■■■□ 3.74
DDR1-279ENST00000515529 FOXD1Q16676 465 aa38.38■■■■□ 3.73
DDR1-279ENST00000515529 TXNDC2Q86VQ3 553 aa38.37■■■■□ 3.73
DDR1-279ENST00000515529 ARHGAP23Q9P227 1491 aa38.36■■■■□ 3.73
DDR1-279ENST00000515529 SCAF11Q99590 1463 aaKnown RBP38.35■■■■□ 3.73
DDR1-279ENST00000515529 TMEM131LA2VDJ0 1609 aa38.34■■■■□ 3.73
DDR1-279ENST00000515529 NPHP4O75161 1426 aaPredicted RBP38.32■■■■□ 3.73
DDR1-279ENST00000515529 NEURL4Q96JN8 1562 aa38.31■■■■□ 3.72
DDR1-279ENST00000515529 HDGFP51858 240 aaKnown RBP38.31■■■■□ 3.72
DDR1-279ENST00000515529 LTKP29376 864 aa38.29■■■■□ 3.72
DDR1-279ENST00000515529 CLTCL1P53675 1640 aa38.29■■■■□ 3.72
DDR1-279ENST00000515529 MED14O60244 1454 aa38.28■■■■□ 3.72
DDR1-279ENST00000515529 MYO5BQ9ULV0 1848 aa38.26■■■■□ 3.72
DDR1-279ENST00000515529 PPP1R15AO75807 674 aaPredicted RBP38.26■■■■□ 3.72
DDR1-279ENST00000515529 ZNF326Q5BKZ1 582 aaKnown RBP38.25■■■■□ 3.71
DDR1-279ENST00000515529 RIMS2Q9UQ26 1411 aa38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms