RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, humanhuman

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-209ENST00000515332 FBXO31Q5XUX0 539 aaPredicted RBP39.51■■■■□ 3.92
SGMS2-209ENST00000515332 TNRQ92752 1358 aa39.5■■■■□ 3.91
SGMS2-209ENST00000515332 TOM1O60784 492 aa39.5■■■■□ 3.91
SGMS2-209ENST00000515332 CPS1P31327 1500 aa39.5■■■■□ 3.91
SGMS2-209ENST00000515332 TIAM1Q13009 1591 aa39.49■■■■□ 3.91
SGMS2-209ENST00000515332 DHX29Q7Z478 1369 aaKnown RBP39.48■■■■□ 3.91
SGMS2-209ENST00000515332 SHANK2Q9UPX8 1470 aa39.48■■■■□ 3.91
SGMS2-209ENST00000515332 RTEL1-TNFRSF6BF6WH68 1400 aa39.47■■■■□ 3.91
SGMS2-209ENST00000515332 KIF3BO15066 747 aa39.43■■■■□ 3.9
SGMS2-209ENST00000515332 PZPP20742 1482 aa39.4■■■■□ 3.9
SGMS2-209ENST00000515332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.38■■■■□ 3.89
SGMS2-209ENST00000515332 ANKLE2Q86XL3 938 aa39.38■■■■□ 3.89
SGMS2-209ENST00000515332 KDM5DQ9BY66 1539 aa39.38■■■■□ 3.89
SGMS2-209ENST00000515332 VWDEQ8N2E2 1590 aa39.35■■■■□ 3.89
SGMS2-209ENST00000515332 EHBP1L1Q8N3D4 1523 aa39.35■■■■□ 3.89
SGMS2-209ENST00000515332 WASHC2CQ9Y4E1 1318 aa39.34■■■■□ 3.89
SGMS2-209ENST00000515332 THEMISQ8N1K5 641 aaPredicted RBP39.31■■■■□ 3.88
SGMS2-209ENST00000515332 FAM135AQ9P2D6 1515 aa39.3■■■■□ 3.88
SGMS2-209ENST00000515332 CEP162Q5TB80 1403 aa39.3■■■■□ 3.88
SGMS2-209ENST00000515332 MIA2Q96PC5 1412 aa39.29■■■■□ 3.88
SGMS2-209ENST00000515332 CCDC141Q6ZP82 1450 aa39.29■■■■□ 3.88
SGMS2-209ENST00000515332 NPHP4O75161 1426 aaPredicted RBP39.28■■■■□ 3.88
SGMS2-209ENST00000515332 ALKQ9UM73 1620 aa39.28■■■■□ 3.88
SGMS2-209ENST00000515332 UGGT1Q9NYU2 1555 aa39.27■■■■□ 3.88
SGMS2-209ENST00000515332 NLRP1Q9C000 1473 aa39.26■■■■□ 3.88
SGMS2-209ENST00000515332 PHF23Q9BUL5 403 aaPredicted RBP39.26■■■■□ 3.88
SGMS2-209ENST00000515332 MED14O60244 1454 aa39.24■■■■□ 3.87
SGMS2-209ENST00000515332 DEPDC5O75140 1603 aa39.23■■■■□ 3.87
SGMS2-209ENST00000515332 CAMSAP2Q08AD1 1489 aa39.22■■■■□ 3.87
SGMS2-209ENST00000515332 SENP3Q9H4L4 574 aaPredicted RBP39.19■■■■□ 3.86
SGMS2-209ENST00000515332 IQGAP1P46940 1657 aa39.17■■■■□ 3.86
SGMS2-209ENST00000515332 RSPH4AQ5TD94 716 aa39.16■■■■□ 3.86
SGMS2-209ENST00000515332 NCOA2Q15596 1464 aa39.13■■■■□ 3.85
SGMS2-209ENST00000515332 STRCP1A6NGW2 1772 aa39.12■■■■□ 3.85
SGMS2-209ENST00000515332 LRRC7Q96NW7 1537 aa39.1■■■■□ 3.85
SGMS2-209ENST00000515332 TSPY4P0CV99 314 aa39.06■■■■□ 3.84
SGMS2-209ENST00000515332 TSPY10P0CW01 314 aa39.06■■■■□ 3.84
SGMS2-209ENST00000515332 ARHGEF5Q12774 1597 aa39.05■■■■□ 3.84
SGMS2-209ENST00000515332 RNF17Q9BXT8 1623 aaKnown RBP39.04■■■■□ 3.84
SGMS2-209ENST00000515332 ABCC3O15438 1527 aa39.04■■■■□ 3.84
SGMS2-209ENST00000515332 SYNMO15061 1565 aa39.02■■■■□ 3.84
SGMS2-209ENST00000515332 ERVK-7P63135 1459 aa38.98■■■■□ 3.83
SGMS2-209ENST00000515332 ZC3H13Q5T200 1668 aaKnown RBP38.97■■■■□ 3.83
SGMS2-209ENST00000515332 UBR1Q8IWV7 1749 aa38.9■■■■□ 3.82
SGMS2-209ENST00000515332 SCAF11Q99590 1463 aaKnown RBP38.88■■■■□ 3.81
SGMS2-209ENST00000515332 MROH1Q8NDA8 1641 aa38.88■■■■□ 3.81
SGMS2-209ENST00000515332 MAST1Q9Y2H9 1570 aa38.87■■■■□ 3.81
SGMS2-209ENST00000515332 RGS17Q9UGC6 210 aaPredicted RBP38.87■■■■□ 3.81
SGMS2-209ENST00000515332 EIF2AK4Q9P2K8 1649 aaKnown RBP38.87■■■■□ 3.81
SGMS2-209ENST00000515332 CFAP65Q6ZU64 1925 aaKnown RBP38.86■■■■□ 3.81
SGMS2-209ENST00000515332 CEP152O94986 1710 aa38.86■■■■□ 3.81
SGMS2-209ENST00000515332 LTKP29376 864 aa38.84■■■■□ 3.81
SGMS2-209ENST00000515332 TXNDC2Q86VQ3 553 aa38.82■■■■□ 3.8
SGMS2-209ENST00000515332 ARHGAP23Q9P227 1491 aa38.79■■■■□ 3.8
SGMS2-209ENST00000515332 XIRP1Q702N8 1843 aaKnown RBP38.77■■■■□ 3.8
SGMS2-209ENST00000515332 SLIT1O75093 1534 aa38.77■■■■□ 3.8
SGMS2-209ENST00000515332 LRRC9Q6ZRR7 1453 aa38.73■■■■□ 3.79
SGMS2-209ENST00000515332 EID1Q9Y6B2 187 aa38.71■■■■□ 3.79
SGMS2-209ENST00000515332 DUOX2Q9NRD8 1548 aa38.69■■■■□ 3.78
SGMS2-209ENST00000515332 ARHGAP31Q2M1Z3 1444 aa38.66■■■■□ 3.78
SGMS2-209ENST00000515332 FAM135BQ49AJ0 1406 aa38.66■■■■□ 3.78
SGMS2-209ENST00000515332 PIK3C2BO00750 1634 aa38.63■■■■□ 3.77
SGMS2-209ENST00000515332 POTEAQ6S8J7 498 aa38.62■■■■□ 3.77
SGMS2-209ENST00000515332 PRDM15P57071 1507 aaPredicted RBP38.62■■■■□ 3.77
SGMS2-209ENST00000515332 TMEM2Q9UHN6 1383 aa38.61■■■■□ 3.77
SGMS2-209ENST00000515332 MYOM3Q5VTT5 1437 aa38.61■■■■□ 3.77
SGMS2-209ENST00000515332 TMEM94Q12767 1356 aa38.6■■■■□ 3.77
SGMS2-209ENST00000515332 KANK4Q5T7N3 995 aaPredicted RBP38.59■■■■□ 3.77
SGMS2-209ENST00000515332 KIF15Q9NS87 1388 aa38.58■■■■□ 3.77
SGMS2-209ENST00000515332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.58■■■■□ 3.77
SGMS2-209ENST00000515332 STAG3Q9UJ98 1225 aa38.58■■■■□ 3.77
SGMS2-209ENST00000515332 VPS8Q8N3P4 1428 aa38.55■■■■□ 3.76
SGMS2-209ENST00000515332 RRP7BPQ9NSQ0 103 aa38.55■■■■□ 3.76
SGMS2-209ENST00000515332 ERBINQ96RT1 1412 aa38.54■■■■□ 3.76
SGMS2-209ENST00000515332 ROBO1Q9Y6N7 1651 aa38.53■■■■□ 3.76
SGMS2-209ENST00000515332 RBM33Q96EV2 1170 aaKnown RBP38.53■■■■□ 3.76
SGMS2-209ENST00000515332 KCNA6P17658 529 aa38.52■■■■□ 3.76
SGMS2-209ENST00000515332 MAP3K1Q13233 1512 aa38.5■■■■□ 3.75
SGMS2-209ENST00000515332 EFCAB6Q5THR3 1501 aa38.5■■■■□ 3.75
SGMS2-209ENST00000515332 PROSER2Q86WR7 435 aaPredicted RBP38.5■■■■□ 3.75
SGMS2-209ENST00000515332 SLC26A8Q96RN1 970 aa38.5■■■■□ 3.75
SGMS2-209ENST00000515332 IDI1Q13907 227 aa38.47■■■■□ 3.75
SGMS2-209ENST00000515332 ABCC5O15440 1437 aa38.46■■■■□ 3.75
SGMS2-209ENST00000515332 KANK1Q14678 1352 aa38.45■■■■□ 3.75
SGMS2-209ENST00000515332 CROCC2H7BZ55 1655 aa38.45■■■■□ 3.75
SGMS2-209ENST00000515332 TET3O43151 1660 aa38.45■■■■□ 3.75
SGMS2-209ENST00000515332 KDM5AP29375 1690 aaKnown RBP38.43■■■■□ 3.74
SGMS2-209ENST00000515332 NKTRP30414 1462 aaKnown RBP38.35■■■■□ 3.73
SGMS2-209ENST00000515332 LMTK2Q8IWU2 1503 aa38.35■■■■□ 3.73
SGMS2-209ENST00000515332 NWD1Q149M9 1564 aa38.35■■■■□ 3.73
SGMS2-209ENST00000515332 SETD1AO15047 1707 aaKnown RBP38.35■■■■□ 3.73
SGMS2-209ENST00000515332 PTPN23Q9H3S7 1636 aa38.34■■■■□ 3.73
SGMS2-209ENST00000515332 DAPK1P53355 1430 aa38.34■■■■□ 3.73
SGMS2-209ENST00000515332 MSH6P52701 1360 aa38.33■■■■□ 3.73
SGMS2-209ENST00000515332 BCANQ96GW7 911 aa38.33■■■■□ 3.73
SGMS2-209ENST00000515332 ADGRB3O60242 1522 aa38.32■■■■□ 3.72
SGMS2-209ENST00000515332 SLAIN2Q9P270 581 aa38.31■■■■□ 3.72
SGMS2-209ENST00000515332 PHLPP1O60346 1717 aa38.31■■■■□ 3.72
SGMS2-209ENST00000515332 NOS1P29475 1434 aa38.29■■■■□ 3.72
SGMS2-209ENST00000515332 CHIC2Q9UKJ5 165 aa38.28■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms