RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
CAST-243ENST00000515160 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
CAST-243ENST00000515160 ZNF316A6NFI3 1004 aaPredicted RBP10.26□□□□□ -0.77
CAST-243ENST00000515160 GPR37O15354 613 aa10.26□□□□□ -0.77
CAST-243ENST00000515160 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
CAST-243ENST00000515160 PODXL2Q9NZ53 605 aa10.25□□□□□ -0.77
CAST-243ENST00000515160 FOXK1P85037 733 aa10.24□□□□□ -0.77
CAST-243ENST00000515160 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
CAST-243ENST00000515160 DDRGK1Q96HY6 314 aa10.24□□□□□ -0.77
CAST-243ENST00000515160 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
CAST-243ENST00000515160 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
CAST-243ENST00000515160 NUTM2FA1L443 756 aa10.22□□□□□ -0.77
CAST-243ENST00000515160 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
CAST-243ENST00000515160 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.77
CAST-243ENST00000515160 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
CAST-243ENST00000515160 PLA2G2EQ9NZK7 142 aa10.21□□□□□ -0.77
CAST-243ENST00000515160 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
CAST-243ENST00000515160 IRF6O14896 467 aa10.19□□□□□ -0.78
CAST-243ENST00000515160 AMHR2Q16671 573 aa10.19□□□□□ -0.78
CAST-243ENST00000515160 GPR153Q6NV75 609 aa10.19□□□□□ -0.78
CAST-243ENST00000515160 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
CAST-243ENST00000515160 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
CAST-243ENST00000515160 FLIIQ13045 1269 aa10.18□□□□□ -0.78
CAST-243ENST00000515160 PLPP6Q8IY26 295 aa10.18□□□□□ -0.78
CAST-243ENST00000515160 ARID3AQ99856 593 aa10.18□□□□□ -0.78
CAST-243ENST00000515160 GNPATO15228 680 aa10.16□□□□□ -0.78
CAST-243ENST00000515160 PARP9Q8IXQ6 854 aa10.16□□□□□ -0.78
CAST-243ENST00000515160 MYO15BQ96JP2 1530 aa10.14□□□□□ -0.79
CAST-243ENST00000515160 FCHSD2O94868 740 aa10.14□□□□□ -0.79
CAST-243ENST00000515160 LSM11P83369 360 aaKnown RBP eCLIP10.14□□□□□ -0.79
CAST-243ENST00000515160 HIC1Q14526 733 aa10.14□□□□□ -0.79
CAST-243ENST00000515160 OSBPP22059 807 aa10.13□□□□□ -0.79
CAST-243ENST00000515160 GOPCQ9HD26 462 aa10.13□□□□□ -0.79
CAST-243ENST00000515160 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
CAST-243ENST00000515160 C1orf115Q9H7X2 142 aa10.12□□□□□ -0.79
CAST-243ENST00000515160 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
CAST-243ENST00000515160 ARSIQ5FYB1 569 aa10.11□□□□□ -0.79
CAST-243ENST00000515160 HCSTQ9UBK5 93 aa10.11□□□□□ -0.79
CAST-243ENST00000515160 APBB1O00213 710 aa10.1□□□□□ -0.79
CAST-243ENST00000515160 PBX2P40425 430 aa10.1□□□□□ -0.79
CAST-243ENST00000515160 TMEM92Q6UXU6 159 aa10.1□□□□□ -0.79
CAST-243ENST00000515160 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
CAST-243ENST00000515160 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
CAST-243ENST00000515160 SHROOM4Q9ULL8 1493 aa10.09□□□□□ -0.79
CAST-243ENST00000515160 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
CAST-243ENST00000515160 KIF3CO14782 793 aa10.08□□□□□ -0.8
CAST-243ENST00000515160 FECHP22830 423 aa10.08□□□□□ -0.8
CAST-243ENST00000515160 UPF1Q92900 1129 aaKnown RBP eCLIP10.07□□□□□ -0.8
CAST-243ENST00000515160 PCMTD1Q96MG8 357 aaPredicted RBP10.07□□□□□ -0.8
CAST-243ENST00000515160 DDX12PQ92771 950 aa10.06□□□□□ -0.8
CAST-243ENST00000515160 TBC1D12O60347 775 aa10.05□□□□□ -0.8
CAST-243ENST00000515160 RANGAP1P46060 587 aaPredicted RBP10.05□□□□□ -0.8
CAST-243ENST00000515160 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
CAST-243ENST00000515160 GIGYF2Q6Y7W6 1299 aaKnown RBP10.04□□□□□ -0.8
CAST-243ENST00000515160 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
CAST-243ENST00000515160 A6NJR5 290 aa10.03□□□□□ -0.8
CAST-243ENST00000515160 PTGDRQ13258 359 aa10.03□□□□□ -0.8
CAST-243ENST00000515160 MS4A1P11836 297 aa10.01□□□□□ -0.81
CAST-243ENST00000515160 HRCP23327 699 aa10.01□□□□□ -0.81
CAST-243ENST00000515160 TRAK2O60296 914 aa9.99□□□□□ -0.81
CAST-243ENST00000515160 EVI5O60447 810 aa9.99□□□□□ -0.81
CAST-243ENST00000515160 KHSRPQ92945 711 aaKnown RBP eCLIP9.99□□□□□ -0.81
CAST-243ENST00000515160 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
CAST-243ENST00000515160 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
CAST-243ENST00000515160 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
CAST-243ENST00000515160 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
CAST-243ENST00000515160 PDIA4P13667 645 aaKnown RBP9.96□□□□□ -0.82
CAST-243ENST00000515160 CLCN1P35523 988 aa9.96□□□□□ -0.82
CAST-243ENST00000515160 CCDC82Q8N4S0 544 aa9.95□□□□□ -0.82
CAST-243ENST00000515160 NUDT7P0C024 238 aa9.94□□□□□ -0.82
CAST-243ENST00000515160 MCM6Q14566 821 aa9.93□□□□□ -0.82
CAST-243ENST00000515160 GPCPD1Q9NPB8 672 aa9.93□□□□□ -0.82
CAST-243ENST00000515160 SKIV2LQ15477 1246 aaKnown RBP9.92□□□□□ -0.82
CAST-243ENST00000515160 ADGRD1Q6QNK2 874 aa9.92□□□□□ -0.82
CAST-243ENST00000515160 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
CAST-243ENST00000515160 AXIN2Q9Y2T1 843 aa9.92□□□□□ -0.82
CAST-243ENST00000515160 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
CAST-243ENST00000515160 PSDA5PKW4 1024 aaPredicted RBP9.91□□□□□ -0.82
CAST-243ENST00000515160 MDM2Q00987 491 aaPredicted RBP9.91□□□□□ -0.82
CAST-243ENST00000515160 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
CAST-243ENST00000515160 CUX2O14529 1486 aa9.91□□□□□ -0.82
CAST-243ENST00000515160 SSTR3P32745 418 aaPredicted RBP9.9□□□□□ -0.82
CAST-243ENST00000515160 LHX6Q9UPM6 363 aa9.9□□□□□ -0.82
CAST-243ENST00000515160 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
CAST-243ENST00000515160 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
CAST-243ENST00000515160 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
CAST-243ENST00000515160 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
CAST-243ENST00000515160 EPAS1Q99814 870 aa9.89□□□□□ -0.83
CAST-243ENST00000515160 IRX2Q9BZI1 471 aaPredicted RBP9.89□□□□□ -0.83
CAST-243ENST00000515160 CDHR5Q9HBB8 845 aa9.89□□□□□ -0.83
CAST-243ENST00000515160 NPDC1Q9NQX5 325 aaPredicted RBP9.89□□□□□ -0.83
CAST-243ENST00000515160 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
CAST-243ENST00000515160 RAD21O60216 631 aa9.88□□□□□ -0.83
CAST-243ENST00000515160 RGS20O76081 388 aa9.88□□□□□ -0.83
CAST-243ENST00000515160 PROSER2Q86WR7 435 aaPredicted RBP9.88□□□□□ -0.83
CAST-243ENST00000515160 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
CAST-243ENST00000515160 TK2O00142 265 aa9.87□□□□□ -0.83
CAST-243ENST00000515160 MAP3K7O43318 606 aa9.87□□□□□ -0.83
CAST-243ENST00000515160 PHF14O94880 888 aa9.87□□□□□ -0.83
CAST-243ENST00000515160 BEGAINQ9BUH8 593 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms