RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 FAM135AQ9P2D6 1515 aa16.55■□□□□ 0.24
DDR1-276ENST00000514534 HSPA1LP34931 641 aa16.54■□□□□ 0.24
DDR1-276ENST00000514534 NEURL4Q96JN8 1562 aa16.53■□□□□ 0.24
DDR1-276ENST00000514534 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
DDR1-276ENST00000514534 SHANK2Q9UPX8 1470 aa16.53■□□□□ 0.24
DDR1-276ENST00000514534 DHX29Q7Z478 1369 aaKnown RBP16.52■□□□□ 0.24
DDR1-276ENST00000514534 TNRQ92752 1358 aa16.52■□□□□ 0.24
DDR1-276ENST00000514534 TIAM1Q13009 1591 aa16.51■□□□□ 0.23
DDR1-276ENST00000514534 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
DDR1-276ENST00000514534 PZPP20742 1482 aa16.51■□□□□ 0.23
DDR1-276ENST00000514534 MBD5Q9P267 1494 aa16.51■□□□□ 0.23
DDR1-276ENST00000514534 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
DDR1-276ENST00000514534 ANKLE2Q86XL3 938 aa16.5■□□□□ 0.23
DDR1-276ENST00000514534 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
DDR1-276ENST00000514534 KIF3BO15066 747 aa16.48■□□□□ 0.23
DDR1-276ENST00000514534 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
DDR1-276ENST00000514534 ZNF644Q9H582 1327 aaPredicted RBP16.47■□□□□ 0.23
DDR1-276ENST00000514534 DEPDC5O75140 1603 aa16.47■□□□□ 0.23
DDR1-276ENST00000514534 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
DDR1-276ENST00000514534 UGGT1Q9NYU2 1555 aa16.47■□□□□ 0.23
DDR1-276ENST00000514534 WASHC2CQ9Y4E1 1318 aa16.46■□□□□ 0.23
DDR1-276ENST00000514534 FOXD1Q16676 465 aa16.46■□□□□ 0.23
DDR1-276ENST00000514534 RSPH4AQ5TD94 716 aa16.46■□□□□ 0.23
DDR1-276ENST00000514534 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.23
DDR1-276ENST00000514534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDR1-276ENST00000514534 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
DDR1-276ENST00000514534 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
DDR1-276ENST00000514534 MED14O60244 1454 aa16.45■□□□□ 0.22
DDR1-276ENST00000514534 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
DDR1-276ENST00000514534 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
DDR1-276ENST00000514534 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
DDR1-276ENST00000514534 SYNMO15061 1565 aa16.4■□□□□ 0.22
DDR1-276ENST00000514534 RNF17Q9BXT8 1623 aaKnown RBP16.4■□□□□ 0.22
DDR1-276ENST00000514534 ALKQ9UM73 1620 aa16.4■□□□□ 0.22
DDR1-276ENST00000514534 CAMSAP2Q08AD1 1489 aa16.4■□□□□ 0.22
DDR1-276ENST00000514534 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
DDR1-276ENST00000514534 ARHGEF5Q12774 1597 aa16.38■□□□□ 0.21
DDR1-276ENST00000514534 STRCP1A6NGW2 1772 aa16.37■□□□□ 0.21
DDR1-276ENST00000514534 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
DDR1-276ENST00000514534 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
DDR1-276ENST00000514534 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
DDR1-276ENST00000514534 LRRC7Q96NW7 1537 aa16.36■□□□□ 0.21
DDR1-276ENST00000514534 EIF2AK4Q9P2K8 1649 aaKnown RBP16.34■□□□□ 0.21
DDR1-276ENST00000514534 ABCC3O15438 1527 aa16.33■□□□□ 0.2
DDR1-276ENST00000514534 ERVK-7P63135 1459 aa16.31■□□□□ 0.2
DDR1-276ENST00000514534 CFAP65Q6ZU64 1925 aaKnown RBP16.31■□□□□ 0.2
DDR1-276ENST00000514534 UBR1Q8IWV7 1749 aa16.31■□□□□ 0.2
DDR1-276ENST00000514534 MAST1Q9Y2H9 1570 aa16.3■□□□□ 0.2
DDR1-276ENST00000514534 SCAF11Q99590 1463 aaKnown RBP16.29■□□□□ 0.2
DDR1-276ENST00000514534 CEP152O94986 1710 aa16.28■□□□□ 0.2
DDR1-276ENST00000514534 SLIT1O75093 1534 aa16.25■□□□□ 0.19
DDR1-276ENST00000514534 XIRP1Q702N8 1843 aaKnown RBP16.25■□□□□ 0.19
DDR1-276ENST00000514534 MROH1Q8NDA8 1641 aa16.25■□□□□ 0.19
DDR1-276ENST00000514534 ARHGAP23Q9P227 1491 aa16.24■□□□□ 0.19
DDR1-276ENST00000514534 TXNDC2Q86VQ3 553 aa16.24■□□□□ 0.19
DDR1-276ENST00000514534 EID1Q9Y6B2 187 aa16.23■□□□□ 0.19
DDR1-276ENST00000514534 RGS17Q9UGC6 210 aaPredicted RBP16.22■□□□□ 0.19
DDR1-276ENST00000514534 DUOX2Q9NRD8 1548 aa16.22■□□□□ 0.19
DDR1-276ENST00000514534 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
DDR1-276ENST00000514534 LTKP29376 864 aa16.21■□□□□ 0.19
DDR1-276ENST00000514534 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
DDR1-276ENST00000514534 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
DDR1-276ENST00000514534 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
DDR1-276ENST00000514534 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
DDR1-276ENST00000514534 MYOM3Q5VTT5 1437 aa16.18■□□□□ 0.18
DDR1-276ENST00000514534 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
DDR1-276ENST00000514534 STAG3Q9UJ98 1225 aa16.17■□□□□ 0.18
DDR1-276ENST00000514534 TMEM2Q9UHN6 1383 aa16.16■□□□□ 0.18
DDR1-276ENST00000514534 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
DDR1-276ENST00000514534 ROBO1Q9Y6N7 1651 aa16.15■□□□□ 0.18
DDR1-276ENST00000514534 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
DDR1-276ENST00000514534 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.17
DDR1-276ENST00000514534 KANK1Q14678 1352 aa16.13■□□□□ 0.17
DDR1-276ENST00000514534 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
DDR1-276ENST00000514534 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
DDR1-276ENST00000514534 KCNA6P17658 529 aa16.13■□□□□ 0.17
DDR1-276ENST00000514534 CROCC2H7BZ55 1655 aa16.13■□□□□ 0.17
DDR1-276ENST00000514534 POTEAQ6S8J7 498 aa16.12■□□□□ 0.17
DDR1-276ENST00000514534 MAP3K1Q13233 1512 aa16.12■□□□□ 0.17
DDR1-276ENST00000514534 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
DDR1-276ENST00000514534 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
DDR1-276ENST00000514534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDR1-276ENST00000514534 NWD1Q149M9 1564 aa16.09■□□□□ 0.17
DDR1-276ENST00000514534 TET3O43151 1660 aa16.08■□□□□ 0.17
DDR1-276ENST00000514534 MSH6P52701 1360 aa16.08■□□□□ 0.16
DDR1-276ENST00000514534 PHLPP1O60346 1717 aa16.08■□□□□ 0.16
DDR1-276ENST00000514534 IDI1Q13907 227 aa16.07■□□□□ 0.16
DDR1-276ENST00000514534 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
DDR1-276ENST00000514534 ABCC5O15440 1437 aa16.07■□□□□ 0.16
DDR1-276ENST00000514534 LMTK2Q8IWU2 1503 aa16.07■□□□□ 0.16
DDR1-276ENST00000514534 PTPN23Q9H3S7 1636 aa16.06■□□□□ 0.16
DDR1-276ENST00000514534 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
DDR1-276ENST00000514534 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
DDR1-276ENST00000514534 ADGRB3O60242 1522 aa16.05■□□□□ 0.16
DDR1-276ENST00000514534 JCADQ9P266 1359 aa16.05■□□□□ 0.16
DDR1-276ENST00000514534 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
DDR1-276ENST00000514534 DAPK1P53355 1430 aa16.03■□□□□ 0.16
DDR1-276ENST00000514534 RBM33Q96EV2 1170 aaKnown RBP16.03■□□□□ 0.16
DDR1-276ENST00000514534 BCANQ96GW7 911 aa16.03■□□□□ 0.16
DDR1-276ENST00000514534 SLC52A1Q9NWF4 448 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms