RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 SYCP2Q9BX26 1530 aa25.1■■□□□ 1.61
SNCAIP-220ENST00000514497 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
SNCAIP-220ENST00000514497 PKD2Q13563 968 aa25.09■■□□□ 1.61
SNCAIP-220ENST00000514497 CROCC2H7BZ55 1655 aa25.09■■□□□ 1.61
SNCAIP-220ENST00000514497 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
SNCAIP-220ENST00000514497 DAPK1P53355 1430 aa25.08■■□□□ 1.61
SNCAIP-220ENST00000514497 PLA2R1Q13018 1463 aa25.08■■□□□ 1.6
SNCAIP-220ENST00000514497 ZNF142P52746 1687 aaPredicted RBP25.07■■□□□ 1.6
SNCAIP-220ENST00000514497 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
SNCAIP-220ENST00000514497 ABCC5O15440 1437 aa25.06■■□□□ 1.6
SNCAIP-220ENST00000514497 MYO3AQ8NEV4 1616 aa25.05■■□□□ 1.6
SNCAIP-220ENST00000514497 HNRNPMP52272 730 aaKnown RBP eCLIP25.05■■□□□ 1.6
SNCAIP-220ENST00000514497 ZMYM3Q14202 1370 aa25.05■■□□□ 1.6
SNCAIP-220ENST00000514497 KIDINS220Q9ULH0 1771 aa25.04■■□□□ 1.6
SNCAIP-220ENST00000514497 TSPY4P0CV99 314 aa25.04■■□□□ 1.6
SNCAIP-220ENST00000514497 TSPY10P0CW01 314 aa25.04■■□□□ 1.6
SNCAIP-220ENST00000514497 MAST1Q9Y2H9 1570 aa25.03■■□□□ 1.6
SNCAIP-220ENST00000514497 TOM1O60784 492 aa25.03■■□□□ 1.6
SNCAIP-220ENST00000514497 PPP6R1Q9UPN7 881 aa25.02■■□□□ 1.6
SNCAIP-220ENST00000514497 CEP170BQ9Y4F5 1589 aaPredicted RBP25.01■■□□□ 1.59
SNCAIP-220ENST00000514497 ADGBQ8N7X0 1667 aa25.01■■□□□ 1.59
SNCAIP-220ENST00000514497 ROCK1Q13464 1354 aa25■■□□□ 1.59
SNCAIP-220ENST00000514497 RTEL1-TNFRSF6BF6WH68 1400 aa24.99■■□□□ 1.59
SNCAIP-220ENST00000514497 CLTCQ00610 1675 aaKnown RBP24.98■■□□□ 1.59
SNCAIP-220ENST00000514497 PCGF6Q9BYE7 350 aa24.98■■□□□ 1.59
SNCAIP-220ENST00000514497 ADGRL2O95490 1459 aa24.97■■□□□ 1.59
SNCAIP-220ENST00000514497 ITGAEP38570 1179 aa24.97■■□□□ 1.59
SNCAIP-220ENST00000514497 PTPRKQ15262 1439 aa24.96■■□□□ 1.59
SNCAIP-220ENST00000514497 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
SNCAIP-220ENST00000514497 CPS1P31327 1500 aa24.93■■□□□ 1.58
SNCAIP-220ENST00000514497 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
SNCAIP-220ENST00000514497 SPAG9O60271 1321 aaKnown RBP24.92■■□□□ 1.58
SNCAIP-220ENST00000514497 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
SNCAIP-220ENST00000514497 POLR1AO95602 1720 aaPredicted RBP24.89■■□□□ 1.58
SNCAIP-220ENST00000514497 HFM1A2PYH4 1435 aa24.89■■□□□ 1.58
SNCAIP-220ENST00000514497 ACIN1Q9UKV3 1341 aaKnown RBP24.88■■□□□ 1.57
SNCAIP-220ENST00000514497 ATP7AQ04656 1500 aa24.88■■□□□ 1.57
SNCAIP-220ENST00000514497 GCC2Q8IWJ2 1684 aa24.88■■□□□ 1.57
SNCAIP-220ENST00000514497 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
SNCAIP-220ENST00000514497 HRCP23327 699 aa24.84■■□□□ 1.57
SNCAIP-220ENST00000514497 SETD5Q9C0A6 1442 aa24.83■■□□□ 1.57
SNCAIP-220ENST00000514497 A2ML1A8K2U0 1454 aa24.83■■□□□ 1.56
SNCAIP-220ENST00000514497 NAIPQ13075 1403 aa24.82■■□□□ 1.56
SNCAIP-220ENST00000514497 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
SNCAIP-220ENST00000514497 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
SNCAIP-220ENST00000514497 NEURL4Q96JN8 1562 aa24.81■■□□□ 1.56
SNCAIP-220ENST00000514497 ALKQ9UM73 1620 aa24.81■■□□□ 1.56
SNCAIP-220ENST00000514497 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
SNCAIP-220ENST00000514497 GGT6Q6P531 493 aa24.79■■□□□ 1.56
SNCAIP-220ENST00000514497 RRP7BPQ9NSQ0 103 aa24.78■■□□□ 1.56
SNCAIP-220ENST00000514497 ERBINQ96RT1 1412 aa24.75■■□□□ 1.55
SNCAIP-220ENST00000514497 A2MP01023 1474 aa24.75■■□□□ 1.55
SNCAIP-220ENST00000514497 VWDEQ8N2E2 1590 aa24.75■■□□□ 1.55
SNCAIP-220ENST00000514497 ANKRD50Q9ULJ7 1429 aa24.74■■□□□ 1.55
SNCAIP-220ENST00000514497 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
SNCAIP-220ENST00000514497 RGS17Q9UGC6 210 aaPredicted RBP24.73■■□□□ 1.55
SNCAIP-220ENST00000514497 EIF2AK4Q9P2K8 1649 aaKnown RBP24.72■■□□□ 1.55
SNCAIP-220ENST00000514497 RAB3GAP2Q9H2M9 1393 aa24.7■■□□□ 1.55
SNCAIP-220ENST00000514497 ANKLE2Q86XL3 938 aa24.68■■□□□ 1.54
SNCAIP-220ENST00000514497 RNF17Q9BXT8 1623 aaKnown RBP24.65■■□□□ 1.54
SNCAIP-220ENST00000514497 TNRQ92752 1358 aa24.65■■□□□ 1.54
SNCAIP-220ENST00000514497 STRCP1A6NGW2 1772 aa24.63■■□□□ 1.53
SNCAIP-220ENST00000514497 NPHP4O75161 1426 aaPredicted RBP24.62■■□□□ 1.53
SNCAIP-220ENST00000514497 DEPDC5O75140 1603 aa24.61■■□□□ 1.53
SNCAIP-220ENST00000514497 FBXO31Q5XUX0 539 aaPredicted RBP24.61■■□□□ 1.53
SNCAIP-220ENST00000514497 LRRC7Q96NW7 1537 aa24.61■■□□□ 1.53
SNCAIP-220ENST00000514497 IQGAP1P46940 1657 aa24.6■■□□□ 1.53
SNCAIP-220ENST00000514497 UNC13BO14795 1591 aa24.6■■□□□ 1.53
SNCAIP-220ENST00000514497 MED14O60244 1454 aa24.6■■□□□ 1.53
SNCAIP-220ENST00000514497 SYNMO15061 1565 aa24.59■■□□□ 1.53
SNCAIP-220ENST00000514497 THEMISQ8N1K5 641 aaPredicted RBP24.59■■□□□ 1.53
SNCAIP-220ENST00000514497 KDM5DQ9BY66 1539 aa24.56■■□□□ 1.52
SNCAIP-220ENST00000514497 POTEAQ6S8J7 498 aa24.56■■□□□ 1.52
SNCAIP-220ENST00000514497 UGGT1Q9NYU2 1555 aa24.55■■□□□ 1.52
SNCAIP-220ENST00000514497 PZPP20742 1482 aa24.55■■□□□ 1.52
SNCAIP-220ENST00000514497 KIF3BO15066 747 aa24.54■■□□□ 1.52
SNCAIP-220ENST00000514497 FAM135AQ9P2D6 1515 aa24.54■■□□□ 1.52
SNCAIP-220ENST00000514497 PRDM15P57071 1507 aaPredicted RBP24.52■■□□□ 1.52
SNCAIP-220ENST00000514497 NLRP1Q9C000 1473 aa24.51■■□□□ 1.51
SNCAIP-220ENST00000514497 SETD1AO15047 1707 aaKnown RBP24.51■■□□□ 1.51
SNCAIP-220ENST00000514497 IQGAP3Q86VI3 1631 aa24.5■■□□□ 1.51
SNCAIP-220ENST00000514497 TRIM52Q96A61 297 aa24.5■■□□□ 1.51
SNCAIP-220ENST00000514497 KANK1Q14678 1352 aa24.5■■□□□ 1.51
SNCAIP-220ENST00000514497 NUP155O75694 1391 aa24.49■■□□□ 1.51
SNCAIP-220ENST00000514497 MROH1Q8NDA8 1641 aa24.48■■□□□ 1.51
SNCAIP-220ENST00000514497 ZC3H13Q5T200 1668 aaKnown RBP24.46■■□□□ 1.51
SNCAIP-220ENST00000514497 WASHC2CQ9Y4E1 1318 aa24.45■■□□□ 1.5
SNCAIP-220ENST00000514497 CLSPNQ9HAW4 1339 aa24.43■■□□□ 1.5
SNCAIP-220ENST00000514497 XIRP1Q702N8 1843 aaKnown RBP24.43■■□□□ 1.5
SNCAIP-220ENST00000514497 LMTK2Q8IWU2 1503 aa24.43■■□□□ 1.5
SNCAIP-220ENST00000514497 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
SNCAIP-220ENST00000514497 MPHOSPH9Q99550 1183 aa24.42■■□□□ 1.5
SNCAIP-220ENST00000514497 TET3O43151 1660 aa24.4■■□□□ 1.5
SNCAIP-220ENST00000514497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
SNCAIP-220ENST00000514497 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
SNCAIP-220ENST00000514497 FAM135BQ49AJ0 1406 aa24.36■■□□□ 1.49
SNCAIP-220ENST00000514497 CEP152O94986 1710 aa24.35■■□□□ 1.49
SNCAIP-220ENST00000514497 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
SNCAIP-220ENST00000514497 ABCC3O15438 1527 aa24.35■■□□□ 1.49
SNCAIP-220ENST00000514497 RPRD2Q5VT52 1461 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms