RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
NEDD9-214ENST00000513989 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
NEDD9-214ENST00000513989 PTPN23Q9H3S7 1636 aa15.26■□□□□ 0.03
NEDD9-214ENST00000513989 ESF1Q9H501 851 aaKnown RBP15.26■□□□□ 0.03
NEDD9-214ENST00000513989 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
NEDD9-214ENST00000513989 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
NEDD9-214ENST00000513989 CHIC2Q9UKJ5 165 aa15.25■□□□□ 0.03
NEDD9-214ENST00000513989 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
NEDD9-214ENST00000513989 CCDC141Q6ZP82 1450 aa15.24■□□□□ 0.03
NEDD9-214ENST00000513989 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
NEDD9-214ENST00000513989 ABCC5O15440 1437 aa15.23■□□□□ 0.03
NEDD9-214ENST00000513989 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
NEDD9-214ENST00000513989 DAPK1P53355 1430 aa15.21■□□□□ 0.03
NEDD9-214ENST00000513989 GGT6Q6P531 493 aa15.21■□□□□ 0.03
NEDD9-214ENST00000513989 ANKRD30AQ9BXX3 1397 aa15.21■□□□□ 0.02
NEDD9-214ENST00000513989 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.02
NEDD9-214ENST00000513989 RRP7BPQ9NSQ0 103 aa15.2■□□□□ 0.02
NEDD9-214ENST00000513989 POLR1AO95602 1720 aaPredicted RBP15.2■□□□□ 0.02
NEDD9-214ENST00000513989 PLA2R1Q13018 1463 aa15.2■□□□□ 0.02
NEDD9-214ENST00000513989 PCGF6Q9BYE7 350 aa15.18■□□□□ 0.02
NEDD9-214ENST00000513989 MAST1Q9Y2H9 1570 aa15.18■□□□□ 0.02
NEDD9-214ENST00000513989 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
NEDD9-214ENST00000513989 FAM135AQ9P2D6 1515 aa15.17■□□□□ 0.02
NEDD9-214ENST00000513989 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
NEDD9-214ENST00000513989 ROCK1Q13464 1354 aa15.17■□□□□ 0.02
NEDD9-214ENST00000513989 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
NEDD9-214ENST00000513989 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
NEDD9-214ENST00000513989 A2ML1A8K2U0 1454 aa15.16■□□□□ 0.02
NEDD9-214ENST00000513989 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
NEDD9-214ENST00000513989 NEURL4Q96JN8 1562 aa15.15■□□□□ 0.02
NEDD9-214ENST00000513989 PZPP20742 1482 aa15.15■□□□□ 0.02
NEDD9-214ENST00000513989 MROH1Q8NDA8 1641 aa15.15■□□□□ 0.02
NEDD9-214ENST00000513989 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
NEDD9-214ENST00000513989 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
NEDD9-214ENST00000513989 SHANK2Q9UPX8 1470 aa15.14■□□□□ 0.01
NEDD9-214ENST00000513989 EIF2AK4Q9P2K8 1649 aaKnown RBP15.14■□□□□ 0.01
NEDD9-214ENST00000513989 CROCC2H7BZ55 1655 aa15.13■□□□□ 0.01
NEDD9-214ENST00000513989 CEP152O94986 1710 aa15.13■□□□□ 0.01
NEDD9-214ENST00000513989 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
NEDD9-214ENST00000513989 KIF3BO15066 747 aa15.12■□□□□ 0.01
NEDD9-214ENST00000513989 FBXO31Q5XUX0 539 aaPredicted RBP15.12■□□□□ 0.01
NEDD9-214ENST00000513989 ZNF335Q9H4Z2 1342 aaPredicted RBP15.12■□□□□ 0.01
NEDD9-214ENST00000513989 KIF15Q9NS87 1388 aa15.11■□□□□ 0.01
NEDD9-214ENST00000513989 ABCC3O15438 1527 aa15.1■□□□□ 0.01
NEDD9-214ENST00000513989 HRCP23327 699 aa15.09■□□□□ 0.01
NEDD9-214ENST00000513989 PKD2Q13563 968 aa15.09■□□□□ 0.01
NEDD9-214ENST00000513989 TNRQ92752 1358 aa15.09■□□□□ 0.01
NEDD9-214ENST00000513989 ADGRL2O95490 1459 aa15.08■□□□□ 0.01
NEDD9-214ENST00000513989 SPATA31D1Q6ZQQ2 1576 aa15.08■□□□□ 0
NEDD9-214ENST00000513989 SETD5Q9C0A6 1442 aa15.07■□□□□ 0
NEDD9-214ENST00000513989 DEPDC5O75140 1603 aa15.06■□□□□ 0
NEDD9-214ENST00000513989 STRCP1A6NGW2 1772 aa15.06■□□□□ 0
NEDD9-214ENST00000513989 WASHC2CQ9Y4E1 1318 aa15.06■□□□□ 0
NEDD9-214ENST00000513989 HFM1A2PYH4 1435 aa15.06■□□□□ 0
NEDD9-214ENST00000513989 ANKRD50Q9ULJ7 1429 aa15.06■□□□□ 0
NEDD9-214ENST00000513989 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
NEDD9-214ENST00000513989 UBR1Q8IWV7 1749 aa15.04■□□□□ -0
NEDD9-214ENST00000513989 UGGT1Q9NYU2 1555 aa15.04■□□□□ -0
NEDD9-214ENST00000513989 NLRP1Q9C000 1473 aa15.04■□□□□ -0
NEDD9-214ENST00000513989 TRIM52Q96A61 297 aa15.04■□□□□ -0
NEDD9-214ENST00000513989 IQGAP1P46940 1657 aa15.03■□□□□ -0
NEDD9-214ENST00000513989 PRDM15P57071 1507 aaPredicted RBP15.03■□□□□ -0
NEDD9-214ENST00000513989 DUOX2Q9NRD8 1548 aa15.03■□□□□ -0
NEDD9-214ENST00000513989 NAIPQ13075 1403 aa15.03■□□□□ -0
NEDD9-214ENST00000513989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
NEDD9-214ENST00000513989 ERVK-7P63135 1459 aa15.02■□□□□ -0
NEDD9-214ENST00000513989 MED14O60244 1454 aa15.01□□□□□ -0.01
NEDD9-214ENST00000513989 ERBINQ96RT1 1412 aa15.01□□□□□ -0.01
NEDD9-214ENST00000513989 ALKQ9UM73 1620 aa15.01□□□□□ -0.01
NEDD9-214ENST00000513989 KANK1Q14678 1352 aa15□□□□□ -0.01
NEDD9-214ENST00000513989 ILDR2Q71H61 639 aa14.99□□□□□ -0.01
NEDD9-214ENST00000513989 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
NEDD9-214ENST00000513989 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
NEDD9-214ENST00000513989 CPS1P31327 1500 aa14.98□□□□□ -0.01
NEDD9-214ENST00000513989 NPHP4O75161 1426 aaPredicted RBP14.97□□□□□ -0.01
NEDD9-214ENST00000513989 NUP155O75694 1391 aa14.97□□□□□ -0.01
NEDD9-214ENST00000513989 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
NEDD9-214ENST00000513989 XIRP1Q702N8 1843 aaKnown RBP14.96□□□□□ -0.01
NEDD9-214ENST00000513989 PIK3C2BO00750 1634 aa14.95□□□□□ -0.02
NEDD9-214ENST00000513989 ARHGAP31Q2M1Z3 1444 aa14.94□□□□□ -0.02
NEDD9-214ENST00000513989 ANKLE2Q86XL3 938 aa14.94□□□□□ -0.02
NEDD9-214ENST00000513989 THEMISQ8N1K5 641 aaPredicted RBP14.94□□□□□ -0.02
NEDD9-214ENST00000513989 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
NEDD9-214ENST00000513989 ARHGAP23Q9P227 1491 aa14.93□□□□□ -0.02
NEDD9-214ENST00000513989 SLIT1O75093 1534 aa14.92□□□□□ -0.02
NEDD9-214ENST00000513989 MPHOSPH9Q99550 1183 aa14.92□□□□□ -0.02
NEDD9-214ENST00000513989 SYNMO15061 1565 aa14.92□□□□□ -0.02
NEDD9-214ENST00000513989 KDM5AP29375 1690 aaKnown RBP14.92□□□□□ -0.02
NEDD9-214ENST00000513989 LMTK2Q8IWU2 1503 aa14.91□□□□□ -0.02
NEDD9-214ENST00000513989 MYO5BQ9ULV0 1848 aa14.89□□□□□ -0.03
NEDD9-214ENST00000513989 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
NEDD9-214ENST00000513989 SCAF11Q99590 1463 aaKnown RBP14.89□□□□□ -0.03
NEDD9-214ENST00000513989 EFCAB6Q5THR3 1501 aa14.87□□□□□ -0.03
NEDD9-214ENST00000513989 LTKP29376 864 aa14.86□□□□□ -0.03
NEDD9-214ENST00000513989 MED1Q15648 1581 aaPredicted RBP14.85□□□□□ -0.03
NEDD9-214ENST00000513989 HSPA1LP34931 641 aa14.85□□□□□ -0.03
NEDD9-214ENST00000513989 GCC2Q8IWJ2 1684 aa14.84□□□□□ -0.03
NEDD9-214ENST00000513989 NOS1P29475 1434 aa14.83□□□□□ -0.03
NEDD9-214ENST00000513989 SOCS7O14512 581 aa14.83□□□□□ -0.04
NEDD9-214ENST00000513989 PIP4K2BP78356 416 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms