RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 MLECQ14165 292 aa23.49■■□□□ 1.35
POLR2J3-218ENST00000513506 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
POLR2J3-218ENST00000513506 GGT6Q6P531 493 aa23.48■■□□□ 1.35
POLR2J3-218ENST00000513506 MROH1Q8NDA8 1641 aa23.48■■□□□ 1.35
POLR2J3-218ENST00000513506 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
POLR2J3-218ENST00000513506 PTPRMP28827 1452 aa23.46■■□□□ 1.35
POLR2J3-218ENST00000513506 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
POLR2J3-218ENST00000513506 VWDEQ8N2E2 1590 aa23.44■■□□□ 1.34
POLR2J3-218ENST00000513506 FER1L4A9Z1Z3 1794 aa23.4■■□□□ 1.34
POLR2J3-218ENST00000513506 LMTK2Q8IWU2 1503 aa23.4■■□□□ 1.34
POLR2J3-218ENST00000513506 MROH2AA6NES4 1674 aa23.4■■□□□ 1.34
POLR2J3-218ENST00000513506 ZMYM3Q14202 1370 aa23.4■■□□□ 1.34
POLR2J3-218ENST00000513506 ABCC3O15438 1527 aa23.39■■□□□ 1.34
POLR2J3-218ENST00000513506 WASHC2CQ9Y4E1 1318 aa23.39■■□□□ 1.34
POLR2J3-218ENST00000513506 ESF1Q9H501 851 aaKnown RBP23.39■■□□□ 1.33
POLR2J3-218ENST00000513506 GCC2Q8IWJ2 1684 aa23.38■■□□□ 1.33
POLR2J3-218ENST00000513506 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
POLR2J3-218ENST00000513506 UNC13BO14795 1591 aa23.37■■□□□ 1.33
POLR2J3-218ENST00000513506 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
POLR2J3-218ENST00000513506 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
POLR2J3-218ENST00000513506 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
POLR2J3-218ENST00000513506 KANK1Q14678 1352 aa23.36■■□□□ 1.33
POLR2J3-218ENST00000513506 HRCP23327 699 aa23.35■■□□□ 1.33
POLR2J3-218ENST00000513506 NPATQ14207 1427 aa23.34■■□□□ 1.33
POLR2J3-218ENST00000513506 SETD5Q9C0A6 1442 aa23.33■■□□□ 1.33
POLR2J3-218ENST00000513506 PZPP20742 1482 aa23.32■■□□□ 1.32
POLR2J3-218ENST00000513506 CLTCQ00610 1675 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-218ENST00000513506 TRIM26Q12899 539 aaPredicted RBP23.3■■□□□ 1.32
POLR2J3-218ENST00000513506 CEBPAP49715 358 aaPredicted RBP23.29■■□□□ 1.32
POLR2J3-218ENST00000513506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.29■■□□□ 1.32
POLR2J3-218ENST00000513506 C3P01024 1663 aa23.28■■□□□ 1.32
POLR2J3-218ENST00000513506 NUP155O75694 1391 aa23.28■■□□□ 1.32
POLR2J3-218ENST00000513506 IQGAP3Q86VI3 1631 aa23.27■■□□□ 1.32
POLR2J3-218ENST00000513506 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
POLR2J3-218ENST00000513506 EFCAB6Q5THR3 1501 aa23.25■■□□□ 1.31
POLR2J3-218ENST00000513506 CAMSAP1Q5T5Y3 1602 aa23.23■■□□□ 1.31
POLR2J3-218ENST00000513506 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
POLR2J3-218ENST00000513506 RAB3GAP2Q9H2M9 1393 aa23.23■■□□□ 1.31
POLR2J3-218ENST00000513506 SETD1BQ9UPS6 1966 aaKnown RBP23.23■■□□□ 1.31
POLR2J3-218ENST00000513506 TET3O43151 1660 aa23.22■■□□□ 1.31
POLR2J3-218ENST00000513506 SPATA31D1Q6ZQQ2 1576 aa23.21■■□□□ 1.31
POLR2J3-218ENST00000513506 CEP152O94986 1710 aa23.21■■□□□ 1.31
POLR2J3-218ENST00000513506 NOS1P29475 1434 aa23.2■■□□□ 1.3
POLR2J3-218ENST00000513506 FBXO31Q5XUX0 539 aaPredicted RBP23.2■■□□□ 1.3
POLR2J3-218ENST00000513506 ERVK-7P63135 1459 aa23.19■■□□□ 1.3
POLR2J3-218ENST00000513506 TNRQ92752 1358 aa23.16■■□□□ 1.3
POLR2J3-218ENST00000513506 PTPRTO14522 1441 aa23.14■■□□□ 1.29
POLR2J3-218ENST00000513506 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
POLR2J3-218ENST00000513506 NLRP1Q9C000 1473 aa23.13■■□□□ 1.29
POLR2J3-218ENST00000513506 UHRF1BP1Q6BDS2 1440 aa23.12■■□□□ 1.29
POLR2J3-218ENST00000513506 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
POLR2J3-218ENST00000513506 PREX1Q8TCU6 1659 aa23.1■■□□□ 1.29
POLR2J3-218ENST00000513506 MPHOSPH9Q99550 1183 aa23.1■■□□□ 1.29
POLR2J3-218ENST00000513506 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
POLR2J3-218ENST00000513506 SLC52A1Q9NWF4 448 aa23.1■■□□□ 1.29
POLR2J3-218ENST00000513506 E9PCH4 1651 aa23.09■■□□□ 1.29
POLR2J3-218ENST00000513506 A2ML1A8K2U0 1454 aa23.09■■□□□ 1.29
POLR2J3-218ENST00000513506 PKD2Q13563 968 aa23.07■■□□□ 1.28
POLR2J3-218ENST00000513506 PLPPR3Q6T4P5 718 aa23.07■■□□□ 1.28
POLR2J3-218ENST00000513506 SYNMO15061 1565 aa23.06■■□□□ 1.28
POLR2J3-218ENST00000513506 MYO3AQ8NEV4 1616 aa23.05■■□□□ 1.28
POLR2J3-218ENST00000513506 PLA2R1Q13018 1463 aa23.05■■□□□ 1.28
POLR2J3-218ENST00000513506 ZNF142P52746 1687 aaPredicted RBP23.04■■□□□ 1.28
POLR2J3-218ENST00000513506 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
POLR2J3-218ENST00000513506 IDI1Q13907 227 aa23.03■■□□□ 1.28
POLR2J3-218ENST00000513506 PIK3C2BO00750 1634 aa23.01■■□□□ 1.27
POLR2J3-218ENST00000513506 TRPM2O94759 1503 aa22.99■■□□□ 1.27
POLR2J3-218ENST00000513506 KDM5AP29375 1690 aaKnown RBP22.99■■□□□ 1.27
POLR2J3-218ENST00000513506 THEMISQ8N1K5 641 aaPredicted RBP22.98■■□□□ 1.27
POLR2J3-218ENST00000513506 UGGT1Q9NYU2 1555 aa22.96■■□□□ 1.27
POLR2J3-218ENST00000513506 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
POLR2J3-218ENST00000513506 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
POLR2J3-218ENST00000513506 ARHGAP23Q9P227 1491 aa22.93■■□□□ 1.26
POLR2J3-218ENST00000513506 ANKRD30BQ9BXX2 1392 aa22.93■■□□□ 1.26
POLR2J3-218ENST00000513506 HSPA2P54652 639 aa22.92■■□□□ 1.26
POLR2J3-218ENST00000513506 FOXD1Q16676 465 aa22.91■■□□□ 1.26
POLR2J3-218ENST00000513506 ADGRB3O60242 1522 aa22.91■■□□□ 1.26
POLR2J3-218ENST00000513506 SLIT1O75093 1534 aa22.91■■□□□ 1.26
POLR2J3-218ENST00000513506 UBR1Q8IWV7 1749 aa22.91■■□□□ 1.26
POLR2J3-218ENST00000513506 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
POLR2J3-218ENST00000513506 TMEM131LA2VDJ0 1609 aa22.89■■□□□ 1.25
POLR2J3-218ENST00000513506 TMEM2Q9UHN6 1383 aa22.89■■□□□ 1.25
POLR2J3-218ENST00000513506 NEURL4Q96JN8 1562 aa22.87■■□□□ 1.25
POLR2J3-218ENST00000513506 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
POLR2J3-218ENST00000513506 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
POLR2J3-218ENST00000513506 MED14O60244 1454 aa22.85■■□□□ 1.25
POLR2J3-218ENST00000513506 ANKLE2Q86XL3 938 aa22.84■■□□□ 1.25
POLR2J3-218ENST00000513506 DHX57Q6P158 1386 aaKnown RBP22.84■■□□□ 1.25
POLR2J3-218ENST00000513506 ZFYVE9O95405 1425 aa22.83■■□□□ 1.25
POLR2J3-218ENST00000513506 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
POLR2J3-218ENST00000513506 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
POLR2J3-218ENST00000513506 DMRT2Q9Y5R5 561 aa22.82■■□□□ 1.24
POLR2J3-218ENST00000513506 STRCQ7RTU9 1775 aa22.81■■□□□ 1.24
POLR2J3-218ENST00000513506 LTKP29376 864 aa22.8■■□□□ 1.24
POLR2J3-218ENST00000513506 RPGRIP1LQ68CZ1 1315 aa22.8■■□□□ 1.24
POLR2J3-218ENST00000513506 HDGFP51858 240 aaKnown RBP22.78■■□□□ 1.24
POLR2J3-218ENST00000513506 SCAF11Q99590 1463 aaKnown RBP22.78■■□□□ 1.24
POLR2J3-218ENST00000513506 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.77■■□□□ 1.24
POLR2J3-218ENST00000513506 EID1Q9Y6B2 187 aa22.77■■□□□ 1.24
POLR2J3-218ENST00000513506 NCKAP5LQ9HCH0 1330 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms