RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 UNC13BO14795 1591 aa15.39■□□□□ 0.05
LINC01550-203ENST00000512901 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
LINC01550-203ENST00000512901 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
LINC01550-203ENST00000512901 KDM5DQ9BY66 1539 aa15.36■□□□□ 0.05
LINC01550-203ENST00000512901 DEPDC5O75140 1603 aa15.36■□□□□ 0.05
LINC01550-203ENST00000512901 REREQ9P2R6 1566 aa15.36■□□□□ 0.05
LINC01550-203ENST00000512901 KANK1Q14678 1352 aa15.36■□□□□ 0.05
LINC01550-203ENST00000512901 BCORL1Q5H9F3 1711 aa15.36■□□□□ 0.05
LINC01550-203ENST00000512901 PZPP20742 1482 aa15.35■□□□□ 0.05
LINC01550-203ENST00000512901 GGT6Q6P531 493 aa15.34■□□□□ 0.05
LINC01550-203ENST00000512901 FAM135AQ9P2D6 1515 aa15.34■□□□□ 0.05
LINC01550-203ENST00000512901 RNF17Q9BXT8 1623 aaKnown RBP15.34■□□□□ 0.05
LINC01550-203ENST00000512901 IQGAP3Q86VI3 1631 aa15.33■□□□□ 0.05
LINC01550-203ENST00000512901 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
LINC01550-203ENST00000512901 CLSPNQ9HAW4 1339 aa15.32■□□□□ 0.04
LINC01550-203ENST00000512901 MROH1Q8NDA8 1641 aa15.32■□□□□ 0.04
LINC01550-203ENST00000512901 AGLP35573 1532 aa15.32■□□□□ 0.04
LINC01550-203ENST00000512901 PKD2Q13563 968 aa15.31■□□□□ 0.04
LINC01550-203ENST00000512901 ARID4BQ4LE39 1312 aaPredicted RBP15.3■□□□□ 0.04
LINC01550-203ENST00000512901 SIGLEC1Q9BZZ2 1709 aa15.29■□□□□ 0.04
LINC01550-203ENST00000512901 FOXD1Q16676 465 aa15.29■□□□□ 0.04
LINC01550-203ENST00000512901 VWDEQ8N2E2 1590 aa15.29■□□□□ 0.04
LINC01550-203ENST00000512901 CEP152O94986 1710 aa15.28■□□□□ 0.04
LINC01550-203ENST00000512901 MLECQ14165 292 aa15.27■□□□□ 0.04
LINC01550-203ENST00000512901 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.04
LINC01550-203ENST00000512901 TET3O43151 1660 aa15.27■□□□□ 0.03
LINC01550-203ENST00000512901 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
LINC01550-203ENST00000512901 ZC3H13Q5T200 1668 aaKnown RBP15.24■□□□□ 0.03
LINC01550-203ENST00000512901 ABCC3O15438 1527 aa15.24■□□□□ 0.03
LINC01550-203ENST00000512901 LMTK2Q8IWU2 1503 aa15.24■□□□□ 0.03
LINC01550-203ENST00000512901 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
LINC01550-203ENST00000512901 E9PCH4 1651 aa15.22■□□□□ 0.03
LINC01550-203ENST00000512901 SIN3AQ96ST3 1273 aa15.22■□□□□ 0.03
LINC01550-203ENST00000512901 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
LINC01550-203ENST00000512901 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
LINC01550-203ENST00000512901 ESF1Q9H501 851 aaKnown RBP15.22■□□□□ 0.03
LINC01550-203ENST00000512901 EFCAB6Q5THR3 1501 aa15.22■□□□□ 0.03
LINC01550-203ENST00000512901 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
LINC01550-203ENST00000512901 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
LINC01550-203ENST00000512901 SPHKAPQ2M3C7 1700 aa15.17■□□□□ 0.02
LINC01550-203ENST00000512901 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
LINC01550-203ENST00000512901 RPRD2Q5VT52 1461 aaKnown RBP15.17■□□□□ 0.02
LINC01550-203ENST00000512901 NPATQ14207 1427 aa15.16■□□□□ 0.02
LINC01550-203ENST00000512901 CCDC144AA2RUR9 1427 aa15.15■□□□□ 0.02
LINC01550-203ENST00000512901 ARHGAP31Q2M1Z3 1444 aa15.15■□□□□ 0.02
LINC01550-203ENST00000512901 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
LINC01550-203ENST00000512901 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
LINC01550-203ENST00000512901 CNTLNQ9NXG0 1405 aa15.14■□□□□ 0.01
LINC01550-203ENST00000512901 TRPM2O94759 1503 aa15.13■□□□□ 0.01
LINC01550-203ENST00000512901 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
LINC01550-203ENST00000512901 PTPRTO14522 1441 aa15.13■□□□□ 0.01
LINC01550-203ENST00000512901 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
LINC01550-203ENST00000512901 MROH2AA6NES4 1674 aa15.11■□□□□ 0.01
LINC01550-203ENST00000512901 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
LINC01550-203ENST00000512901 PREX1Q8TCU6 1659 aa15.1■□□□□ 0.01
LINC01550-203ENST00000512901 CLTCL1P53675 1640 aa15.09■□□□□ 0.01
LINC01550-203ENST00000512901 NOS1P29475 1434 aa15.08■□□□□ 0.01
LINC01550-203ENST00000512901 FBXO31Q5XUX0 539 aaPredicted RBP15.08■□□□□ 0
LINC01550-203ENST00000512901 MADDQ8WXG6 1647 aa15.08■□□□□ 0
LINC01550-203ENST00000512901 ERVK-7P63135 1459 aa15.08■□□□□ 0
LINC01550-203ENST00000512901 UGGT1Q9NYU2 1555 aa15.07■□□□□ 0
LINC01550-203ENST00000512901 SYNMO15061 1565 aa15.06■□□□□ 0
LINC01550-203ENST00000512901 RIMS1Q86UR5 1692 aaKnown RBP15.06■□□□□ 0
LINC01550-203ENST00000512901 KIF1BO60333 1816 aa15.06■□□□□ 0
LINC01550-203ENST00000512901 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
LINC01550-203ENST00000512901 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
LINC01550-203ENST00000512901 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
LINC01550-203ENST00000512901 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
LINC01550-203ENST00000512901 RGL3Q3MIN7 710 aa15.04■□□□□ -0
LINC01550-203ENST00000512901 C3P01024 1663 aa15.04■□□□□ -0
LINC01550-203ENST00000512901 CHGAP10645 457 aaKnown RBP15.04■□□□□ -0
LINC01550-203ENST00000512901 CEBPAP49715 358 aaPredicted RBP15.03■□□□□ -0
LINC01550-203ENST00000512901 SLC52A1Q9NWF4 448 aa15.03■□□□□ -0
LINC01550-203ENST00000512901 PIK3C2BO00750 1634 aa15.03■□□□□ -0
LINC01550-203ENST00000512901 TNRQ92752 1358 aa15.01□□□□□ -0.01
LINC01550-203ENST00000512901 PPP1R15AO75807 674 aaPredicted RBP15.01□□□□□ -0.01
LINC01550-203ENST00000512901 IDI1Q13907 227 aa15.01□□□□□ -0.01
LINC01550-203ENST00000512901 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
LINC01550-203ENST00000512901 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
LINC01550-203ENST00000512901 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
LINC01550-203ENST00000512901 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
LINC01550-203ENST00000512901 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
LINC01550-203ENST00000512901 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
LINC01550-203ENST00000512901 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
LINC01550-203ENST00000512901 MYO5BQ9ULV0 1848 aa14.95□□□□□ -0.02
LINC01550-203ENST00000512901 TMEM131LA2VDJ0 1609 aa14.94□□□□□ -0.02
LINC01550-203ENST00000512901 PTPRMP28827 1452 aa14.94□□□□□ -0.02
LINC01550-203ENST00000512901 NLRP1Q9C000 1473 aa14.94□□□□□ -0.02
LINC01550-203ENST00000512901 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
LINC01550-203ENST00000512901 STAC3Q96MF2 364 aa14.92□□□□□ -0.02
LINC01550-203ENST00000512901 IFT172Q9UG01 1749 aa14.91□□□□□ -0.02
LINC01550-203ENST00000512901 NBPF8Q3BBV2 869 aa14.91□□□□□ -0.02
LINC01550-203ENST00000512901 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
LINC01550-203ENST00000512901 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
LINC01550-203ENST00000512901 PPLO60437 1756 aa14.91□□□□□ -0.02
LINC01550-203ENST00000512901 A2ML1A8K2U0 1454 aa14.9□□□□□ -0.02
LINC01550-203ENST00000512901 SETD1BQ9UPS6 1966 aaKnown RBP14.9□□□□□ -0.02
LINC01550-203ENST00000512901 KDM5AP29375 1690 aaKnown RBP14.89□□□□□ -0.03
LINC01550-203ENST00000512901 UBR1Q8IWV7 1749 aa14.89□□□□□ -0.03
LINC01550-203ENST00000512901 PRAG1Q86YV5 1406 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms