RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 AK7Q96M32 723 aa12.88□□□□□ -0.35
RFC1-213ENST00000512275 GPR37O15354 613 aa12.87□□□□□ -0.35
RFC1-213ENST00000512275 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
RFC1-213ENST00000512275 OXER1Q8TDS5 423 aa12.81□□□□□ -0.36
RFC1-213ENST00000512275 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
RFC1-213ENST00000512275 KRI1Q8N9T8 703 aaKnown RBP12.79□□□□□ -0.36
RFC1-213ENST00000512275 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
RFC1-213ENST00000512275 TRIM66O15016 1216 aa12.77□□□□□ -0.37
RFC1-213ENST00000512275 PTGER2P43116 358 aa12.77□□□□□ -0.37
RFC1-213ENST00000512275 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
RFC1-213ENST00000512275 KDM4FA0A1W2PPD8 638 aa12.75□□□□□ -0.37
RFC1-213ENST00000512275 OSBPP22059 807 aa12.75□□□□□ -0.37
RFC1-213ENST00000512275 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
RFC1-213ENST00000512275 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
RFC1-213ENST00000512275 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
RFC1-213ENST00000512275 PBX2P40425 430 aa12.73□□□□□ -0.37
RFC1-213ENST00000512275 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
RFC1-213ENST00000512275 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
RFC1-213ENST00000512275 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
RFC1-213ENST00000512275 PDE4DQ08499 809 aa12.72□□□□□ -0.37
RFC1-213ENST00000512275 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
RFC1-213ENST00000512275 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
RFC1-213ENST00000512275 C14orf37Q86TY3 774 aa12.71□□□□□ -0.37
RFC1-213ENST00000512275 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
RFC1-213ENST00000512275 MAP2K5Q13163 448 aa12.69□□□□□ -0.38
RFC1-213ENST00000512275 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
RFC1-213ENST00000512275 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
RFC1-213ENST00000512275 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
RFC1-213ENST00000512275 TBC1D12O60347 775 aa12.67□□□□□ -0.38
RFC1-213ENST00000512275 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
RFC1-213ENST00000512275 DDX12PQ92771 950 aa12.67□□□□□ -0.38
RFC1-213ENST00000512275 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
RFC1-213ENST00000512275 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
RFC1-213ENST00000512275 EVI5O60447 810 aa12.66□□□□□ -0.38
RFC1-213ENST00000512275 GNPATO15228 680 aa12.65□□□□□ -0.38
RFC1-213ENST00000512275 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
RFC1-213ENST00000512275 HIC1Q14526 733 aa12.64□□□□□ -0.39
RFC1-213ENST00000512275 IRF6O14896 467 aa12.63□□□□□ -0.39
RFC1-213ENST00000512275 FCHSD2O94868 740 aa12.63□□□□□ -0.39
RFC1-213ENST00000512275 AMHR2Q16671 573 aa12.62□□□□□ -0.39
RFC1-213ENST00000512275 ANO8Q9HCE9 1232 aaPredicted RBP12.62□□□□□ -0.39
RFC1-213ENST00000512275 ARHGAP33O14559 1287 aa12.61□□□□□ -0.39
RFC1-213ENST00000512275 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
RFC1-213ENST00000512275 FECHP22830 423 aa12.6□□□□□ -0.39
RFC1-213ENST00000512275 PTGDRQ13258 359 aa12.59□□□□□ -0.39
RFC1-213ENST00000512275 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
RFC1-213ENST00000512275 PSEN2P49810 448 aa12.56□□□□□ -0.4
RFC1-213ENST00000512275 PARP9Q8IXQ6 854 aa12.56□□□□□ -0.4
RFC1-213ENST00000512275 ADGRD1Q6QNK2 874 aa12.55□□□□□ -0.4
RFC1-213ENST00000512275 FAM117AQ9C073 453 aa12.55□□□□□ -0.4
RFC1-213ENST00000512275 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
RFC1-213ENST00000512275 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
RFC1-213ENST00000512275 PHF14O94880 888 aa12.52□□□□□ -0.41
RFC1-213ENST00000512275 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
RFC1-213ENST00000512275 EPAS1Q99814 870 aa12.51□□□□□ -0.41
RFC1-213ENST00000512275 NPDC1Q9NQX5 325 aaPredicted RBP12.51□□□□□ -0.41
RFC1-213ENST00000512275 TK2O00142 265 aa12.5□□□□□ -0.41
RFC1-213ENST00000512275 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
RFC1-213ENST00000512275 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
RFC1-213ENST00000512275 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
RFC1-213ENST00000512275 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
RFC1-213ENST00000512275 FOSBP53539 338 aa12.47□□□□□ -0.41
RFC1-213ENST00000512275 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
RFC1-213ENST00000512275 HRO43593 1189 aa12.46□□□□□ -0.41
RFC1-213ENST00000512275 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
RFC1-213ENST00000512275 MAP3K7O43318 606 aa12.44□□□□□ -0.42
RFC1-213ENST00000512275 ARXQ96QS3 562 aa12.44□□□□□ -0.42
RFC1-213ENST00000512275 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
RFC1-213ENST00000512275 TYW1BQ6NUM6 668 aa12.43□□□□□ -0.42
RFC1-213ENST00000512275 CECR2Q9BXF3 1484 aa12.42□□□□□ -0.42
RFC1-213ENST00000512275 TTLL12Q14166 644 aaPredicted RBP12.42□□□□□ -0.42
RFC1-213ENST00000512275 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
RFC1-213ENST00000512275 TMUB1Q9BVT8 246 aa12.42□□□□□ -0.42
RFC1-213ENST00000512275 TSR1Q2NL82 804 aaKnown RBP12.41□□□□□ -0.42
RFC1-213ENST00000512275 GIGYF2Q6Y7W6 1299 aaKnown RBP12.41□□□□□ -0.42
RFC1-213ENST00000512275 REPIN1Q9BWE0 567 aaKnown RBP12.41□□□□□ -0.42
RFC1-213ENST00000512275 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
RFC1-213ENST00000512275 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
RFC1-213ENST00000512275 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
RFC1-213ENST00000512275 MS4A1P11836 297 aa12.39□□□□□ -0.43
RFC1-213ENST00000512275 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
RFC1-213ENST00000512275 PTPREP23469 700 aa12.38□□□□□ -0.43
RFC1-213ENST00000512275 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
RFC1-213ENST00000512275 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
RFC1-213ENST00000512275 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
RFC1-213ENST00000512275 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
RFC1-213ENST00000512275 STAC3Q96MF2 364 aa12.36□□□□□ -0.43
RFC1-213ENST00000512275 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
RFC1-213ENST00000512275 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
RFC1-213ENST00000512275 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
RFC1-213ENST00000512275 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
RFC1-213ENST00000512275 CLCN1P35523 988 aa12.34□□□□□ -0.43
RFC1-213ENST00000512275 KCTD12Q96CX2 325 aaKnown RBP12.34□□□□□ -0.43
RFC1-213ENST00000512275 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
RFC1-213ENST00000512275 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
RFC1-213ENST00000512275 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
RFC1-213ENST00000512275 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
RFC1-213ENST00000512275 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
RFC1-213ENST00000512275 ZMYND15Q9H091 742 aa12.31□□□□□ -0.44
RFC1-213ENST00000512275 MDM2Q00987 491 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms