RNA–Protein interactions for RNA: ENST00000512247.5

LNX1-208, Transcript of ligand of numb-protein X 1, humanhuman

TSL 3

Gene LNX1, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1-208ENST00000512247 KIAA1107Q9UPP5 1409 aa13.69□□□□□ -0.22
LNX1-208ENST00000512247 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
LNX1-208ENST00000512247 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
LNX1-208ENST00000512247 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
LNX1-208ENST00000512247 PLEKHH2Q8IVE3 1493 aa13.68□□□□□ -0.22
LNX1-208ENST00000512247 VWDEQ8N2E2 1590 aa13.68□□□□□ -0.22
LNX1-208ENST00000512247 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
LNX1-208ENST00000512247 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
LNX1-208ENST00000512247 FAM135AQ9P2D6 1515 aa13.67□□□□□ -0.22
LNX1-208ENST00000512247 ALKQ9UM73 1620 aa13.67□□□□□ -0.22
LNX1-208ENST00000512247 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
LNX1-208ENST00000512247 POLR1AO95602 1720 aaPredicted RBP13.66□□□□□ -0.22
LNX1-208ENST00000512247 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
LNX1-208ENST00000512247 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
LNX1-208ENST00000512247 LRRC7Q96NW7 1537 aa13.65□□□□□ -0.22
LNX1-208ENST00000512247 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.22
LNX1-208ENST00000512247 INO80Q9ULG1 1556 aaPredicted RBP13.65□□□□□ -0.22
LNX1-208ENST00000512247 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
LNX1-208ENST00000512247 PZPP20742 1482 aa13.63□□□□□ -0.23
LNX1-208ENST00000512247 MED14O60244 1454 aa13.62□□□□□ -0.23
LNX1-208ENST00000512247 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
LNX1-208ENST00000512247 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
LNX1-208ENST00000512247 MTUS2Q5JR59 1369 aa13.6□□□□□ -0.23
LNX1-208ENST00000512247 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
LNX1-208ENST00000512247 KDM5DQ9BY66 1539 aa13.59□□□□□ -0.23
LNX1-208ENST00000512247 DEPDC5O75140 1603 aa13.58□□□□□ -0.24
LNX1-208ENST00000512247 FYCO1Q9BQS8 1478 aa13.58□□□□□ -0.24
LNX1-208ENST00000512247 IQGAP1P46940 1657 aa13.58□□□□□ -0.24
LNX1-208ENST00000512247 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
LNX1-208ENST00000512247 TXNDC2Q86VQ3 553 aa13.57□□□□□ -0.24
LNX1-208ENST00000512247 SYNMO15061 1565 aa13.55□□□□□ -0.24
LNX1-208ENST00000512247 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
LNX1-208ENST00000512247 FAM135BQ49AJ0 1406 aa13.55□□□□□ -0.24
LNX1-208ENST00000512247 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
LNX1-208ENST00000512247 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
LNX1-208ENST00000512247 TSPY4P0CV99 314 aa13.53□□□□□ -0.24
LNX1-208ENST00000512247 TSPY10P0CW01 314 aa13.53□□□□□ -0.24
LNX1-208ENST00000512247 RBM33Q96EV2 1170 aaKnown RBP13.53□□□□□ -0.24
LNX1-208ENST00000512247 LTKP29376 864 aa13.52□□□□□ -0.25
LNX1-208ENST00000512247 TRIM52Q96A61 297 aa13.52□□□□□ -0.25
LNX1-208ENST00000512247 SCAF11Q99590 1463 aaKnown RBP13.52□□□□□ -0.25
LNX1-208ENST00000512247 MEX3CQ5U5Q3 659 aaKnown RBP13.51□□□□□ -0.25
LNX1-208ENST00000512247 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
LNX1-208ENST00000512247 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
LNX1-208ENST00000512247 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
LNX1-208ENST00000512247 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
LNX1-208ENST00000512247 RSPH4AQ5TD94 716 aa13.5□□□□□ -0.25
LNX1-208ENST00000512247 CCDC141Q6ZP82 1450 aa13.49□□□□□ -0.25
LNX1-208ENST00000512247 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
LNX1-208ENST00000512247 BCANQ96GW7 911 aa13.47□□□□□ -0.25
LNX1-208ENST00000512247 ERVK-7P63135 1459 aa13.47□□□□□ -0.25
LNX1-208ENST00000512247 TIAM1Q13009 1591 aa13.46□□□□□ -0.25
LNX1-208ENST00000512247 SLC26A8Q96RN1 970 aa13.46□□□□□ -0.25
LNX1-208ENST00000512247 JCADQ9P266 1359 aa13.45□□□□□ -0.26
LNX1-208ENST00000512247 LOC105371045A0A1W2PR82 267 aa13.45□□□□□ -0.26
LNX1-208ENST00000512247 KCNA6P17658 529 aa13.45□□□□□ -0.26
LNX1-208ENST00000512247 ZNF772Q68DY9 489 aaPredicted RBP13.45□□□□□ -0.26
LNX1-208ENST00000512247 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
LNX1-208ENST00000512247 ABCC3O15438 1527 aa13.44□□□□□ -0.26
LNX1-208ENST00000512247 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
LNX1-208ENST00000512247 CAMSAP2Q08AD1 1489 aa13.43□□□□□ -0.26
LNX1-208ENST00000512247 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
LNX1-208ENST00000512247 MSH6P52701 1360 aa13.43□□□□□ -0.26
LNX1-208ENST00000512247 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
LNX1-208ENST00000512247 RXRBP28702 533 aa13.42□□□□□ -0.26
LNX1-208ENST00000512247 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
LNX1-208ENST00000512247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
LNX1-208ENST00000512247 LRRC9Q6ZRR7 1453 aa13.41□□□□□ -0.26
LNX1-208ENST00000512247 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
LNX1-208ENST00000512247 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
LNX1-208ENST00000512247 TMEM2Q9UHN6 1383 aa13.4□□□□□ -0.26
LNX1-208ENST00000512247 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
LNX1-208ENST00000512247 SLIT1O75093 1534 aa13.39□□□□□ -0.27
LNX1-208ENST00000512247 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
LNX1-208ENST00000512247 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
LNX1-208ENST00000512247 NUTM2BA6NNL0 878 aaPredicted RBP13.38□□□□□ -0.27
LNX1-208ENST00000512247 NUTM2EB1AL46 878 aaPredicted RBP13.38□□□□□ -0.27
LNX1-208ENST00000512247 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
LNX1-208ENST00000512247 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
LNX1-208ENST00000512247 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
LNX1-208ENST00000512247 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
LNX1-208ENST00000512247 MAP3K1Q13233 1512 aa13.35□□□□□ -0.27
LNX1-208ENST00000512247 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
LNX1-208ENST00000512247 IDI1Q13907 227 aa13.34□□□□□ -0.27
LNX1-208ENST00000512247 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
LNX1-208ENST00000512247 LRP6O75581 1613 aa13.34□□□□□ -0.27
LNX1-208ENST00000512247 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
LNX1-208ENST00000512247 PPP1R15AO75807 674 aaPredicted RBP13.32□□□□□ -0.28
LNX1-208ENST00000512247 ATF3P18847 181 aa13.32□□□□□ -0.28
LNX1-208ENST00000512247 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
LNX1-208ENST00000512247 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
LNX1-208ENST00000512247 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
LNX1-208ENST00000512247 EFCAB6Q5THR3 1501 aa13.31□□□□□ -0.28
LNX1-208ENST00000512247 AFF2P51816 1311 aa13.31□□□□□ -0.28
LNX1-208ENST00000512247 KANK1Q14678 1352 aa13.31□□□□□ -0.28
LNX1-208ENST00000512247 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
LNX1-208ENST00000512247 FGD6Q6ZV73 1430 aa13.3□□□□□ -0.28
LNX1-208ENST00000512247 CEP152O94986 1710 aa13.3□□□□□ -0.28
LNX1-208ENST00000512247 PIK3C2BO00750 1634 aa13.3□□□□□ -0.28
LNX1-208ENST00000512247 FOXD1Q16676 465 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms