RNA–Protein interactions for RNA: ENST00000512042.1

SPOCK3-220, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-220ENST00000512042 KIAA1107Q9UPP5 1409 aa29.48■■■□□ 2.31
SPOCK3-220ENST00000512042 GPATCH8Q9UKJ3 1502 aaKnown RBP29.47■■■□□ 2.31
SPOCK3-220ENST00000512042 ANKLE2Q86XL3 938 aa29.47■■■□□ 2.31
SPOCK3-220ENST00000512042 INO80Q9ULG1 1556 aaPredicted RBP29.47■■■□□ 2.31
SPOCK3-220ENST00000512042 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.31
SPOCK3-220ENST00000512042 TNRQ92752 1358 aa29.45■■■□□ 2.31
SPOCK3-220ENST00000512042 ALKQ9UM73 1620 aa29.45■■■□□ 2.3
SPOCK3-220ENST00000512042 PLEKHH2Q8IVE3 1493 aa29.44■■■□□ 2.3
SPOCK3-220ENST00000512042 POLR1AO95602 1720 aaPredicted RBP29.44■■■□□ 2.3
SPOCK3-220ENST00000512042 FBXO31Q5XUX0 539 aaPredicted RBP29.43■■■□□ 2.3
SPOCK3-220ENST00000512042 CFDP1Q9UEE9 299 aaPredicted RBP29.43■■■□□ 2.3
SPOCK3-220ENST00000512042 VWDEQ8N2E2 1590 aa29.43■■■□□ 2.3
SPOCK3-220ENST00000512042 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
SPOCK3-220ENST00000512042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.41■■■□□ 2.3
SPOCK3-220ENST00000512042 EHBP1L1Q8N3D4 1523 aa29.4■■■□□ 2.3
SPOCK3-220ENST00000512042 THEMISQ8N1K5 641 aaPredicted RBP29.4■■■□□ 2.3
SPOCK3-220ENST00000512042 RGS17Q9UGC6 210 aaPredicted RBP29.38■■■□□ 2.29
SPOCK3-220ENST00000512042 NPHP4O75161 1426 aaPredicted RBP29.37■■■□□ 2.29
SPOCK3-220ENST00000512042 KANK4Q5T7N3 995 aaPredicted RBP29.36■■■□□ 2.29
SPOCK3-220ENST00000512042 CCNB3Q8WWL7 1395 aa29.33■■■□□ 2.29
SPOCK3-220ENST00000512042 MED14O60244 1454 aa29.33■■■□□ 2.29
SPOCK3-220ENST00000512042 ADGBQ8N7X0 1667 aa29.33■■■□□ 2.29
SPOCK3-220ENST00000512042 PZPP20742 1482 aa29.31■■■□□ 2.28
SPOCK3-220ENST00000512042 DHX29Q7Z478 1369 aaKnown RBP29.3■■■□□ 2.28
SPOCK3-220ENST00000512042 LRRC7Q96NW7 1537 aa29.29■■■□□ 2.28
SPOCK3-220ENST00000512042 MIA2Q96PC5 1412 aa29.28■■■□□ 2.28
SPOCK3-220ENST00000512042 KIF3BO15066 747 aa29.28■■■□□ 2.28
SPOCK3-220ENST00000512042 FAM135AQ9P2D6 1515 aa29.27■■■□□ 2.28
SPOCK3-220ENST00000512042 NLRP1Q9C000 1473 aa29.27■■■□□ 2.28
SPOCK3-220ENST00000512042 DEPDC5O75140 1603 aa29.27■■■□□ 2.28
SPOCK3-220ENST00000512042 UGGT1Q9NYU2 1555 aa29.26■■■□□ 2.28
SPOCK3-220ENST00000512042 WASHC2CQ9Y4E1 1318 aa29.26■■■□□ 2.27
SPOCK3-220ENST00000512042 RTEL1-TNFRSF6BF6WH68 1400 aa29.25■■■□□ 2.27
SPOCK3-220ENST00000512042 ZNF644Q9H582 1327 aaPredicted RBP29.24■■■□□ 2.27
SPOCK3-220ENST00000512042 KDM5DQ9BY66 1539 aa29.24■■■□□ 2.27
SPOCK3-220ENST00000512042 RNF17Q9BXT8 1623 aaKnown RBP29.23■■■□□ 2.27
SPOCK3-220ENST00000512042 NCOA2Q15596 1464 aa29.22■■■□□ 2.27
SPOCK3-220ENST00000512042 MBD5Q9P267 1494 aa29.2■■■□□ 2.26
SPOCK3-220ENST00000512042 IQGAP1P46940 1657 aa29.2■■■□□ 2.26
SPOCK3-220ENST00000512042 POTEAQ6S8J7 498 aa29.18■■■□□ 2.26
SPOCK3-220ENST00000512042 SYNMO15061 1565 aa29.18■■■□□ 2.26
SPOCK3-220ENST00000512042 STRCP1A6NGW2 1772 aa29.16■■■□□ 2.26
SPOCK3-220ENST00000512042 PPARGC1BQ86YN6 1023 aaKnown RBP29.12■■■□□ 2.25
SPOCK3-220ENST00000512042 MYOM3Q5VTT5 1437 aa29.06■■■□□ 2.24
SPOCK3-220ENST00000512042 FAM135BQ49AJ0 1406 aa29.04■■■□□ 2.24
SPOCK3-220ENST00000512042 RSPH4AQ5TD94 716 aa29.01■■■□□ 2.23
SPOCK3-220ENST00000512042 CCDC141Q6ZP82 1450 aa29.01■■■□□ 2.23
SPOCK3-220ENST00000512042 ZC3H13Q5T200 1668 aaKnown RBP28.99■■■□□ 2.23
SPOCK3-220ENST00000512042 SCAF11Q99590 1463 aaKnown RBP28.98■■■□□ 2.23
SPOCK3-220ENST00000512042 TXNDC2Q86VQ3 553 aa28.96■■■□□ 2.23
SPOCK3-220ENST00000512042 FGD6Q6ZV73 1430 aa28.95■■■□□ 2.23
SPOCK3-220ENST00000512042 LTKP29376 864 aa28.95■■■□□ 2.22
SPOCK3-220ENST00000512042 ERVK-7P63135 1459 aa28.95■■■□□ 2.22
SPOCK3-220ENST00000512042 ABCC3O15438 1527 aa28.92■■■□□ 2.22
SPOCK3-220ENST00000512042 TSPY4P0CV99 314 aa28.91■■■□□ 2.22
SPOCK3-220ENST00000512042 TSPY10P0CW01 314 aa28.91■■■□□ 2.22
SPOCK3-220ENST00000512042 CAMSAP2Q08AD1 1489 aa28.89■■■□□ 2.22
SPOCK3-220ENST00000512042 XIRP1Q702N8 1843 aaKnown RBP28.89■■■□□ 2.22
SPOCK3-220ENST00000512042 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
SPOCK3-220ENST00000512042 TMEM94Q12767 1356 aa28.88■■■□□ 2.21
SPOCK3-220ENST00000512042 RRBP1Q9P2E9 1410 aaKnown RBP28.87■■■□□ 2.21
SPOCK3-220ENST00000512042 ARHGAP23Q9P227 1491 aa28.87■■■□□ 2.21
SPOCK3-220ENST00000512042 UBR1Q8IWV7 1749 aa28.86■■■□□ 2.21
SPOCK3-220ENST00000512042 PTPN23Q9H3S7 1636 aa28.86■■■□□ 2.21
SPOCK3-220ENST00000512042 SETD1AO15047 1707 aaKnown RBP28.86■■■□□ 2.21
SPOCK3-220ENST00000512042 SLIT1O75093 1534 aa28.85■■■□□ 2.21
SPOCK3-220ENST00000512042 ROBO1Q9Y6N7 1651 aa28.82■■■□□ 2.2
SPOCK3-220ENST00000512042 UPF1Q92900 1129 aaKnown RBP eCLIP28.81■■■□□ 2.2
SPOCK3-220ENST00000512042 KCNA6P17658 529 aa28.8■■■□□ 2.2
SPOCK3-220ENST00000512042 FAM50AQ14320 339 aaKnown RBP28.79■■■□□ 2.2
SPOCK3-220ENST00000512042 PROSER2Q86WR7 435 aaPredicted RBP28.79■■■□□ 2.2
SPOCK3-220ENST00000512042 ARHGEF5Q12774 1597 aa28.78■■■□□ 2.2
SPOCK3-220ENST00000512042 JCADQ9P266 1359 aa28.76■■■□□ 2.2
SPOCK3-220ENST00000512042 RBM33Q96EV2 1170 aaKnown RBP28.76■■■□□ 2.19
SPOCK3-220ENST00000512042 TMEM2Q9UHN6 1383 aa28.75■■■□□ 2.19
SPOCK3-220ENST00000512042 SLAIN2Q9P270 581 aa28.71■■■□□ 2.19
SPOCK3-220ENST00000512042 STAG3Q9UJ98 1225 aa28.71■■■□□ 2.19
SPOCK3-220ENST00000512042 MROH1Q8NDA8 1641 aa28.71■■■□□ 2.19
SPOCK3-220ENST00000512042 EIF2AK4Q9P2K8 1649 aaKnown RBP28.7■■■□□ 2.19
SPOCK3-220ENST00000512042 SLC26A8Q96RN1 970 aa28.7■■■□□ 2.18
SPOCK3-220ENST00000512042 CFAP65Q6ZU64 1925 aaKnown RBP28.69■■■□□ 2.18
SPOCK3-220ENST00000512042 ZNF772Q68DY9 489 aaPredicted RBP28.69■■■□□ 2.18
SPOCK3-220ENST00000512042 TRIM52Q96A61 297 aa28.69■■■□□ 2.18
SPOCK3-220ENST00000512042 ARHGAP31Q2M1Z3 1444 aa28.69■■■□□ 2.18
SPOCK3-220ENST00000512042 MSH6P52701 1360 aa28.68■■■□□ 2.18
SPOCK3-220ENST00000512042 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
SPOCK3-220ENST00000512042 CEP152O94986 1710 aa28.66■■■□□ 2.18
SPOCK3-220ENST00000512042 MEX3CQ5U5Q3 659 aaKnown RBP28.65■■■□□ 2.18
SPOCK3-220ENST00000512042 PHLPP1O60346 1717 aa28.65■■■□□ 2.18
SPOCK3-220ENST00000512042 MAST1Q9Y2H9 1570 aa28.64■■■□□ 2.18
SPOCK3-220ENST00000512042 ABCC5O15440 1437 aa28.64■■■□□ 2.18
SPOCK3-220ENST00000512042 DAPK1P53355 1430 aa28.64■■■□□ 2.18
SPOCK3-220ENST00000512042 SPATA31A6Q5VVP1 1343 aa28.63■■■□□ 2.17
SPOCK3-220ENST00000512042 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
SPOCK3-220ENST00000512042 TRIM26Q12899 539 aaPredicted RBP28.62■■■□□ 2.17
SPOCK3-220ENST00000512042 PIK3C2BO00750 1634 aa28.61■■■□□ 2.17
SPOCK3-220ENST00000512042 TET3O43151 1660 aa28.6■■■□□ 2.17
SPOCK3-220ENST00000512042 LRP6O75581 1613 aa28.59■■■□□ 2.17
SPOCK3-220ENST00000512042 EFCAB6Q5THR3 1501 aa28.58■■■□□ 2.17
SPOCK3-220ENST00000512042 RXRBP28702 533 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms