RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 WASHC2CQ9Y4E1 1318 aa33.53■■■□□ 2.96
CDS1-202ENST00000511298 NPATQ14207 1427 aa33.52■■■□□ 2.96
CDS1-202ENST00000511298 MROH2AA6NES4 1674 aa33.52■■■□□ 2.96
CDS1-202ENST00000511298 ADGRL2O95490 1459 aa33.51■■■□□ 2.96
CDS1-202ENST00000511298 HSPA2P54652 639 aa33.51■■■□□ 2.95
CDS1-202ENST00000511298 PTPRKQ15262 1439 aa33.51■■■□□ 2.95
CDS1-202ENST00000511298 ERBINQ96RT1 1412 aa33.51■■■□□ 2.95
CDS1-202ENST00000511298 FAM135AQ9P2D6 1515 aa33.5■■■□□ 2.95
CDS1-202ENST00000511298 CLTCQ00610 1675 aaKnown RBP33.48■■■□□ 2.95
CDS1-202ENST00000511298 EIF2AK4Q9P2K8 1649 aaKnown RBP33.47■■■□□ 2.95
CDS1-202ENST00000511298 UHRF1BP1Q6BDS2 1440 aa33.46■■■□□ 2.95
CDS1-202ENST00000511298 KDM5DQ9BY66 1539 aa33.46■■■□□ 2.95
CDS1-202ENST00000511298 RNF17Q9BXT8 1623 aaKnown RBP33.45■■■□□ 2.95
CDS1-202ENST00000511298 RRBP1Q9P2E9 1410 aaKnown RBP33.42■■■□□ 2.94
CDS1-202ENST00000511298 SETD1BQ9UPS6 1966 aaKnown RBP33.4■■■□□ 2.94
CDS1-202ENST00000511298 FBXO31Q5XUX0 539 aaPredicted RBP33.4■■■□□ 2.94
CDS1-202ENST00000511298 PREX1Q8TCU6 1659 aa33.39■■■□□ 2.94
CDS1-202ENST00000511298 MROH1Q8NDA8 1641 aa33.39■■■□□ 2.93
CDS1-202ENST00000511298 ROCK1Q13464 1354 aa33.38■■■□□ 2.93
CDS1-202ENST00000511298 ABCC3O15438 1527 aa33.37■■■□□ 2.93
CDS1-202ENST00000511298 PZPP20742 1482 aa33.37■■■□□ 2.93
CDS1-202ENST00000511298 ITGAEP38570 1179 aa33.35■■■□□ 2.93
CDS1-202ENST00000511298 ANKRD50Q9ULJ7 1429 aa33.34■■■□□ 2.93
CDS1-202ENST00000511298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.33■■■□□ 2.93
CDS1-202ENST00000511298 PRDM15P57071 1507 aaPredicted RBP33.3■■■□□ 2.92
CDS1-202ENST00000511298 TNRQ92752 1358 aa33.28■■■□□ 2.92
CDS1-202ENST00000511298 KANK1Q14678 1352 aa33.27■■■□□ 2.92
CDS1-202ENST00000511298 DEPDC5O75140 1603 aa33.25■■■□□ 2.91
CDS1-202ENST00000511298 ZC3H13Q5T200 1668 aaKnown RBP33.25■■■□□ 2.91
CDS1-202ENST00000511298 ARHGAP31Q2M1Z3 1444 aa33.24■■■□□ 2.91
CDS1-202ENST00000511298 VWDEQ8N2E2 1590 aa33.21■■■□□ 2.91
CDS1-202ENST00000511298 LMTK2Q8IWU2 1503 aa33.19■■■□□ 2.9
CDS1-202ENST00000511298 A2ML1A8K2U0 1454 aa33.18■■■□□ 2.9
CDS1-202ENST00000511298 MYO3AQ8NEV4 1616 aa33.17■■■□□ 2.9
CDS1-202ENST00000511298 DMRT2Q9Y5R5 561 aa33.16■■■□□ 2.9
CDS1-202ENST00000511298 ERVK-7P63135 1459 aa33.16■■■□□ 2.9
CDS1-202ENST00000511298 SPATA31D1Q6ZQQ2 1576 aa33.15■■■□□ 2.9
CDS1-202ENST00000511298 CEP170BQ9Y4F5 1589 aaPredicted RBP33.15■■■□□ 2.9
CDS1-202ENST00000511298 CAMSAP1Q5T5Y3 1602 aa33.13■■■□□ 2.89
CDS1-202ENST00000511298 NLRP1Q9C000 1473 aa33.13■■■□□ 2.89
CDS1-202ENST00000511298 CEP152O94986 1710 aa33.13■■■□□ 2.89
CDS1-202ENST00000511298 ZNF142P52746 1687 aaPredicted RBP33.1■■■□□ 2.89
CDS1-202ENST00000511298 PLA2R1Q13018 1463 aa33.08■■■□□ 2.89
CDS1-202ENST00000511298 STRCQ7RTU9 1775 aa33.08■■■□□ 2.89
CDS1-202ENST00000511298 NCKAP5LQ9HCH0 1330 aa33.06■■■□□ 2.88
CDS1-202ENST00000511298 PTPRTO14522 1441 aa33.06■■■□□ 2.88
CDS1-202ENST00000511298 PKD2Q13563 968 aa33.06■■■□□ 2.88
CDS1-202ENST00000511298 THEMISQ8N1K5 641 aaPredicted RBP33.06■■■□□ 2.88
CDS1-202ENST00000511298 NAIPQ13075 1403 aa33.04■■■□□ 2.88
CDS1-202ENST00000511298 UNC13BO14795 1591 aa33.03■■■□□ 2.88
CDS1-202ENST00000511298 NUP155O75694 1391 aa33.02■■■□□ 2.88
CDS1-202ENST00000511298 EFCAB6Q5THR3 1501 aa33.01■■■□□ 2.87
CDS1-202ENST00000511298 NOS1P29475 1434 aa33■■■□□ 2.87
CDS1-202ENST00000511298 UGGT1Q9NYU2 1555 aa32.99■■■□□ 2.87
CDS1-202ENST00000511298 HFM1A2PYH4 1435 aa32.98■■■□□ 2.87
CDS1-202ENST00000511298 RPRD2Q5VT52 1461 aaKnown RBP32.97■■■□□ 2.87
CDS1-202ENST00000511298 IDI1Q13907 227 aa32.96■■■□□ 2.87
CDS1-202ENST00000511298 ANKLE2Q86XL3 938 aa32.94■■■□□ 2.86
CDS1-202ENST00000511298 SLC52A1Q9NWF4 448 aa32.92■■■□□ 2.86
CDS1-202ENST00000511298 TET3O43151 1660 aa32.91■■■□□ 2.86
CDS1-202ENST00000511298 IQGAP3Q86VI3 1631 aa32.89■■■□□ 2.86
CDS1-202ENST00000511298 SYNMO15061 1565 aa32.87■■■□□ 2.85
CDS1-202ENST00000511298 CFAP65Q6ZU64 1925 aaKnown RBP32.86■■■□□ 2.85
CDS1-202ENST00000511298 GCC2Q8IWJ2 1684 aa32.82■■■□□ 2.84
CDS1-202ENST00000511298 STAG3Q9UJ98 1225 aa32.82■■■□□ 2.84
CDS1-202ENST00000511298 CERKQ8TCT0 537 aa32.81■■■□□ 2.84
CDS1-202ENST00000511298 MED14O60244 1454 aa32.8■■■□□ 2.84
CDS1-202ENST00000511298 ARHGAP23Q9P227 1491 aa32.8■■■□□ 2.84
CDS1-202ENST00000511298 UBR1Q8IWV7 1749 aa32.79■■■□□ 2.84
CDS1-202ENST00000511298 NEURL4Q96JN8 1562 aa32.79■■■□□ 2.84
CDS1-202ENST00000511298 LTKP29376 864 aa32.78■■■□□ 2.84
CDS1-202ENST00000511298 TRIM52Q96A61 297 aa32.78■■■□□ 2.84
CDS1-202ENST00000511298 TMEM2Q9UHN6 1383 aa32.78■■■□□ 2.84
CDS1-202ENST00000511298 SLIT1O75093 1534 aa32.77■■■□□ 2.84
CDS1-202ENST00000511298 PIK3C2BO00750 1634 aa32.77■■■□□ 2.84
CDS1-202ENST00000511298 TXNDC2Q86VQ3 553 aa32.77■■■□□ 2.84
CDS1-202ENST00000511298 E9PCH4 1651 aa32.77■■■□□ 2.84
CDS1-202ENST00000511298 NPHP4O75161 1426 aaPredicted RBP32.76■■■□□ 2.83
CDS1-202ENST00000511298 ZNF335Q9H4Z2 1342 aaPredicted RBP32.74■■■□□ 2.83
CDS1-202ENST00000511298 ILDR1Q86SU0 546 aaPredicted RBP32.73■■■□□ 2.83
CDS1-202ENST00000511298 EID1Q9Y6B2 187 aa32.73■■■□□ 2.83
CDS1-202ENST00000511298 LTBP4Q8N2S1 1624 aa32.71■■■□□ 2.83
CDS1-202ENST00000511298 SCAF11Q99590 1463 aaKnown RBP32.71■■■□□ 2.83
CDS1-202ENST00000511298 KDM5AP29375 1690 aaKnown RBP32.7■■■□□ 2.83
CDS1-202ENST00000511298 FBXO41Q8TF61 875 aa32.69■■■□□ 2.82
CDS1-202ENST00000511298 ADGRB3O60242 1522 aa32.68■■■□□ 2.82
CDS1-202ENST00000511298 SLC4A1APQ9BWU0 796 aaKnown RBP32.67■■■□□ 2.82
CDS1-202ENST00000511298 POLR1AO95602 1720 aaPredicted RBP32.67■■■□□ 2.82
CDS1-202ENST00000511298 SETD5Q9C0A6 1442 aa32.66■■■□□ 2.82
CDS1-202ENST00000511298 ACIN1Q9UKV3 1341 aaKnown RBP32.63■■■□□ 2.81
CDS1-202ENST00000511298 CHGAP10645 457 aaKnown RBP32.61■■■□□ 2.81
CDS1-202ENST00000511298 ZFYVE9O95405 1425 aa32.59■■■□□ 2.81
CDS1-202ENST00000511298 TMEM131LA2VDJ0 1609 aa32.59■■■□□ 2.81
CDS1-202ENST00000511298 HDGFP51858 240 aaKnown RBP32.58■■■□□ 2.81
CDS1-202ENST00000511298 MPHOSPH9Q99550 1183 aa32.57■■■□□ 2.8
CDS1-202ENST00000511298 IQGAP1P46940 1657 aa32.56■■■□□ 2.8
CDS1-202ENST00000511298 RIMS2Q9UQ26 1411 aa32.55■■■□□ 2.8
CDS1-202ENST00000511298 RAB3GAP2Q9H2M9 1393 aa32.54■■■□□ 2.8
CDS1-202ENST00000511298 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.53■■■□□ 2.8
CDS1-202ENST00000511298 IQSEC2Q5JU85 1478 aa32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms