RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
HMGB1P47-201ENST00000511281 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
HMGB1P47-201ENST00000511281 REPIN1Q9BWE0 567 aaKnown RBP10.49□□□□□ -0.73
HMGB1P47-201ENST00000511281 PCDHGA10Q9Y5H3 936 aa10.49□□□□□ -0.73
HMGB1P47-201ENST00000511281 CLCN1P35523 988 aa10.48□□□□□ -0.73
HMGB1P47-201ENST00000511281 TYW1BQ6NUM6 668 aa10.48□□□□□ -0.73
HMGB1P47-201ENST00000511281 FBXW7Q969H0 707 aa10.48□□□□□ -0.73
HMGB1P47-201ENST00000511281 SH3D19Q5HYK7 790 aa10.47□□□□□ -0.73
HMGB1P47-201ENST00000511281 JPH4Q96JJ6 628 aa10.47□□□□□ -0.73
HMGB1P47-201ENST00000511281 MAP3K7O43318 606 aa10.46□□□□□ -0.73
HMGB1P47-201ENST00000511281 GPCPD1Q9NPB8 672 aa10.46□□□□□ -0.73
HMGB1P47-201ENST00000511281 PCDHGA4Q9Y5G9 962 aa10.46□□□□□ -0.73
HMGB1P47-201ENST00000511281 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
HMGB1P47-201ENST00000511281 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
HMGB1P47-201ENST00000511281 PCMTD1Q96MG8 357 aaPredicted RBP10.43□□□□□ -0.74
HMGB1P47-201ENST00000511281 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
HMGB1P47-201ENST00000511281 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
HMGB1P47-201ENST00000511281 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
HMGB1P47-201ENST00000511281 OATP04181 439 aa10.41□□□□□ -0.74
HMGB1P47-201ENST00000511281 FOSBP53539 338 aa10.41□□□□□ -0.74
HMGB1P47-201ENST00000511281 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
HMGB1P47-201ENST00000511281 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
HMGB1P47-201ENST00000511281 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
HMGB1P47-201ENST00000511281 A6NJR5 290 aa10.39□□□□□ -0.75
HMGB1P47-201ENST00000511281 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
HMGB1P47-201ENST00000511281 SKIV2LQ15477 1246 aaKnown RBP10.39□□□□□ -0.75
HMGB1P47-201ENST00000511281 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
HMGB1P47-201ENST00000511281 SSTR3P32745 418 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P47-201ENST00000511281 FAM217BQ9NTX9 383 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P47-201ENST00000511281 PXYLP1Q8TE99 480 aa10.37□□□□□ -0.75
HMGB1P47-201ENST00000511281 ADGRG1Q9Y653 693 aa10.37□□□□□ -0.75
HMGB1P47-201ENST00000511281 C6orf132Q5T0Z8 1188 aa10.35□□□□□ -0.75
HMGB1P47-201ENST00000511281 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
HMGB1P47-201ENST00000511281 MCM6Q14566 821 aa10.34□□□□□ -0.75
HMGB1P47-201ENST00000511281 PADI6Q6TGC4 694 aa10.34□□□□□ -0.75
HMGB1P47-201ENST00000511281 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
HMGB1P47-201ENST00000511281 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
HMGB1P47-201ENST00000511281 BEGAINQ9BUH8 593 aa10.33□□□□□ -0.76
HMGB1P47-201ENST00000511281 ZSWIM6Q9HCJ5 1215 aa10.32□□□□□ -0.76
HMGB1P47-201ENST00000511281 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMGB1P47-201ENST00000511281 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
HMGB1P47-201ENST00000511281 PRSS12P56730 875 aa10.29□□□□□ -0.76
HMGB1P47-201ENST00000511281 TRAK2O60296 914 aa10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 DIXDC1Q155Q3 683 aa10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 FAM161AQ3B820 660 aa10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 ADAM33Q9BZ11 813 aa10.28□□□□□ -0.76
HMGB1P47-201ENST00000511281 RBM46Q8TBY0 533 aaKnown RBP10.26□□□□□ -0.77
HMGB1P47-201ENST00000511281 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
HMGB1P47-201ENST00000511281 APBB1O00213 710 aa10.25□□□□□ -0.77
HMGB1P47-201ENST00000511281 GPR153Q6NV75 609 aa10.25□□□□□ -0.77
HMGB1P47-201ENST00000511281 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
HMGB1P47-201ENST00000511281 CLUAP1Q96AJ1 413 aa10.25□□□□□ -0.77
HMGB1P47-201ENST00000511281 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
HMGB1P47-201ENST00000511281 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
HMGB1P47-201ENST00000511281 TUSC1Q2TAM9 212 aa10.24□□□□□ -0.77
HMGB1P47-201ENST00000511281 BANK1Q8NDB2 785 aa10.24□□□□□ -0.77
HMGB1P47-201ENST00000511281 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
HMGB1P47-201ENST00000511281 RIMBP2O15034 1052 aa10.23□□□□□ -0.77
HMGB1P47-201ENST00000511281 NUDT7P0C024 238 aa10.23□□□□□ -0.77
HMGB1P47-201ENST00000511281 PSDA5PKW4 1024 aaPredicted RBP10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 PPP2R2DQ66LE6 453 aa10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 FNBP4Q8N3X1 1017 aaPredicted RBP10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 NLRP7Q8WX94 980 aa10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 EYA1Q99502 592 aa10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 TBC1D2Q9BYX2 928 aa10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
HMGB1P47-201ENST00000511281 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
HMGB1P47-201ENST00000511281 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
HMGB1P47-201ENST00000511281 SOCS7O14512 581 aa10.2□□□□□ -0.78
HMGB1P47-201ENST00000511281 PROSER2Q86WR7 435 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P47-201ENST00000511281 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
HMGB1P47-201ENST00000511281 CD46P15529 392 aa10.19□□□□□ -0.78
HMGB1P47-201ENST00000511281 KHSRPQ92945 711 aaKnown RBP eCLIP10.19□□□□□ -0.78
HMGB1P47-201ENST00000511281 RCCD1A6NED2 376 aa10.18□□□□□ -0.78
HMGB1P47-201ENST00000511281 POTEJP0CG39 1038 aa10.18□□□□□ -0.78
HMGB1P47-201ENST00000511281 GJA5P36382 358 aa10.18□□□□□ -0.78
HMGB1P47-201ENST00000511281 PPP4R3BQ5MIZ7 849 aa10.18□□□□□ -0.78
HMGB1P47-201ENST00000511281 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
HMGB1P47-201ENST00000511281 COL9A1P20849 921 aa10.17□□□□□ -0.78
HMGB1P47-201ENST00000511281 RFC5P40937 340 aa10.17□□□□□ -0.78
HMGB1P47-201ENST00000511281 TMEM259Q4ZIN3 620 aa10.17□□□□□ -0.78
HMGB1P47-201ENST00000511281 SPTLC1O15269 473 aa10.16□□□□□ -0.78
HMGB1P47-201ENST00000511281 SULF1Q8IWU6 871 aa10.16□□□□□ -0.78
HMGB1P47-201ENST00000511281 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
HMGB1P47-201ENST00000511281 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
HMGB1P47-201ENST00000511281 ARID3AQ99856 593 aa10.15□□□□□ -0.78
HMGB1P47-201ENST00000511281 LIMD1Q9UGP4 676 aa10.15□□□□□ -0.78
HMGB1P47-201ENST00000511281 TSKSQ9UJT2 592 aa10.15□□□□□ -0.78
HMGB1P47-201ENST00000511281 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
HMGB1P47-201ENST00000511281 RAD21O60216 631 aa10.14□□□□□ -0.79
HMGB1P47-201ENST00000511281 DNAJB2P25686 324 aa10.14□□□□□ -0.79
HMGB1P47-201ENST00000511281 COG6Q9Y2V7 657 aa10.14□□□□□ -0.79
HMGB1P47-201ENST00000511281 NBPF26B4DH59 902 aa10.13□□□□□ -0.79
HMGB1P47-201ENST00000511281 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P47-201ENST00000511281 RIC3Q7Z5B4 369 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 615.4 ms