RNA–Protein interactions for RNA: ENST00000511162.1

SERF1A-206, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-206ENST00000511162 ITGAEP38570 1179 aa33.29■■■□□ 2.92
SERF1A-206ENST00000511162 RNF17Q9BXT8 1623 aaKnown RBP33.28■■■□□ 2.92
SERF1A-206ENST00000511162 PLPPR3Q6T4P5 718 aa33.28■■■□□ 2.92
SERF1A-206ENST00000511162 PPP6R1Q9UPN7 881 aa33.28■■■□□ 2.92
SERF1A-206ENST00000511162 ROCK1Q13464 1354 aa33.26■■■□□ 2.92
SERF1A-206ENST00000511162 CEBPAP49715 358 aaPredicted RBP33.24■■■□□ 2.91
SERF1A-206ENST00000511162 FAM135AQ9P2D6 1515 aa33.23■■■□□ 2.91
SERF1A-206ENST00000511162 MROH2AA6NES4 1674 aa33.22■■■□□ 2.91
SERF1A-206ENST00000511162 CLTCQ00610 1675 aaKnown RBP33.22■■■□□ 2.91
SERF1A-206ENST00000511162 KDM5DQ9BY66 1539 aa33.22■■■□□ 2.91
SERF1A-206ENST00000511162 MROH1Q8NDA8 1641 aa33.21■■■□□ 2.91
SERF1A-206ENST00000511162 PREX1Q8TCU6 1659 aa33.2■■■□□ 2.9
SERF1A-206ENST00000511162 C3P01024 1663 aa33.19■■■□□ 2.9
SERF1A-206ENST00000511162 ZMYM3Q14202 1370 aa33.19■■■□□ 2.9
SERF1A-206ENST00000511162 ANKRD50Q9ULJ7 1429 aa33.19■■■□□ 2.9
SERF1A-206ENST00000511162 WASHC2CQ9Y4E1 1318 aa33.16■■■□□ 2.9
SERF1A-206ENST00000511162 PRDM15P57071 1507 aaPredicted RBP33.16■■■□□ 2.9
SERF1A-206ENST00000511162 ABCC3O15438 1527 aa33.13■■■□□ 2.89
SERF1A-206ENST00000511162 HSPA2P54652 639 aa33.13■■■□□ 2.89
SERF1A-206ENST00000511162 DEPDC5O75140 1603 aa33.13■■■□□ 2.89
SERF1A-206ENST00000511162 SETD1BQ9UPS6 1966 aaKnown RBP33.11■■■□□ 2.89
SERF1A-206ENST00000511162 ILDR1Q86SU0 546 aaPredicted RBP33.11■■■□□ 2.89
SERF1A-206ENST00000511162 ZC3H13Q5T200 1668 aaKnown RBP33.09■■■□□ 2.89
SERF1A-206ENST00000511162 NPATQ14207 1427 aa33.07■■■□□ 2.88
SERF1A-206ENST00000511162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.06■■■□□ 2.88
SERF1A-206ENST00000511162 KANK1Q14678 1352 aa33.04■■■□□ 2.88
SERF1A-206ENST00000511162 PZPP20742 1482 aa33.04■■■□□ 2.88
SERF1A-206ENST00000511162 VWDEQ8N2E2 1590 aa33.02■■■□□ 2.88
SERF1A-206ENST00000511162 CEP152O94986 1710 aa33.01■■■□□ 2.87
SERF1A-206ENST00000511162 NAIPQ13075 1403 aa33■■■□□ 2.87
SERF1A-206ENST00000511162 UHRF1BP1Q6BDS2 1440 aa33■■■□□ 2.87
SERF1A-206ENST00000511162 UNC13BO14795 1591 aa32.98■■■□□ 2.87
SERF1A-206ENST00000511162 CAMSAP1Q5T5Y3 1602 aa32.98■■■□□ 2.87
SERF1A-206ENST00000511162 HFM1A2PYH4 1435 aa32.97■■■□□ 2.87
SERF1A-206ENST00000511162 LMTK2Q8IWU2 1503 aa32.97■■■□□ 2.87
SERF1A-206ENST00000511162 FBXO31Q5XUX0 539 aaPredicted RBP32.95■■■□□ 2.87
SERF1A-206ENST00000511162 GCC2Q8IWJ2 1684 aa32.94■■■□□ 2.86
SERF1A-206ENST00000511162 STRCQ7RTU9 1775 aa32.93■■■□□ 2.86
SERF1A-206ENST00000511162 ARHGAP31Q2M1Z3 1444 aa32.92■■■□□ 2.86
SERF1A-206ENST00000511162 TNRQ92752 1358 aa32.9■■■□□ 2.86
SERF1A-206ENST00000511162 MYO3AQ8NEV4 1616 aa32.88■■■□□ 2.85
SERF1A-206ENST00000511162 ERVK-7P63135 1459 aa32.88■■■□□ 2.85
SERF1A-206ENST00000511162 EFCAB6Q5THR3 1501 aa32.87■■■□□ 2.85
SERF1A-206ENST00000511162 SPATA31D1Q6ZQQ2 1576 aa32.87■■■□□ 2.85
SERF1A-206ENST00000511162 NUP155O75694 1391 aa32.83■■■□□ 2.85
SERF1A-206ENST00000511162 IQGAP3Q86VI3 1631 aa32.83■■■□□ 2.85
SERF1A-206ENST00000511162 CEP170BQ9Y4F5 1589 aaPredicted RBP32.81■■■□□ 2.84
SERF1A-206ENST00000511162 TET3O43151 1660 aa32.81■■■□□ 2.84
SERF1A-206ENST00000511162 ZNF142P52746 1687 aaPredicted RBP32.81■■■□□ 2.84
SERF1A-206ENST00000511162 FBXO41Q8TF61 875 aa32.79■■■□□ 2.84
SERF1A-206ENST00000511162 A2ML1A8K2U0 1454 aa32.78■■■□□ 2.84
SERF1A-206ENST00000511162 NLRP1Q9C000 1473 aa32.77■■■□□ 2.84
SERF1A-206ENST00000511162 RPRD2Q5VT52 1461 aaKnown RBP32.76■■■□□ 2.84
SERF1A-206ENST00000511162 DMRT2Q9Y5R5 561 aa32.72■■■□□ 2.83
SERF1A-206ENST00000511162 NOS1P29475 1434 aa32.71■■■□□ 2.83
SERF1A-206ENST00000511162 PTPRTO14522 1441 aa32.69■■■□□ 2.82
SERF1A-206ENST00000511162 SYNMO15061 1565 aa32.67■■■□□ 2.82
SERF1A-206ENST00000511162 E9PCH4 1651 aa32.67■■■□□ 2.82
SERF1A-206ENST00000511162 SETD5Q9C0A6 1442 aa32.67■■■□□ 2.82
SERF1A-206ENST00000511162 TRIM52Q96A61 297 aa32.66■■■□□ 2.82
SERF1A-206ENST00000511162 CFAP65Q6ZU64 1925 aaKnown RBP32.66■■■□□ 2.82
SERF1A-206ENST00000511162 UGGT1Q9NYU2 1555 aa32.65■■■□□ 2.82
SERF1A-206ENST00000511162 CERKQ8TCT0 537 aa32.63■■■□□ 2.81
SERF1A-206ENST00000511162 PLA2R1Q13018 1463 aa32.62■■■□□ 2.81
SERF1A-206ENST00000511162 RAB3GAP2Q9H2M9 1393 aa32.58■■■□□ 2.81
SERF1A-206ENST00000511162 IDI1Q13907 227 aa32.56■■■□□ 2.8
SERF1A-206ENST00000511162 THEMISQ8N1K5 641 aaPredicted RBP32.56■■■□□ 2.8
SERF1A-206ENST00000511162 PIK3C2BO00750 1634 aa32.55■■■□□ 2.8
SERF1A-206ENST00000511162 SLC52A1Q9NWF4 448 aa32.54■■■□□ 2.8
SERF1A-206ENST00000511162 SLC4A1APQ9BWU0 796 aaKnown RBP32.53■■■□□ 2.8
SERF1A-206ENST00000511162 UBR1Q8IWV7 1749 aa32.53■■■□□ 2.8
SERF1A-206ENST00000511162 PKD2Q13563 968 aa32.51■■■□□ 2.79
SERF1A-206ENST00000511162 LTBP4Q8N2S1 1624 aa32.51■■■□□ 2.79
SERF1A-206ENST00000511162 NCKAP5LQ9HCH0 1330 aa32.51■■■□□ 2.79
SERF1A-206ENST00000511162 ACIN1Q9UKV3 1341 aaKnown RBP32.51■■■□□ 2.79
SERF1A-206ENST00000511162 ADGRB3O60242 1522 aa32.49■■■□□ 2.79
SERF1A-206ENST00000511162 STAG3Q9UJ98 1225 aa32.47■■■□□ 2.79
SERF1A-206ENST00000511162 KDM5AP29375 1690 aaKnown RBP32.46■■■□□ 2.79
SERF1A-206ENST00000511162 SPHKAPQ2M3C7 1700 aa32.46■■■□□ 2.79
SERF1A-206ENST00000511162 ARHGAP23Q9P227 1491 aa32.43■■■□□ 2.78
SERF1A-206ENST00000511162 SLIT1O75093 1534 aa32.43■■■□□ 2.78
SERF1A-206ENST00000511162 TRPM2O94759 1503 aa32.43■■■□□ 2.78
SERF1A-206ENST00000511162 MPHOSPH9Q99550 1183 aa32.43■■■□□ 2.78
SERF1A-206ENST00000511162 ANKLE2Q86XL3 938 aa32.42■■■□□ 2.78
SERF1A-206ENST00000511162 NEURL4Q96JN8 1562 aa32.41■■■□□ 2.78
SERF1A-206ENST00000511162 POLR1AO95602 1720 aaPredicted RBP32.41■■■□□ 2.78
SERF1A-206ENST00000511162 TMEM2Q9UHN6 1383 aa32.4■■■□□ 2.78
SERF1A-206ENST00000511162 HRCP23327 699 aa32.38■■■□□ 2.77
SERF1A-206ENST00000511162 TMEM131LA2VDJ0 1609 aa32.37■■■□□ 2.77
SERF1A-206ENST00000511162 FOXD1Q16676 465 aa32.37■■■□□ 2.77
SERF1A-206ENST00000511162 SCAF11Q99590 1463 aaKnown RBP32.36■■■□□ 2.77
SERF1A-206ENST00000511162 MED14O60244 1454 aa32.35■■■□□ 2.77
SERF1A-206ENST00000511162 CLTCL1P53675 1640 aa32.34■■■□□ 2.77
SERF1A-206ENST00000511162 CHGAP10645 457 aaKnown RBP32.34■■■□□ 2.77
SERF1A-206ENST00000511162 IQSEC2Q5JU85 1478 aa32.34■■■□□ 2.77
SERF1A-206ENST00000511162 TRIM26Q12899 539 aaPredicted RBP32.33■■■□□ 2.77
SERF1A-206ENST00000511162 NPHP4O75161 1426 aaPredicted RBP32.33■■■□□ 2.77
SERF1A-206ENST00000511162 LTKP29376 864 aa32.32■■■□□ 2.76
SERF1A-206ENST00000511162 TXNDC2Q86VQ3 553 aa32.31■■■□□ 2.76
SERF1A-206ENST00000511162 ZNF335Q9H4Z2 1342 aaPredicted RBP32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms