RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 MTUS2Q5JR59 1369 aa13.73□□□□□ -0.21
PDPN-209ENST00000510906 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
PDPN-209ENST00000510906 PTPRMP28827 1452 aa13.73□□□□□ -0.21
PDPN-209ENST00000510906 BCORL1Q5H9F3 1711 aa13.73□□□□□ -0.21
PDPN-209ENST00000510906 TRAPPC8Q9Y2L5 1435 aa13.73□□□□□ -0.21
PDPN-209ENST00000510906 ZNF777Q9ULD5 760 aaPredicted RBP13.72□□□□□ -0.21
PDPN-209ENST00000510906 ABCC1P33527 1531 aa13.72□□□□□ -0.21
PDPN-209ENST00000510906 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
PDPN-209ENST00000510906 KDM5CP41229 1560 aa13.71□□□□□ -0.21
PDPN-209ENST00000510906 SIGLEC1Q9BZZ2 1709 aa13.71□□□□□ -0.21
PDPN-209ENST00000510906 MLECQ14165 292 aa13.71□□□□□ -0.21
PDPN-209ENST00000510906 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
PDPN-209ENST00000510906 ATP10AO60312 1499 aa13.71□□□□□ -0.21
PDPN-209ENST00000510906 MADDQ8WXG6 1647 aa13.71□□□□□ -0.22
PDPN-209ENST00000510906 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
PDPN-209ENST00000510906 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
PDPN-209ENST00000510906 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
PDPN-209ENST00000510906 RNF25Q96BH1 459 aaPredicted RBP13.69□□□□□ -0.22
PDPN-209ENST00000510906 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
PDPN-209ENST00000510906 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
PDPN-209ENST00000510906 EHBP1L1Q8N3D4 1523 aa13.68□□□□□ -0.22
PDPN-209ENST00000510906 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
PDPN-209ENST00000510906 SPATA31D1Q6ZQQ2 1576 aa13.67□□□□□ -0.22
PDPN-209ENST00000510906 SAMD9LQ8IVG5 1584 aa13.67□□□□□ -0.22
PDPN-209ENST00000510906 VPS8Q8N3P4 1428 aa13.67□□□□□ -0.22
PDPN-209ENST00000510906 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDPN-209ENST00000510906 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
PDPN-209ENST00000510906 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
PDPN-209ENST00000510906 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
PDPN-209ENST00000510906 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
PDPN-209ENST00000510906 RIMS1Q86UR5 1692 aaKnown RBP13.65□□□□□ -0.22
PDPN-209ENST00000510906 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
PDPN-209ENST00000510906 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
PDPN-209ENST00000510906 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
PDPN-209ENST00000510906 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
PDPN-209ENST00000510906 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
PDPN-209ENST00000510906 HS6ST3Q8IZP7 471 aa13.63□□□□□ -0.23
PDPN-209ENST00000510906 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
PDPN-209ENST00000510906 KIAA1107Q9UPP5 1409 aa13.63□□□□□ -0.23
PDPN-209ENST00000510906 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
PDPN-209ENST00000510906 SPAG9O60271 1321 aaKnown RBP13.62□□□□□ -0.23
PDPN-209ENST00000510906 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
PDPN-209ENST00000510906 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
PDPN-209ENST00000510906 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
PDPN-209ENST00000510906 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
PDPN-209ENST00000510906 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
PDPN-209ENST00000510906 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
PDPN-209ENST00000510906 CEBPAP49715 358 aaPredicted RBP13.58□□□□□ -0.24
PDPN-209ENST00000510906 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
PDPN-209ENST00000510906 MBD5Q9P267 1494 aa13.58□□□□□ -0.24
PDPN-209ENST00000510906 AGLP35573 1532 aa13.58□□□□□ -0.24
PDPN-209ENST00000510906 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
PDPN-209ENST00000510906 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
PDPN-209ENST00000510906 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
PDPN-209ENST00000510906 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
PDPN-209ENST00000510906 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
PDPN-209ENST00000510906 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
PDPN-209ENST00000510906 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
PDPN-209ENST00000510906 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
PDPN-209ENST00000510906 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
PDPN-209ENST00000510906 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
PDPN-209ENST00000510906 HSPA2P54652 639 aa13.54□□□□□ -0.24
PDPN-209ENST00000510906 CAMSAP2Q08AD1 1489 aa13.54□□□□□ -0.24
PDPN-209ENST00000510906 A2MP01023 1474 aa13.53□□□□□ -0.24
PDPN-209ENST00000510906 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
PDPN-209ENST00000510906 TAOK2Q9UL54 1235 aa13.52□□□□□ -0.25
PDPN-209ENST00000510906 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
PDPN-209ENST00000510906 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
PDPN-209ENST00000510906 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
PDPN-209ENST00000510906 RTEL1-TNFRSF6BF6WH68 1400 aa13.5□□□□□ -0.25
PDPN-209ENST00000510906 CNTLNQ9NXG0 1405 aa13.48□□□□□ -0.25
PDPN-209ENST00000510906 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
PDPN-209ENST00000510906 GGT6Q6P531 493 aa13.48□□□□□ -0.25
PDPN-209ENST00000510906 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
PDPN-209ENST00000510906 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.25
PDPN-209ENST00000510906 VGFO15240 615 aaPredicted RBP13.46□□□□□ -0.25
PDPN-209ENST00000510906 SGIP1Q9BQI5 828 aa13.46□□□□□ -0.25
PDPN-209ENST00000510906 MIA2Q96PC5 1412 aa13.46□□□□□ -0.26
PDPN-209ENST00000510906 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
PDPN-209ENST00000510906 C3P01024 1663 aa13.45□□□□□ -0.26
PDPN-209ENST00000510906 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
PDPN-209ENST00000510906 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
PDPN-209ENST00000510906 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
PDPN-209ENST00000510906 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
PDPN-209ENST00000510906 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
PDPN-209ENST00000510906 PREX1Q8TCU6 1659 aa13.44□□□□□ -0.26
PDPN-209ENST00000510906 KIF3BO15066 747 aa13.43□□□□□ -0.26
PDPN-209ENST00000510906 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
PDPN-209ENST00000510906 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
PDPN-209ENST00000510906 BCANQ96GW7 911 aa13.42□□□□□ -0.26
PDPN-209ENST00000510906 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
PDPN-209ENST00000510906 NPATQ14207 1427 aa13.4□□□□□ -0.26
PDPN-209ENST00000510906 MROH2AA6NES4 1674 aa13.4□□□□□ -0.26
PDPN-209ENST00000510906 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
PDPN-209ENST00000510906 PYGBP11216 843 aa13.39□□□□□ -0.27
PDPN-209ENST00000510906 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
PDPN-209ENST00000510906 MAST1Q9Y2H9 1570 aa13.39□□□□□ -0.27
PDPN-209ENST00000510906 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
PDPN-209ENST00000510906 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
PDPN-209ENST00000510906 STK25O00506 426 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms