RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 FER1L4A9Z1Z3 1794 aa29.34■■■□□ 2.29
CCND3-212ENST00000510058 PRDM15P57071 1507 aaPredicted RBP29.32■■■□□ 2.28
CCND3-212ENST00000510058 ZC3H13Q5T200 1668 aaKnown RBP29.31■■■□□ 2.28
CCND3-212ENST00000510058 MLECQ14165 292 aa29.3■■■□□ 2.28
CCND3-212ENST00000510058 MADDQ8WXG6 1647 aa29.3■■■□□ 2.28
CCND3-212ENST00000510058 GGT6Q6P531 493 aa29.29■■■□□ 2.28
CCND3-212ENST00000510058 MROH1Q8NDA8 1641 aa29.29■■■□□ 2.28
CCND3-212ENST00000510058 UNC13BO14795 1591 aa29.29■■■□□ 2.28
CCND3-212ENST00000510058 CNTLNQ9NXG0 1405 aa29.28■■■□□ 2.28
CCND3-212ENST00000510058 ACIN1Q9UKV3 1341 aaKnown RBP29.27■■■□□ 2.28
CCND3-212ENST00000510058 KDM5DQ9BY66 1539 aa29.27■■■□□ 2.28
CCND3-212ENST00000510058 MROH2AA6NES4 1674 aa29.26■■■□□ 2.27
CCND3-212ENST00000510058 ESF1Q9H501 851 aaKnown RBP29.26■■■□□ 2.27
CCND3-212ENST00000510058 KANK1Q14678 1352 aa29.25■■■□□ 2.27
CCND3-212ENST00000510058 RIMS1Q86UR5 1692 aaKnown RBP29.24■■■□□ 2.27
CCND3-212ENST00000510058 SETD5Q9C0A6 1442 aa29.23■■■□□ 2.27
CCND3-212ENST00000510058 CLTCQ00610 1675 aaKnown RBP29.22■■■□□ 2.27
CCND3-212ENST00000510058 VWDEQ8N2E2 1590 aa29.22■■■□□ 2.27
CCND3-212ENST00000510058 KDM4FA0A1W2PPD8 638 aa29.19■■■□□ 2.26
CCND3-212ENST00000510058 WASHC2CQ9Y4E1 1318 aa29.19■■■□□ 2.26
CCND3-212ENST00000510058 ABCC3O15438 1527 aa29.18■■■□□ 2.26
CCND3-212ENST00000510058 CEP152O94986 1710 aa29.17■■■□□ 2.26
CCND3-212ENST00000510058 LMTK2Q8IWU2 1503 aa29.17■■■□□ 2.26
CCND3-212ENST00000510058 IQGAP3Q86VI3 1631 aa29.16■■■□□ 2.26
CCND3-212ENST00000510058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.14■■■□□ 2.26
CCND3-212ENST00000510058 CAMSAP1Q5T5Y3 1602 aa29.13■■■□□ 2.25
CCND3-212ENST00000510058 PTPRMP28827 1452 aa29.13■■■□□ 2.25
CCND3-212ENST00000510058 C3P01024 1663 aa29.12■■■□□ 2.25
CCND3-212ENST00000510058 HRCP23327 699 aa29.11■■■□□ 2.25
CCND3-212ENST00000510058 TET3O43151 1660 aa29.11■■■□□ 2.25
CCND3-212ENST00000510058 RAB3GAP2Q9H2M9 1393 aa29.11■■■□□ 2.25
CCND3-212ENST00000510058 NUP155O75694 1391 aa29.1■■■□□ 2.25
CCND3-212ENST00000510058 ZMYM3Q14202 1370 aa29.09■■■□□ 2.25
CCND3-212ENST00000510058 ARHGAP31Q2M1Z3 1444 aa29.07■■■□□ 2.24
CCND3-212ENST00000510058 EFCAB6Q5THR3 1501 aa29.07■■■□□ 2.24
CCND3-212ENST00000510058 PZPP20742 1482 aa29.05■■■□□ 2.24
CCND3-212ENST00000510058 TRIM52Q96A61 297 aa29.03■■■□□ 2.24
CCND3-212ENST00000510058 RPRD2Q5VT52 1461 aaKnown RBP29.03■■■□□ 2.24
CCND3-212ENST00000510058 NPATQ14207 1427 aa29.01■■■□□ 2.23
CCND3-212ENST00000510058 E9PCH4 1651 aa28.96■■■□□ 2.23
CCND3-212ENST00000510058 PREX1Q8TCU6 1659 aa28.96■■■□□ 2.23
CCND3-212ENST00000510058 SPATA31D1Q6ZQQ2 1576 aa28.95■■■□□ 2.22
CCND3-212ENST00000510058 SETD1BQ9UPS6 1966 aaKnown RBP28.95■■■□□ 2.22
CCND3-212ENST00000510058 CEBPAP49715 358 aaPredicted RBP28.93■■■□□ 2.22
CCND3-212ENST00000510058 ERVK-7P63135 1459 aa28.91■■■□□ 2.22
CCND3-212ENST00000510058 SLC4A1APQ9BWU0 796 aaKnown RBP28.91■■■□□ 2.22
CCND3-212ENST00000510058 PCGF6Q9BYE7 350 aa28.91■■■□□ 2.22
CCND3-212ENST00000510058 CFAP65Q6ZU64 1925 aaKnown RBP28.88■■■□□ 2.21
CCND3-212ENST00000510058 PLPPR3Q6T4P5 718 aa28.87■■■□□ 2.21
CCND3-212ENST00000510058 MPHOSPH9Q99550 1183 aa28.87■■■□□ 2.21
CCND3-212ENST00000510058 TNRQ92752 1358 aa28.86■■■□□ 2.21
CCND3-212ENST00000510058 SPHKAPQ2M3C7 1700 aa28.86■■■□□ 2.21
CCND3-212ENST00000510058 NOS1P29475 1434 aa28.86■■■□□ 2.21
CCND3-212ENST00000510058 MYO3AQ8NEV4 1616 aa28.84■■■□□ 2.21
CCND3-212ENST00000510058 FBXO31Q5XUX0 539 aaPredicted RBP28.84■■■□□ 2.21
CCND3-212ENST00000510058 AEBP2Q6ZN18 517 aaPredicted RBP28.83■■■□□ 2.21
CCND3-212ENST00000510058 NLRP1Q9C000 1473 aa28.83■■■□□ 2.21
CCND3-212ENST00000510058 PKD2Q13563 968 aa28.82■■■□□ 2.2
CCND3-212ENST00000510058 ZNF142P52746 1687 aaPredicted RBP28.8■■■□□ 2.2
CCND3-212ENST00000510058 PTPRTO14522 1441 aa28.8■■■□□ 2.2
CCND3-212ENST00000510058 UHRF1BP1Q6BDS2 1440 aa28.8■■■□□ 2.2
CCND3-212ENST00000510058 SYNMO15061 1565 aa28.79■■■□□ 2.2
CCND3-212ENST00000510058 TRPM2O94759 1503 aa28.78■■■□□ 2.2
CCND3-212ENST00000510058 SLC52A1Q9NWF4 448 aa28.76■■■□□ 2.19
CCND3-212ENST00000510058 PIK3C2BO00750 1634 aa28.76■■■□□ 2.19
CCND3-212ENST00000510058 CEP170BQ9Y4F5 1589 aaPredicted RBP28.75■■■□□ 2.19
CCND3-212ENST00000510058 KDM5AP29375 1690 aaKnown RBP28.74■■■□□ 2.19
CCND3-212ENST00000510058 A2ML1A8K2U0 1454 aa28.73■■■□□ 2.19
CCND3-212ENST00000510058 LMTK3Q96Q04 1460 aa28.7■■■□□ 2.18
CCND3-212ENST00000510058 UGGT1Q9NYU2 1555 aa28.67■■■□□ 2.18
CCND3-212ENST00000510058 PLA2R1Q13018 1463 aa28.67■■■□□ 2.18
CCND3-212ENST00000510058 UBR1Q8IWV7 1749 aa28.66■■■□□ 2.18
CCND3-212ENST00000510058 CLTCL1P53675 1640 aa28.65■■■□□ 2.18
CCND3-212ENST00000510058 FOXD1Q16676 465 aa28.65■■■□□ 2.18
CCND3-212ENST00000510058 ADGRB3O60242 1522 aa28.64■■■□□ 2.18
CCND3-212ENST00000510058 CCDC144AA2RUR9 1427 aa28.64■■■□□ 2.18
CCND3-212ENST00000510058 IDI1Q13907 227 aa28.64■■■□□ 2.18
CCND3-212ENST00000510058 KIF1BO60333 1816 aa28.64■■■□□ 2.17
CCND3-212ENST00000510058 DHX57Q6P158 1386 aaKnown RBP28.63■■■□□ 2.17
CCND3-212ENST00000510058 ANKRD30BQ9BXX2 1392 aa28.61■■■□□ 2.17
CCND3-212ENST00000510058 TMEM131LA2VDJ0 1609 aa28.6■■■□□ 2.17
CCND3-212ENST00000510058 THEMISQ8N1K5 641 aaPredicted RBP28.59■■■□□ 2.17
CCND3-212ENST00000510058 STAG3Q9UJ98 1225 aa28.59■■■□□ 2.17
CCND3-212ENST00000510058 NEURL4Q96JN8 1562 aa28.58■■■□□ 2.17
CCND3-212ENST00000510058 MYO5BQ9ULV0 1848 aa28.55■■■□□ 2.16
CCND3-212ENST00000510058 SLIT1O75093 1534 aa28.52■■■□□ 2.16
CCND3-212ENST00000510058 ARHGAP23Q9P227 1491 aa28.5■■■□□ 2.15
CCND3-212ENST00000510058 CHGAP10645 457 aaKnown RBP28.48■■■□□ 2.15
CCND3-212ENST00000510058 POLR1AO95602 1720 aaPredicted RBP28.48■■■□□ 2.15
CCND3-212ENST00000510058 TMEM2Q9UHN6 1383 aa28.48■■■□□ 2.15
CCND3-212ENST00000510058 HDGFP51858 240 aaKnown RBP28.45■■■□□ 2.14
CCND3-212ENST00000510058 HSPA2P54652 639 aa28.45■■■□□ 2.14
CCND3-212ENST00000510058 CLSPNQ9HAW4 1339 aa28.44■■■□□ 2.14
CCND3-212ENST00000510058 SPATA31E1Q6ZUB1 1445 aa28.44■■■□□ 2.14
CCND3-212ENST00000510058 RPGRIP1LQ68CZ1 1315 aa28.42■■■□□ 2.14
CCND3-212ENST00000510058 ANKLE2Q86XL3 938 aa28.41■■■□□ 2.14
CCND3-212ENST00000510058 EID1Q9Y6B2 187 aa28.41■■■□□ 2.14
CCND3-212ENST00000510058 ZFYVE9O95405 1425 aa28.41■■■□□ 2.14
CCND3-212ENST00000510058 STRCQ7RTU9 1775 aa28.4■■■□□ 2.14
CCND3-212ENST00000510058 ZNF326Q5BKZ1 582 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms