RNA–Protein interactions for RNA: ENST00000509914.5

APBB3-214, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 2,020 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-214ENST00000509914 UNC13BO14795 1591 aa23.36■■□□□ 1.33
APBB3-214ENST00000509914 AGLP35573 1532 aa23.36■■□□□ 1.33
APBB3-214ENST00000509914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.35■■□□□ 1.33
APBB3-214ENST00000509914 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
APBB3-214ENST00000509914 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
APBB3-214ENST00000509914 NUP155O75694 1391 aa23.35■■□□□ 1.33
APBB3-214ENST00000509914 DEPDC5O75140 1603 aa23.34■■□□□ 1.33
APBB3-214ENST00000509914 MROH1Q8NDA8 1641 aa23.34■■□□□ 1.33
APBB3-214ENST00000509914 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
APBB3-214ENST00000509914 RNF17Q9BXT8 1623 aaKnown RBP23.32■■□□□ 1.32
APBB3-214ENST00000509914 PZPP20742 1482 aa23.32■■□□□ 1.32
APBB3-214ENST00000509914 KDM5DQ9BY66 1539 aa23.32■■□□□ 1.32
APBB3-214ENST00000509914 GGT6Q6P531 493 aa23.32■■□□□ 1.32
APBB3-214ENST00000509914 CCER1Q8TC90 406 aaPredicted RBP23.32■■□□□ 1.32
APBB3-214ENST00000509914 PRDM15P57071 1507 aaPredicted RBP23.3■■□□□ 1.32
APBB3-214ENST00000509914 MPHOSPH9Q99550 1183 aa23.3■■□□□ 1.32
APBB3-214ENST00000509914 VWDEQ8N2E2 1590 aa23.28■■□□□ 1.32
APBB3-214ENST00000509914 FAM135AQ9P2D6 1515 aa23.27■■□□□ 1.32
APBB3-214ENST00000509914 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.31
APBB3-214ENST00000509914 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
APBB3-214ENST00000509914 IQGAP3Q86VI3 1631 aa23.26■■□□□ 1.31
APBB3-214ENST00000509914 KANK1Q14678 1352 aa23.24■■□□□ 1.31
APBB3-214ENST00000509914 MLECQ14165 292 aa23.24■■□□□ 1.31
APBB3-214ENST00000509914 PKD2Q13563 968 aa23.2■■□□□ 1.3
APBB3-214ENST00000509914 FOXD1Q16676 465 aa23.2■■□□□ 1.3
APBB3-214ENST00000509914 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.3
APBB3-214ENST00000509914 ABCC3O15438 1527 aa23.19■■□□□ 1.3
APBB3-214ENST00000509914 LMTK2Q8IWU2 1503 aa23.19■■□□□ 1.3
APBB3-214ENST00000509914 PPP6R1Q9UPN7 881 aa23.18■■□□□ 1.3
APBB3-214ENST00000509914 MYT1Q01538 1121 aa23.16■■□□□ 1.3
APBB3-214ENST00000509914 CEP152O94986 1710 aa23.15■■□□□ 1.3
APBB3-214ENST00000509914 TET3O43151 1660 aa23.14■■□□□ 1.3
APBB3-214ENST00000509914 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
APBB3-214ENST00000509914 ZC3H13Q5T200 1668 aaKnown RBP23.12■■□□□ 1.29
APBB3-214ENST00000509914 E9PCH4 1651 aa23.1■■□□□ 1.29
APBB3-214ENST00000509914 ANKRD30BQ9BXX2 1392 aa23.1■■□□□ 1.29
APBB3-214ENST00000509914 CAMSAP1Q5T5Y3 1602 aa23.1■■□□□ 1.29
APBB3-214ENST00000509914 NPATQ14207 1427 aa23.09■■□□□ 1.29
APBB3-214ENST00000509914 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
APBB3-214ENST00000509914 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
APBB3-214ENST00000509914 ARHGAP31Q2M1Z3 1444 aa23.07■■□□□ 1.28
APBB3-214ENST00000509914 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
APBB3-214ENST00000509914 ESF1Q9H501 851 aaKnown RBP23.06■■□□□ 1.28
APBB3-214ENST00000509914 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
APBB3-214ENST00000509914 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
APBB3-214ENST00000509914 ZMYM3Q14202 1370 aa23.04■■□□□ 1.28
APBB3-214ENST00000509914 CNTLNQ9NXG0 1405 aa23.04■■□□□ 1.28
APBB3-214ENST00000509914 PTPRTO14522 1441 aa23.03■■□□□ 1.28
APBB3-214ENST00000509914 ADAMTSL3P82987 1691 aa23.02■■□□□ 1.28
APBB3-214ENST00000509914 FER1L4A9Z1Z3 1794 aa23■■□□□ 1.27
APBB3-214ENST00000509914 MADDQ8WXG6 1647 aa23■■□□□ 1.27
APBB3-214ENST00000509914 FBXO31Q5XUX0 539 aaPredicted RBP23■■□□□ 1.27
APBB3-214ENST00000509914 NOS1P29475 1434 aa22.98■■□□□ 1.27
APBB3-214ENST00000509914 MROH2AA6NES4 1674 aa22.98■■□□□ 1.27
APBB3-214ENST00000509914 TRPM2O94759 1503 aa22.97■■□□□ 1.27
APBB3-214ENST00000509914 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
APBB3-214ENST00000509914 SPHKAPQ2M3C7 1700 aa22.96■■□□□ 1.27
APBB3-214ENST00000509914 CEBPAP49715 358 aaPredicted RBP22.96■■□□□ 1.27
APBB3-214ENST00000509914 ERVK-7P63135 1459 aa22.95■■□□□ 1.26
APBB3-214ENST00000509914 CCDC144AA2RUR9 1427 aa22.93■■□□□ 1.26
APBB3-214ENST00000509914 PREX1Q8TCU6 1659 aa22.93■■□□□ 1.26
APBB3-214ENST00000509914 RIMS1Q86UR5 1692 aaKnown RBP22.93■■□□□ 1.26
APBB3-214ENST00000509914 SYNMO15061 1565 aa22.93■■□□□ 1.26
APBB3-214ENST00000509914 SPATA31D1Q6ZQQ2 1576 aa22.92■■□□□ 1.26
APBB3-214ENST00000509914 UGGT1Q9NYU2 1555 aa22.92■■□□□ 1.26
APBB3-214ENST00000509914 C3P01024 1663 aa22.91■■□□□ 1.26
APBB3-214ENST00000509914 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
APBB3-214ENST00000509914 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
APBB3-214ENST00000509914 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
APBB3-214ENST00000509914 KDM4FA0A1W2PPD8 638 aa22.87■■□□□ 1.25
APBB3-214ENST00000509914 IDI1Q13907 227 aa22.86■■□□□ 1.25
APBB3-214ENST00000509914 PIK3C2BO00750 1634 aa22.85■■□□□ 1.25
APBB3-214ENST00000509914 SLC52A1Q9NWF4 448 aa22.85■■□□□ 1.25
APBB3-214ENST00000509914 PTPRMP28827 1452 aa22.85■■□□□ 1.25
APBB3-214ENST00000509914 TNRQ92752 1358 aa22.85■■□□□ 1.25
APBB3-214ENST00000509914 SPATA31E1Q6ZUB1 1445 aa22.83■■□□□ 1.24
APBB3-214ENST00000509914 TONSLQ96HA7 1378 aa22.8■■□□□ 1.24
APBB3-214ENST00000509914 CENPBP07199 599 aaPredicted RBP22.8■■□□□ 1.24
APBB3-214ENST00000509914 L3MBTL2Q969R5 705 aa22.79■■□□□ 1.24
APBB3-214ENST00000509914 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
APBB3-214ENST00000509914 RGL3Q3MIN7 710 aa22.79■■□□□ 1.24
APBB3-214ENST00000509914 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
APBB3-214ENST00000509914 CHGAP10645 457 aaKnown RBP22.76■■□□□ 1.23
APBB3-214ENST00000509914 NEURL4Q96JN8 1562 aa22.75■■□□□ 1.23
APBB3-214ENST00000509914 NLRP1Q9C000 1473 aa22.74■■□□□ 1.23
APBB3-214ENST00000509914 TMEM131LA2VDJ0 1609 aa22.73■■□□□ 1.23
APBB3-214ENST00000509914 KIF1BO60333 1816 aa22.73■■□□□ 1.23
APBB3-214ENST00000509914 A2ML1A8K2U0 1454 aa22.7■■□□□ 1.22
APBB3-214ENST00000509914 MYO3AQ8NEV4 1616 aa22.7■■□□□ 1.22
APBB3-214ENST00000509914 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
APBB3-214ENST00000509914 DCAF11Q8TEB1 546 aa22.7■■□□□ 1.22
APBB3-214ENST00000509914 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
APBB3-214ENST00000509914 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
APBB3-214ENST00000509914 ZNF326Q5BKZ1 582 aaKnown RBP22.69■■□□□ 1.22
APBB3-214ENST00000509914 KDM2AQ9Y2K7 1162 aa22.67■■□□□ 1.22
APBB3-214ENST00000509914 GTF3C3Q9Y5Q9 886 aa22.67■■□□□ 1.22
APBB3-214ENST00000509914 DIEXFQ68CQ4 756 aaKnown RBP22.67■■□□□ 1.22
APBB3-214ENST00000509914 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
APBB3-214ENST00000509914 MYO5BQ9ULV0 1848 aa22.64■■□□□ 1.22
APBB3-214ENST00000509914 RPGRIP1LQ68CZ1 1315 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms