RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
MBD4-208ENST00000509828 PLXNC1O60486 1568 aa16.59■□□□□ 0.25
MBD4-208ENST00000509828 ZNF142P52746 1687 aaPredicted RBP16.58■□□□□ 0.24
MBD4-208ENST00000509828 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
MBD4-208ENST00000509828 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
MBD4-208ENST00000509828 RTEL1-TNFRSF6BF6WH68 1400 aa16.56■□□□□ 0.24
MBD4-208ENST00000509828 TSPY4P0CV99 314 aa16.56■□□□□ 0.24
MBD4-208ENST00000509828 TSPY10P0CW01 314 aa16.56■□□□□ 0.24
MBD4-208ENST00000509828 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
MBD4-208ENST00000509828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.24
MBD4-208ENST00000509828 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
MBD4-208ENST00000509828 DNMT1P26358 1616 aaKnown RBP16.53■□□□□ 0.24
MBD4-208ENST00000509828 CPS1P31327 1500 aa16.53■□□□□ 0.24
MBD4-208ENST00000509828 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
MBD4-208ENST00000509828 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
MBD4-208ENST00000509828 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
MBD4-208ENST00000509828 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
MBD4-208ENST00000509828 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
MBD4-208ENST00000509828 PZPP20742 1482 aa16.49■□□□□ 0.23
MBD4-208ENST00000509828 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
MBD4-208ENST00000509828 KDM5DQ9BY66 1539 aa16.49■□□□□ 0.23
MBD4-208ENST00000509828 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
MBD4-208ENST00000509828 NPHP4O75161 1426 aaPredicted RBP16.48■□□□□ 0.23
MBD4-208ENST00000509828 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
MBD4-208ENST00000509828 MED1Q15648 1581 aaPredicted RBP16.46■□□□□ 0.23
MBD4-208ENST00000509828 UGGT1Q9NYU2 1555 aa16.46■□□□□ 0.23
MBD4-208ENST00000509828 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
MBD4-208ENST00000509828 POLR1AO95602 1720 aaPredicted RBP16.44■□□□□ 0.22
MBD4-208ENST00000509828 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
MBD4-208ENST00000509828 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
MBD4-208ENST00000509828 VWDEQ8N2E2 1590 aa16.39■□□□□ 0.21
MBD4-208ENST00000509828 TXNDC2Q86VQ3 553 aa16.39■□□□□ 0.21
MBD4-208ENST00000509828 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
MBD4-208ENST00000509828 EID1Q9Y6B2 187 aa16.39■□□□□ 0.21
MBD4-208ENST00000509828 MED14O60244 1454 aa16.39■□□□□ 0.21
MBD4-208ENST00000509828 DEPDC5O75140 1603 aa16.36■□□□□ 0.21
MBD4-208ENST00000509828 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
MBD4-208ENST00000509828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.211e-9■■■□□ 16.7
MBD4-208ENST00000509828 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
MBD4-208ENST00000509828 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
MBD4-208ENST00000509828 ABCC3O15438 1527 aa16.32■□□□□ 0.2
MBD4-208ENST00000509828 ERVK-7P63135 1459 aa16.32■□□□□ 0.2
MBD4-208ENST00000509828 LTKP29376 864 aa16.31■□□□□ 0.2
MBD4-208ENST00000509828 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
MBD4-208ENST00000509828 BCANQ96GW7 911 aa16.3■□□□□ 0.2
MBD4-208ENST00000509828 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
MBD4-208ENST00000509828 RNF17Q9BXT8 1623 aaKnown RBP16.28■□□□□ 0.2
MBD4-208ENST00000509828 APLP2Q06481 763 aa16.28■□□□□ 0.2
MBD4-208ENST00000509828 KANK1Q14678 1352 aa16.27■□□□□ 0.2
MBD4-208ENST00000509828 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
MBD4-208ENST00000509828 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.19
MBD4-208ENST00000509828 ZC3H13Q5T200 1668 aaKnown RBP16.27■□□□□ 0.19
MBD4-208ENST00000509828 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.19
MBD4-208ENST00000509828 ALKQ9UM73 1620 aa16.27■□□□□ 0.19
MBD4-208ENST00000509828 SYNMO15061 1565 aa16.26■□□□□ 0.19
MBD4-208ENST00000509828 KANK4Q5T7N3 995 aaPredicted RBP16.26■□□□□ 0.19
MBD4-208ENST00000509828 KIF15Q9NS87 1388 aa16.25■□□□□ 0.19
MBD4-208ENST00000509828 MAST1Q9Y2H9 1570 aa16.24■□□□□ 0.19
MBD4-208ENST00000509828 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
MBD4-208ENST00000509828 CFAP65Q6ZU64 1925 aaKnown RBP16.23■□□□□ 0.19
MBD4-208ENST00000509828 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
MBD4-208ENST00000509828 EIF2AK4Q9P2K8 1649 aaKnown RBP16.23■□□□□ 0.19
MBD4-208ENST00000509828 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
MBD4-208ENST00000509828 SLC26A8Q96RN1 970 aa16.23■□□□□ 0.19
MBD4-208ENST00000509828 RGS17Q9UGC6 210 aaPredicted RBP16.23■□□□□ 0.19
MBD4-208ENST00000509828 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
MBD4-208ENST00000509828 KCNA6P17658 529 aa16.22■□□□□ 0.19
MBD4-208ENST00000509828 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
MBD4-208ENST00000509828 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
MBD4-208ENST00000509828 CHIC2Q9UKJ5 165 aa16.21■□□□□ 0.19
MBD4-208ENST00000509828 CEP152O94986 1710 aa16.21■□□□□ 0.19
MBD4-208ENST00000509828 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.19
MBD4-208ENST00000509828 TMEM94Q12767 1356 aa16.21■□□□□ 0.19
MBD4-208ENST00000509828 SLIT1O75093 1534 aa16.2■□□□□ 0.18
MBD4-208ENST00000509828 IDI1Q13907 227 aa16.2■□□□□ 0.18
MBD4-208ENST00000509828 ARHGAP23Q9P227 1491 aa16.2■□□□□ 0.18
MBD4-208ENST00000509828 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
MBD4-208ENST00000509828 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
MBD4-208ENST00000509828 POTEAQ6S8J7 498 aa16.18■□□□□ 0.18
MBD4-208ENST00000509828 MROH1Q8NDA8 1641 aa16.18■□□□□ 0.18
MBD4-208ENST00000509828 ERBINQ96RT1 1412 aa16.18■□□□□ 0.18
MBD4-208ENST00000509828 PPP1R15AO75807 674 aaPredicted RBP16.17■□□□□ 0.18
MBD4-208ENST00000509828 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
MBD4-208ENST00000509828 C14orf37Q86TY3 774 aa16.16■□□□□ 0.18
MBD4-208ENST00000509828 ANKRD30AQ9BXX3 1397 aa16.15■□□□□ 0.18
MBD4-208ENST00000509828 ABCC5O15440 1437 aa16.15■□□□□ 0.18
MBD4-208ENST00000509828 MSH6P52701 1360 aa16.14■□□□□ 0.17
MBD4-208ENST00000509828 SLAIN2Q9P270 581 aa16.14■□□□□ 0.17
MBD4-208ENST00000509828 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.17
MBD4-208ENST00000509828 PIK3C2BO00750 1634 aa16.13■□□□□ 0.17
MBD4-208ENST00000509828 SLC52A1Q9NWF4 448 aa16.13■□□□□ 0.17
MBD4-208ENST00000509828 PRDM15P57071 1507 aaPredicted RBP16.13■□□□□ 0.17
MBD4-208ENST00000509828 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
MBD4-208ENST00000509828 MAP3K1Q13233 1512 aa16.12■□□□□ 0.17
MBD4-208ENST00000509828 CHGAP10645 457 aaKnown RBP16.11■□□□□ 0.17
MBD4-208ENST00000509828 DAPK1P53355 1430 aa16.11■□□□□ 0.17
MBD4-208ENST00000509828 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.16
MBD4-208ENST00000509828 JCADQ9P266 1359 aa16.08■□□□□ 0.16
MBD4-208ENST00000509828 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.16
MBD4-208ENST00000509828 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms