RNA–Protein interactions for RNA: ENST00000509652.1

SNCAIP-213, Transcript of synuclein alpha interacting protein, humanhuman

TSL 4

Gene SNCAIP, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-213ENST00000509652 SHANK2Q9UPX8 1470 aa12.3□□□□□ -0.44
SNCAIP-213ENST00000509652 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
SNCAIP-213ENST00000509652 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
SNCAIP-213ENST00000509652 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
SNCAIP-213ENST00000509652 ANKLE2Q86XL3 938 aa12.27□□□□□ -0.45
SNCAIP-213ENST00000509652 CCNB3Q8WWL7 1395 aa12.27□□□□□ -0.45
SNCAIP-213ENST00000509652 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
SNCAIP-213ENST00000509652 THEMISQ8N1K5 641 aaPredicted RBP12.26□□□□□ -0.45
SNCAIP-213ENST00000509652 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
SNCAIP-213ENST00000509652 TNRQ92752 1358 aa12.25□□□□□ -0.45
SNCAIP-213ENST00000509652 DEPDC5O75140 1603 aa12.25□□□□□ -0.45
SNCAIP-213ENST00000509652 IQGAP1P46940 1657 aa12.24□□□□□ -0.45
SNCAIP-213ENST00000509652 TIAM1Q13009 1591 aa12.23□□□□□ -0.45
SNCAIP-213ENST00000509652 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
SNCAIP-213ENST00000509652 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
SNCAIP-213ENST00000509652 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
SNCAIP-213ENST00000509652 SYNMO15061 1565 aa12.22□□□□□ -0.45
SNCAIP-213ENST00000509652 VWDEQ8N2E2 1590 aa12.22□□□□□ -0.45
SNCAIP-213ENST00000509652 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
SNCAIP-213ENST00000509652 PZPP20742 1482 aa12.22□□□□□ -0.45
SNCAIP-213ENST00000509652 NLRP1Q9C000 1473 aa12.22□□□□□ -0.45
SNCAIP-213ENST00000509652 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
SNCAIP-213ENST00000509652 MTUS2Q5JR59 1369 aa12.21□□□□□ -0.45
SNCAIP-213ENST00000509652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNCAIP-213ENST00000509652 WASHC2CQ9Y4E1 1318 aa12.21□□□□□ -0.45
SNCAIP-213ENST00000509652 MED14O60244 1454 aa12.21□□□□□ -0.46
SNCAIP-213ENST00000509652 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
SNCAIP-213ENST00000509652 KIF3BO15066 747 aa12.2□□□□□ -0.46
SNCAIP-213ENST00000509652 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
SNCAIP-213ENST00000509652 EHBP1L1Q8N3D4 1523 aa12.19□□□□□ -0.46
SNCAIP-213ENST00000509652 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
SNCAIP-213ENST00000509652 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
SNCAIP-213ENST00000509652 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
SNCAIP-213ENST00000509652 ALKQ9UM73 1620 aa12.17□□□□□ -0.46
SNCAIP-213ENST00000509652 STRCP1A6NGW2 1772 aa12.17□□□□□ -0.46
SNCAIP-213ENST00000509652 ZC3H13Q5T200 1668 aaKnown RBP12.16□□□□□ -0.46
SNCAIP-213ENST00000509652 LRRC9Q6ZRR7 1453 aa12.16□□□□□ -0.46
SNCAIP-213ENST00000509652 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
SNCAIP-213ENST00000509652 MBD5Q9P267 1494 aa12.15□□□□□ -0.46
SNCAIP-213ENST00000509652 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
SNCAIP-213ENST00000509652 ZNF644Q9H582 1327 aaPredicted RBP12.13□□□□□ -0.47
SNCAIP-213ENST00000509652 CFAP65Q6ZU64 1925 aaKnown RBP12.13□□□□□ -0.47
SNCAIP-213ENST00000509652 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
SNCAIP-213ENST00000509652 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
SNCAIP-213ENST00000509652 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
SNCAIP-213ENST00000509652 UBR1Q8IWV7 1749 aa12.11□□□□□ -0.47
SNCAIP-213ENST00000509652 EIF2AK4Q9P2K8 1649 aaKnown RBP12.09□□□□□ -0.47
SNCAIP-213ENST00000509652 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.47
SNCAIP-213ENST00000509652 ARHGEF5Q12774 1597 aa12.08□□□□□ -0.48
SNCAIP-213ENST00000509652 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.48
SNCAIP-213ENST00000509652 CEP152O94986 1710 aa12.07□□□□□ -0.48
SNCAIP-213ENST00000509652 RGS17Q9UGC6 210 aaPredicted RBP12.07□□□□□ -0.48
SNCAIP-213ENST00000509652 EID1Q9Y6B2 187 aa12.07□□□□□ -0.48
SNCAIP-213ENST00000509652 ABCC3O15438 1527 aa12.06□□□□□ -0.48
SNCAIP-213ENST00000509652 FAM135BQ49AJ0 1406 aa12.06□□□□□ -0.48
SNCAIP-213ENST00000509652 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
SNCAIP-213ENST00000509652 ERVK-7P63135 1459 aa12.06□□□□□ -0.48
SNCAIP-213ENST00000509652 NCOA2Q15596 1464 aa12.06□□□□□ -0.48
SNCAIP-213ENST00000509652 TXNDC2Q86VQ3 553 aa12.05□□□□□ -0.48
SNCAIP-213ENST00000509652 ROBO1Q9Y6N7 1651 aa12.04□□□□□ -0.48
SNCAIP-213ENST00000509652 SLIT1O75093 1534 aa12.04□□□□□ -0.48
SNCAIP-213ENST00000509652 MAST1Q9Y2H9 1570 aa12.03□□□□□ -0.48
SNCAIP-213ENST00000509652 POTEAQ6S8J7 498 aa12.02□□□□□ -0.49
SNCAIP-213ENST00000509652 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
SNCAIP-213ENST00000509652 MYOM3Q5VTT5 1437 aa12.02□□□□□ -0.49
SNCAIP-213ENST00000509652 ARHGAP23Q9P227 1491 aa12.02□□□□□ -0.49
SNCAIP-213ENST00000509652 KDM5AP29375 1690 aaKnown RBP12.01□□□□□ -0.49
SNCAIP-213ENST00000509652 SETD1AO15047 1707 aaKnown RBP12.01□□□□□ -0.49
SNCAIP-213ENST00000509652 PHLPP1O60346 1717 aa12.01□□□□□ -0.49
SNCAIP-213ENST00000509652 LTKP29376 864 aa11.99□□□□□ -0.49
SNCAIP-213ENST00000509652 PIK3C2BO00750 1634 aa11.99□□□□□ -0.49
SNCAIP-213ENST00000509652 MROH1Q8NDA8 1641 aa11.98□□□□□ -0.49
SNCAIP-213ENST00000509652 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
SNCAIP-213ENST00000509652 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
SNCAIP-213ENST00000509652 DUOX2Q9NRD8 1548 aa11.97□□□□□ -0.49
SNCAIP-213ENST00000509652 KCNA6P17658 529 aa11.97□□□□□ -0.49
SNCAIP-213ENST00000509652 PPARGC1BQ86YN6 1023 aaKnown RBP11.97□□□□□ -0.49
SNCAIP-213ENST00000509652 ARHGAP31Q2M1Z3 1444 aa11.96□□□□□ -0.49
SNCAIP-213ENST00000509652 FGD6Q6ZV73 1430 aa11.96□□□□□ -0.49
SNCAIP-213ENST00000509652 MSH6P52701 1360 aa11.96□□□□□ -0.49
SNCAIP-213ENST00000509652 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.49
SNCAIP-213ENST00000509652 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.5
SNCAIP-213ENST00000509652 KANK1Q14678 1352 aa11.95□□□□□ -0.5
SNCAIP-213ENST00000509652 JCADQ9P266 1359 aa11.95□□□□□ -0.5
SNCAIP-213ENST00000509652 PTPN23Q9H3S7 1636 aa11.95□□□□□ -0.5
SNCAIP-213ENST00000509652 PRDM15P57071 1507 aaPredicted RBP11.95□□□□□ -0.5
SNCAIP-213ENST00000509652 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
SNCAIP-213ENST00000509652 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
SNCAIP-213ENST00000509652 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
SNCAIP-213ENST00000509652 ZNF772Q68DY9 489 aaPredicted RBP11.93□□□□□ -0.5
SNCAIP-213ENST00000509652 BCANQ96GW7 911 aa11.93□□□□□ -0.5
SNCAIP-213ENST00000509652 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
SNCAIP-213ENST00000509652 ERBINQ96RT1 1412 aa11.92□□□□□ -0.5
SNCAIP-213ENST00000509652 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
SNCAIP-213ENST00000509652 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
SNCAIP-213ENST00000509652 CROCC2H7BZ55 1655 aa11.91□□□□□ -0.5
SNCAIP-213ENST00000509652 TET3O43151 1660 aa11.91□□□□□ -0.5
SNCAIP-213ENST00000509652 CHD2O14647 1828 aaKnown RBP11.91□□□□□ -0.5
SNCAIP-213ENST00000509652 SLC26A8Q96RN1 970 aa11.91□□□□□ -0.5
SNCAIP-213ENST00000509652 HDGFP51858 240 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms