RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 HNRNPMP52272 730 aaKnown RBP eCLIP8.31□□□□□ -1.08
HTT-206ENST00000509618 UPF1Q92900 1129 aaKnown RBP eCLIP8.31□□□□□ -1.08
HTT-206ENST00000509618 SYNMO15061 1565 aa8.31□□□□□ -1.08
HTT-206ENST00000509618 IQGAP1P46940 1657 aa8.3□□□□□ -1.08
HTT-206ENST00000509618 SPAG9O60271 1321 aaKnown RBP8.3□□□□□ -1.08
HTT-206ENST00000509618 CLIP1P30622 1438 aa8.29□□□□□ -1.08
HTT-206ENST00000509618 LRP6O75581 1613 aa8.29□□□□□ -1.08
HTT-206ENST00000509618 ZNF777Q9ULD5 760 aaPredicted RBP8.29□□□□□ -1.08
HTT-206ENST00000509618 ZC3H13Q5T200 1668 aaKnown RBP8.29□□□□□ -1.08
HTT-206ENST00000509618 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
HTT-206ENST00000509618 GPATCH8Q9UKJ3 1502 aaKnown RBP8.29□□□□□ -1.08
HTT-206ENST00000509618 PZPP20742 1482 aa8.28□□□□□ -1.08
HTT-206ENST00000509618 UGGT1Q9NYU2 1555 aa8.27□□□□□ -1.09
HTT-206ENST00000509618 RBM33Q96EV2 1170 aaKnown RBP8.27□□□□□ -1.09
HTT-206ENST00000509618 FMN1Q68DA7 1419 aa8.27□□□□□ -1.09
HTT-206ENST00000509618 MAP3K1Q13233 1512 aa8.26□□□□□ -1.09
HTT-206ENST00000509618 ANKLE2Q86XL3 938 aa8.26□□□□□ -1.09
HTT-206ENST00000509618 ZNF644Q9H582 1327 aaPredicted RBP8.26□□□□□ -1.09
HTT-206ENST00000509618 ROBO1Q9Y6N7 1651 aa8.25□□□□□ -1.09
HTT-206ENST00000509618 TRIM52Q96A61 297 aa8.25□□□□□ -1.09
HTT-206ENST00000509618 MIA2Q96PC5 1412 aa8.25□□□□□ -1.09
HTT-206ENST00000509618 ADGBQ8N7X0 1667 aa8.24□□□□□ -1.09
HTT-206ENST00000509618 KDM5DQ9BY66 1539 aa8.24□□□□□ -1.09
HTT-206ENST00000509618 FAM135BQ49AJ0 1406 aa8.24□□□□□ -1.09
HTT-206ENST00000509618 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
HTT-206ENST00000509618 NCOA2Q15596 1464 aa8.24□□□□□ -1.09
HTT-206ENST00000509618 LTKP29376 864 aa8.23□□□□□ -1.09
HTT-206ENST00000509618 NLRP1Q9C000 1473 aa8.23□□□□□ -1.09
HTT-206ENST00000509618 MBD5Q9P267 1494 aa8.23□□□□□ -1.09
HTT-206ENST00000509618 FAM135AQ9P2D6 1515 aa8.23□□□□□ -1.09
HTT-206ENST00000509618 TMEM94Q12767 1356 aa8.22□□□□□ -1.09
HTT-206ENST00000509618 KIAA1107Q9UPP5 1409 aa8.21□□□□□ -1.09
HTT-206ENST00000509618 CASKIN1Q8WXD9 1431 aa8.2□□□□□ -1.1
HTT-206ENST00000509618 ERVK-7P63135 1459 aa8.2□□□□□ -1.1
HTT-206ENST00000509618 SCAF11Q99590 1463 aaKnown RBP8.2□□□□□ -1.1
HTT-206ENST00000509618 SETBP1Q9Y6X0 1596 aa8.2□□□□□ -1.1
HTT-206ENST00000509618 THEMISQ8N1K5 641 aaPredicted RBP8.2□□□□□ -1.1
HTT-206ENST00000509618 COL16A1Q07092 1604 aaPredicted RBP8.2□□□□□ -1.1
HTT-206ENST00000509618 DHX29Q7Z478 1369 aaKnown RBP8.2□□□□□ -1.1
HTT-206ENST00000509618 ABCC3O15438 1527 aa8.19□□□□□ -1.1
HTT-206ENST00000509618 KIF3BO15066 747 aa8.19□□□□□ -1.1
HTT-206ENST00000509618 UBR1Q8IWV7 1749 aa8.19□□□□□ -1.1
HTT-206ENST00000509618 ARHGAP23Q9P227 1491 aa8.19□□□□□ -1.1
HTT-206ENST00000509618 TIAM1Q13009 1591 aa8.18□□□□□ -1.1
HTT-206ENST00000509618 RGS12O14924 1447 aa8.18□□□□□ -1.1
HTT-206ENST00000509618 EEA1Q15075 1411 aa8.18□□□□□ -1.1
HTT-206ENST00000509618 CCDC18Q5T9S5 1454 aa8.18□□□□□ -1.1
HTT-206ENST00000509618 MROH1Q8NDA8 1641 aa8.18□□□□□ -1.1
HTT-206ENST00000509618 PHLPP1O60346 1717 aa8.17□□□□□ -1.1
HTT-206ENST00000509618 SLIT1O75093 1534 aa8.16□□□□□ -1.1
HTT-206ENST00000509618 PLEKHH2Q8IVE3 1493 aa8.16□□□□□ -1.1
HTT-206ENST00000509618 JCADQ9P266 1359 aa8.16□□□□□ -1.1
HTT-206ENST00000509618 CFDP1Q9UEE9 299 aaPredicted RBP8.16□□□□□ -1.1
HTT-206ENST00000509618 WASHC2CQ9Y4E1 1318 aa8.16□□□□□ -1.1
HTT-206ENST00000509618 UBTFP17480 764 aaKnown RBP8.15□□□□□ -1.1
HTT-206ENST00000509618 RTEL1-TNFRSF6BF6WH68 1400 aa8.14□□□□□ -1.11
HTT-206ENST00000509618 CCNB3Q8WWL7 1395 aa8.14□□□□□ -1.11
HTT-206ENST00000509618 MAST1Q9Y2H9 1570 aa8.14□□□□□ -1.11
HTT-206ENST00000509618 PRDM15P57071 1507 aaPredicted RBP8.13□□□□□ -1.11
HTT-206ENST00000509618 FYCO1Q9BQS8 1478 aa8.13□□□□□ -1.11
HTT-206ENST00000509618 TXNDC2Q86VQ3 553 aa8.13□□□□□ -1.11
HTT-206ENST00000509618 DIP2AQ14689 1571 aa8.13□□□□□ -1.11
HTT-206ENST00000509618 NWD1Q149M9 1564 aa8.13□□□□□ -1.11
HTT-206ENST00000509618 CEP152O94986 1710 aa8.12□□□□□ -1.11
HTT-206ENST00000509618 SLC26A8Q96RN1 970 aa8.12□□□□□ -1.11
HTT-206ENST00000509618 CCDC141Q6ZP82 1450 aa8.12□□□□□ -1.11
HTT-206ENST00000509618 LRRC9Q6ZRR7 1453 aa8.12□□□□□ -1.11
HTT-206ENST00000509618 TET3O43151 1660 aa8.11□□□□□ -1.11
HTT-206ENST00000509618 PIK3C2BO00750 1634 aa8.11□□□□□ -1.11
HTT-206ENST00000509618 CAMSAP2Q08AD1 1489 aa8.11□□□□□ -1.11
HTT-206ENST00000509618 CDK12Q9NYV4 1490 aaPredicted RBP8.11□□□□□ -1.11
HTT-206ENST00000509618 RXRBP28702 533 aa8.1□□□□□ -1.11
HTT-206ENST00000509618 MEX3CQ5U5Q3 659 aaKnown RBP8.1□□□□□ -1.11
HTT-206ENST00000509618 PROSER2Q86WR7 435 aaPredicted RBP8.1□□□□□ -1.11
HTT-206ENST00000509618 TMEM2Q9UHN6 1383 aa8.1□□□□□ -1.11
HTT-206ENST00000509618 AFF2P51816 1311 aa8.09□□□□□ -1.11
HTT-206ENST00000509618 KDM5AP29375 1690 aaKnown RBP8.09□□□□□ -1.11
HTT-206ENST00000509618 SHPRHQ149N8 1683 aa8.09□□□□□ -1.11
HTT-206ENST00000509618 NKTRP30414 1462 aaKnown RBP8.09□□□□□ -1.11
HTT-206ENST00000509618 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
HTT-206ENST00000509618 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
HTT-206ENST00000509618 KCNA6P17658 529 aa8.09□□□□□ -1.11
HTT-206ENST00000509618 ZNF772Q68DY9 489 aaPredicted RBP8.09□□□□□ -1.11
HTT-206ENST00000509618 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
HTT-206ENST00000509618 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
HTT-206ENST00000509618 AHDC1Q5TGY3 1603 aaPredicted RBP8.09□□□□□ -1.11
HTT-206ENST00000509618 FGD6Q6ZV73 1430 aa8.08□□□□□ -1.12
HTT-206ENST00000509618 CFAP65Q6ZU64 1925 aaKnown RBP8.07□□□□□ -1.12
HTT-206ENST00000509618 SPATA31A6Q5VVP1 1343 aa8.07□□□□□ -1.12
HTT-206ENST00000509618 MSH6P52701 1360 aa8.07□□□□□ -1.12
HTT-206ENST00000509618 MTUS2Q5JR59 1369 aa8.06□□□□□ -1.12
HTT-206ENST00000509618 EP400Q96L91 3159 aa8.05□□□□□ -1.12
HTT-206ENST00000509618 EFCAB6Q5THR3 1501 aa8.05□□□□□ -1.12
HTT-206ENST00000509618 DDX17Q92841 729 aaKnown RBP8.05□□□□□ -1.12
HTT-206ENST00000509618 CEP162Q5TB80 1403 aa8.04□□□□□ -1.12
HTT-206ENST00000509618 EHBP1L1Q8N3D4 1523 aa8.04□□□□□ -1.12
HTT-206ENST00000509618 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
HTT-206ENST00000509618 ARHGEF5Q12774 1597 aa8.03□□□□□ -1.12
HTT-206ENST00000509618 BRINP3Q76B58 766 aa8.03□□□□□ -1.12
HTT-206ENST00000509618 C8orf37Q96NL8 207 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms