RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 FOXK1P85037 733 aa4.19□□□□□ -1.74
PDE4D-218ENST00000509368 PLPP6Q8IY26 295 aa4.19□□□□□ -1.74
PDE4D-218ENST00000509368 CAMK2BQ13554 666 aa4.19□□□□□ -1.74
PDE4D-218ENST00000509368 ARHGEF1Q92888 912 aaKnown RBP4.18□□□□□ -1.74
PDE4D-218ENST00000509368 KCTD12Q96CX2 325 aaKnown RBP4.18□□□□□ -1.74
PDE4D-218ENST00000509368 TREML4Q6UXN2 200 aa4.18□□□□□ -1.74
PDE4D-218ENST00000509368 KHSRPQ92945 711 aaKnown RBP eCLIP4.17□□□□□ -1.74
PDE4D-218ENST00000509368 TMC2Q8TDI7 906 aa4.17□□□□□ -1.74
PDE4D-218ENST00000509368 FAM181BA6NEQ2 426 aa4.17□□□□□ -1.74
PDE4D-218ENST00000509368 ITGBL1O95965 494 aaPredicted RBP4.17□□□□□ -1.74
PDE4D-218ENST00000509368 PRIM1P49642 420 aaKnown RBP4.16□□□□□ -1.74
PDE4D-218ENST00000509368 BRPF1P55201 1214 aaPredicted RBP4.16□□□□□ -1.74
PDE4D-218ENST00000509368 ARSIQ5FYB1 569 aa4.16□□□□□ -1.74
PDE4D-218ENST00000509368 SMYD5Q6GMV2 418 aa4.15□□□□□ -1.74
PDE4D-218ENST00000509368 KCNH8Q96L42 1107 aa4.15□□□□□ -1.74
PDE4D-218ENST00000509368 RBM26Q5T8P6 1007 aaKnown RBP4.14□□□□□ -1.75
PDE4D-218ENST00000509368 NYAP1Q6ZVC0 841 aa4.14□□□□□ -1.75
PDE4D-218ENST00000509368 SUZ12Q15022 739 aaKnown RBP4.13□□□□□ -1.75
PDE4D-218ENST00000509368 DDX12PQ92771 950 aa4.13□□□□□ -1.75
PDE4D-218ENST00000509368 TESPA1A2RU30 521 aaPredicted RBP4.13□□□□□ -1.75
PDE4D-218ENST00000509368 OXER1Q8TDS5 423 aa4.13□□□□□ -1.75
PDE4D-218ENST00000509368 ZC3H15Q8WU90 426 aaKnown RBP4.13□□□□□ -1.75
PDE4D-218ENST00000509368 SLC4A5Q9BY07 1137 aa4.13□□□□□ -1.75
PDE4D-218ENST00000509368 ARIH1Q9Y4X5 557 aaPredicted RBP4.13□□□□□ -1.75
PDE4D-218ENST00000509368 ANO8Q9HCE9 1232 aaPredicted RBP4.13□□□□□ -1.75
PDE4D-218ENST00000509368 PDIA6Q15084 440 aa4.12□□□□□ -1.75
PDE4D-218ENST00000509368 GRXCR2A6NFK2 248 aa4.11□□□□□ -1.75
PDE4D-218ENST00000509368 NUDT7P0C024 238 aa4.1□□□□□ -1.75
PDE4D-218ENST00000509368 NEUROD2Q15784 382 aa4.1□□□□□ -1.75
PDE4D-218ENST00000509368 THSD4Q6ZMP0 1018 aa4.1□□□□□ -1.75
PDE4D-218ENST00000509368 KDM4FA0A1W2PPD8 638 aa4.1□□□□□ -1.75
PDE4D-218ENST00000509368 LCE2BO14633 110 aa4.1□□□□□ -1.75
PDE4D-218ENST00000509368 ZMYND10O75800 440 aa4.1□□□□□ -1.75
PDE4D-218ENST00000509368 PTPN5P54829 565 aa4.09□□□□□ -1.75
PDE4D-218ENST00000509368 MAP3K9P80192 1104 aa4.09□□□□□ -1.75
PDE4D-218ENST00000509368 PTCD2Q8WV60 388 aaKnown RBP4.09□□□□□ -1.75
PDE4D-218ENST00000509368 GOLGA8CPA6NN73 597 aa4.09□□□□□ -1.75
PDE4D-218ENST00000509368 WIPF1O43516 503 aa4.09□□□□□ -1.75
PDE4D-218ENST00000509368 EVI5O60447 810 aa4.09□□□□□ -1.75
PDE4D-218ENST00000509368 FECHP22830 423 aa4.09□□□□□ -1.75
PDE4D-218ENST00000509368 SLC34A2O95436 690 aa4.08□□□□□ -1.76
PDE4D-218ENST00000509368 OSBPP22059 807 aa4.08□□□□□ -1.76
PDE4D-218ENST00000509368 CDHR5Q9HBB8 845 aa4.08□□□□□ -1.76
PDE4D-218ENST00000509368 PCDHGA4Q9Y5G9 962 aa4.08□□□□□ -1.76
PDE4D-218ENST00000509368 V9GY48 417 aaPredicted RBP4.08□□□□□ -1.76
PDE4D-218ENST00000509368 GPR37O15354 613 aa4.08□□□□□ -1.76
PDE4D-218ENST00000509368 TSR1Q2NL82 804 aaKnown RBP4.08□□□□□ -1.76
PDE4D-218ENST00000509368 BARGINQ6ZT62 677 aa4.08□□□□□ -1.76
PDE4D-218ENST00000509368 RANGAP1P46060 587 aaPredicted RBP4.07□□□□□ -1.76
PDE4D-218ENST00000509368 PCDHGA10Q9Y5H3 936 aa4.07□□□□□ -1.76
PDE4D-218ENST00000509368 POTEEQ6S8J3 1075 aa4.07□□□□□ -1.76
PDE4D-218ENST00000509368 AK7Q96M32 723 aa4.07□□□□□ -1.76
PDE4D-218ENST00000509368 ZMYND15Q9H091 742 aa4.06□□□□□ -1.76
PDE4D-218ENST00000509368 SLC24A3Q9HC58 644 aa4.06□□□□□ -1.76
PDE4D-218ENST00000509368 LHX6Q9UPM6 363 aa4.06□□□□□ -1.76
PDE4D-218ENST00000509368 KCNC4Q03721 635 aa4.06□□□□□ -1.76
PDE4D-218ENST00000509368 RBM33Q96EV2 1170 aaKnown RBP4.06□□□□□ -1.76
PDE4D-218ENST00000509368 RSPH6AQ9H0K4 717 aa4.06□□□□□ -1.76
PDE4D-218ENST00000509368 FAM161AQ3B820 660 aa4.05□□□□□ -1.76
PDE4D-218ENST00000509368 DGAT1O75907 488 aa4.04□□□□□ -1.76
PDE4D-218ENST00000509368 NPDC1Q9NQX5 325 aaPredicted RBP4.04□□□□□ -1.76
PDE4D-218ENST00000509368 C3orf80F5H4A9 247 aa4.04□□□□□ -1.76
PDE4D-218ENST00000509368 PPP4R3BQ5MIZ7 849 aa4.04□□□□□ -1.76
PDE4D-218ENST00000509368 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
PDE4D-218ENST00000509368 NLRP7Q8WX94 980 aa4.04□□□□□ -1.76
PDE4D-218ENST00000509368 AXIN2Q9Y2T1 843 aa4.03□□□□□ -1.76
PDE4D-218ENST00000509368 ADAM33Q9BZ11 813 aa4.03□□□□□ -1.76
PDE4D-218ENST00000509368 GPIHBP1Q8IV16 184 aa4.03□□□□□ -1.76
PDE4D-218ENST00000509368 NUTM2FA1L443 756 aa4.02□□□□□ -1.77
PDE4D-218ENST00000509368 SUPT5HO00267 1087 aaKnown RBP4.02□□□□□ -1.77
PDE4D-218ENST00000509368 ZNF454Q8N9F8 522 aa4.02□□□□□ -1.77
PDE4D-218ENST00000509368 WNT2BQ93097 391 aa4.02□□□□□ -1.77
PDE4D-218ENST00000509368 PODXL2Q9NZ53 605 aa4.02□□□□□ -1.77
PDE4D-218ENST00000509368 SPDYE16A6NNV3 312 aaPredicted RBP4.01□□□□□ -1.77
PDE4D-218ENST00000509368 MAP3K7O43318 606 aa4.01□□□□□ -1.77
PDE4D-218ENST00000509368 TBC1D12O60347 775 aa4.01□□□□□ -1.77
PDE4D-218ENST00000509368 FOSBP53539 338 aa4.01□□□□□ -1.77
PDE4D-218ENST00000509368 PHOX2BQ99453 314 aa4.01□□□□□ -1.77
PDE4D-218ENST00000509368 GPBP1L1Q9HC44 474 aaPredicted RBP4.01□□□□□ -1.77
PDE4D-218ENST00000509368 COL9A1P20849 921 aa4.01□□□□□ -1.77
PDE4D-218ENST00000509368 EN1Q05925 392 aaPredicted RBP4.01□□□□□ -1.77
PDE4D-218ENST00000509368 FLIIQ13045 1269 aa4.01□□□□□ -1.77
PDE4D-218ENST00000509368 PTGDRQ13258 359 aa4.01□□□□□ -1.77
PDE4D-218ENST00000509368 WFS1O76024 890 aa4□□□□□ -1.77
PDE4D-218ENST00000509368 DMRTA1Q5VZB9 504 aa4□□□□□ -1.77
PDE4D-218ENST00000509368 VPS9D1Q9Y2B5 631 aa4□□□□□ -1.77
PDE4D-218ENST00000509368 FAM198AQ9UFP1 575 aa4□□□□□ -1.77
PDE4D-218ENST00000509368 PSEN2P49810 448 aa3.99□□□□□ -1.77
PDE4D-218ENST00000509368 JPH4Q96JJ6 628 aa3.99□□□□□ -1.77
PDE4D-218ENST00000509368 REPIN1Q9BWE0 567 aaKnown RBP3.99□□□□□ -1.77
PDE4D-218ENST00000509368 GOPCQ9HD26 462 aa3.99□□□□□ -1.77
PDE4D-218ENST00000509368 PHF14O94880 888 aa3.99□□□□□ -1.77
PDE4D-218ENST00000509368 PROX2Q3B8N5 592 aa3.99□□□□□ -1.77
PDE4D-218ENST00000509368 NBPF3Q9H094 633 aa3.99□□□□□ -1.77
PDE4D-218ENST00000509368 C6orf132Q5T0Z8 1188 aa3.98□□□□□ -1.77
PDE4D-218ENST00000509368 KDM4CQ9H3R0 1056 aa3.98□□□□□ -1.77
PDE4D-218ENST00000509368 CCDC102AQ96A19 550 aa3.98□□□□□ -1.77
PDE4D-218ENST00000509368 MRPL50Q8N5N7 158 aaKnown RBP3.97□□□□□ -1.77
PDE4D-218ENST00000509368 KRI1Q8N9T8 703 aaKnown RBP3.97□□□□□ -1.77
PDE4D-218ENST00000509368 ZDHHC16Q969W1 377 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms