RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 KDM5DQ9BY66 1539 aa21.85■■□□□ 1.09
SNCAIP-211ENST00000509023 DEPDC5O75140 1603 aa21.85■■□□□ 1.09
SNCAIP-211ENST00000509023 REREQ9P2R6 1566 aa21.84■■□□□ 1.09
SNCAIP-211ENST00000509023 PZPP20742 1482 aa21.84■■□□□ 1.09
SNCAIP-211ENST00000509023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.09
SNCAIP-211ENST00000509023 BCORL1Q5H9F3 1711 aa21.83■■□□□ 1.09
SNCAIP-211ENST00000509023 MPHOSPH9Q99550 1183 aa21.83■■□□□ 1.09
SNCAIP-211ENST00000509023 RNF17Q9BXT8 1623 aaKnown RBP21.82■■□□□ 1.08
SNCAIP-211ENST00000509023 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
SNCAIP-211ENST00000509023 MROH1Q8NDA8 1641 aa21.81■■□□□ 1.08
SNCAIP-211ENST00000509023 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
SNCAIP-211ENST00000509023 IQGAP3Q86VI3 1631 aa21.8■■□□□ 1.08
SNCAIP-211ENST00000509023 PRDM15P57071 1507 aaPredicted RBP21.8■■□□□ 1.08
SNCAIP-211ENST00000509023 SIGLEC1Q9BZZ2 1709 aa21.78■■□□□ 1.08
SNCAIP-211ENST00000509023 AGLP35573 1532 aa21.77■■□□□ 1.08
SNCAIP-211ENST00000509023 GGT6Q6P531 493 aa21.76■■□□□ 1.07
SNCAIP-211ENST00000509023 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
SNCAIP-211ENST00000509023 KANK1Q14678 1352 aa21.76■■□□□ 1.07
SNCAIP-211ENST00000509023 VWDEQ8N2E2 1590 aa21.76■■□□□ 1.07
SNCAIP-211ENST00000509023 FOXD1Q16676 465 aa21.73■■□□□ 1.07
SNCAIP-211ENST00000509023 PKD2Q13563 968 aa21.72■■□□□ 1.07
SNCAIP-211ENST00000509023 CEP152O94986 1710 aa21.69■■□□□ 1.06
SNCAIP-211ENST00000509023 TET3O43151 1660 aa21.69■■□□□ 1.06
SNCAIP-211ENST00000509023 LMTK2Q8IWU2 1503 aa21.68■■□□□ 1.06
SNCAIP-211ENST00000509023 ARID4BQ4LE39 1312 aaPredicted RBP21.67■■□□□ 1.06
SNCAIP-211ENST00000509023 ABCC3O15438 1527 aa21.67■■□□□ 1.06
SNCAIP-211ENST00000509023 WASHC2CQ9Y4E1 1318 aa21.66■■□□□ 1.06
SNCAIP-211ENST00000509023 MLECQ14165 292 aa21.65■■□□□ 1.06
SNCAIP-211ENST00000509023 ZC3H13Q5T200 1668 aaKnown RBP21.65■■□□□ 1.06
SNCAIP-211ENST00000509023 E9PCH4 1651 aa21.65■■□□□ 1.06
SNCAIP-211ENST00000509023 ANKRD30BQ9BXX2 1392 aa21.65■■□□□ 1.06
SNCAIP-211ENST00000509023 EFCAB6Q5THR3 1501 aa21.64■■□□□ 1.05
SNCAIP-211ENST00000509023 SIN3AQ96ST3 1273 aa21.63■■□□□ 1.05
SNCAIP-211ENST00000509023 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
SNCAIP-211ENST00000509023 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
SNCAIP-211ENST00000509023 CAMSAP1Q5T5Y3 1602 aa21.61■■□□□ 1.05
SNCAIP-211ENST00000509023 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
SNCAIP-211ENST00000509023 CLTCQ00610 1675 aaKnown RBP21.57■■□□□ 1.04
SNCAIP-211ENST00000509023 NPATQ14207 1427 aa21.57■■□□□ 1.04
SNCAIP-211ENST00000509023 RPRD2Q5VT52 1461 aaKnown RBP21.56■■□□□ 1.04
SNCAIP-211ENST00000509023 PLA2R1Q13018 1463 aa21.56■■□□□ 1.04
SNCAIP-211ENST00000509023 SPHKAPQ2M3C7 1700 aa21.54■■□□□ 1.04
SNCAIP-211ENST00000509023 ARHGAP31Q2M1Z3 1444 aa21.54■■□□□ 1.04
SNCAIP-211ENST00000509023 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
SNCAIP-211ENST00000509023 PTPRTO14522 1441 aa21.53■■□□□ 1.04
SNCAIP-211ENST00000509023 TRPM2O94759 1503 aa21.52■■□□□ 1.04
SNCAIP-211ENST00000509023 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
SNCAIP-211ENST00000509023 CNTLNQ9NXG0 1405 aa21.49■■□□□ 1.03
SNCAIP-211ENST00000509023 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
SNCAIP-211ENST00000509023 FER1L4A9Z1Z3 1794 aa21.48■■□□□ 1.03
SNCAIP-211ENST00000509023 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
SNCAIP-211ENST00000509023 ZMYM3Q14202 1370 aa21.46■■□□□ 1.03
SNCAIP-211ENST00000509023 PREX1Q8TCU6 1659 aa21.46■■□□□ 1.03
SNCAIP-211ENST00000509023 NOS1P29475 1434 aa21.46■■□□□ 1.03
SNCAIP-211ENST00000509023 MROH2AA6NES4 1674 aa21.45■■□□□ 1.03
SNCAIP-211ENST00000509023 CLTCL1P53675 1640 aa21.45■■□□□ 1.02
SNCAIP-211ENST00000509023 TIMELESSQ9UNS1 1208 aa21.45■■□□□ 1.02
SNCAIP-211ENST00000509023 UGGT1Q9NYU2 1555 aa21.44■■□□□ 1.02
SNCAIP-211ENST00000509023 ERVK-7P63135 1459 aa21.43■■□□□ 1.02
SNCAIP-211ENST00000509023 SYNMO15061 1565 aa21.43■■□□□ 1.02
SNCAIP-211ENST00000509023 FBXO31Q5XUX0 539 aaPredicted RBP21.43■■□□□ 1.02
SNCAIP-211ENST00000509023 MADDQ8WXG6 1647 aa21.43■■□□□ 1.02
SNCAIP-211ENST00000509023 ADAMTSL3P82987 1691 aa21.42■■□□□ 1.02
SNCAIP-211ENST00000509023 SPATA31D1Q6ZQQ2 1576 aa21.4■■□□□ 1.02
SNCAIP-211ENST00000509023 RIMS1Q86UR5 1692 aaKnown RBP21.38■■□□□ 1.01
SNCAIP-211ENST00000509023 C3P01024 1663 aa21.38■■□□□ 1.01
SNCAIP-211ENST00000509023 PIK3C2BO00750 1634 aa21.38■■□□□ 1.01
SNCAIP-211ENST00000509023 L3MBTL2Q969R5 705 aa21.37■■□□□ 1.01
SNCAIP-211ENST00000509023 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
SNCAIP-211ENST00000509023 KIF1BO60333 1816 aa21.35■■□□□ 1.01
SNCAIP-211ENST00000509023 CEBPAP49715 358 aaPredicted RBP21.35■■□□□ 1.01
SNCAIP-211ENST00000509023 RGL3Q3MIN7 710 aa21.34■■□□□ 1.01
SNCAIP-211ENST00000509023 SLC52A1Q9NWF4 448 aa21.34■■□□□ 1.01
SNCAIP-211ENST00000509023 PPP1R15AO75807 674 aaPredicted RBP21.32■■□□□ 1
SNCAIP-211ENST00000509023 IDI1Q13907 227 aa21.32■■□□□ 1
SNCAIP-211ENST00000509023 NEURL4Q96JN8 1562 aa21.32■■□□□ 1
SNCAIP-211ENST00000509023 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
SNCAIP-211ENST00000509023 ADGRB3O60242 1522 aa21.31■■□□□ 1
SNCAIP-211ENST00000509023 TNRQ92752 1358 aa21.3■■□□□ 1
SNCAIP-211ENST00000509023 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
SNCAIP-211ENST00000509023 DCAF11Q8TEB1 546 aa21.28■■□□□ 1
SNCAIP-211ENST00000509023 TMEM131LA2VDJ0 1609 aa21.25■□□□□ 0.99
SNCAIP-211ENST00000509023 KDM2AQ9Y2K7 1162 aa21.25■□□□□ 0.99
SNCAIP-211ENST00000509023 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
SNCAIP-211ENST00000509023 PTPRMP28827 1452 aa21.23■□□□□ 0.99
SNCAIP-211ENST00000509023 MYO5BQ9ULV0 1848 aa21.23■□□□□ 0.99
SNCAIP-211ENST00000509023 STAG3Q9UJ98 1225 aa21.22■□□□□ 0.99
SNCAIP-211ENST00000509023 NLRP1Q9C000 1473 aa21.22■□□□□ 0.99
SNCAIP-211ENST00000509023 IFT172Q9UG01 1749 aa21.21■□□□□ 0.99
SNCAIP-211ENST00000509023 NBPF8Q3BBV2 869 aa21.2■□□□□ 0.98
SNCAIP-211ENST00000509023 UHRF1BP1Q6BDS2 1440 aa21.2■□□□□ 0.98
SNCAIP-211ENST00000509023 MYO3AQ8NEV4 1616 aa21.19■□□□□ 0.98
SNCAIP-211ENST00000509023 A2ML1A8K2U0 1454 aa21.19■□□□□ 0.98
SNCAIP-211ENST00000509023 PPLO60437 1756 aa21.18■□□□□ 0.98
SNCAIP-211ENST00000509023 RPGRIP1LQ68CZ1 1315 aa21.18■□□□□ 0.98
SNCAIP-211ENST00000509023 PRAG1Q86YV5 1406 aa21.18■□□□□ 0.98
SNCAIP-211ENST00000509023 KDM5AP29375 1690 aaKnown RBP21.17■□□□□ 0.98
SNCAIP-211ENST00000509023 NEXMIFQ5QGS0 1516 aa21.17■□□□□ 0.98
SNCAIP-211ENST00000509023 MYOM2P54296 1465 aa21.17■□□□□ 0.98
SNCAIP-211ENST00000509023 UBR1Q8IWV7 1749 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms