RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 GGT6Q6P531 493 aa9.32□□□□□ -0.92
RACK1-220ENST00000508963 TRIM52Q96A61 297 aa9.32□□□□□ -0.92
RACK1-220ENST00000508963 DHX57Q6P158 1386 aaKnown RBP9.32□□□□□ -0.92
RACK1-220ENST00000508963 BCORL1Q5H9F3 1711 aa9.31□□□□□ -0.92
RACK1-220ENST00000508963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.31□□□□□ -0.92
RACK1-220ENST00000508963 PZPP20742 1482 aa9.31□□□□□ -0.92
RACK1-220ENST00000508963 VWDEQ8N2E2 1590 aa9.3□□□□□ -0.92
RACK1-220ENST00000508963 MROH1Q8NDA8 1641 aa9.3□□□□□ -0.92
RACK1-220ENST00000508963 EIF2AK4Q9P2K8 1649 aaKnown RBP9.3□□□□□ -0.92
RACK1-220ENST00000508963 SLC4A1APQ9BWU0 796 aaKnown RBP9.29□□□□□ -0.92
RACK1-220ENST00000508963 DEPDC5O75140 1603 aa9.29□□□□□ -0.92
RACK1-220ENST00000508963 KDM5DQ9BY66 1539 aa9.29□□□□□ -0.92
RACK1-220ENST00000508963 UNC13BO14795 1591 aa9.29□□□□□ -0.92
RACK1-220ENST00000508963 RNF17Q9BXT8 1623 aaKnown RBP9.28□□□□□ -0.92
RACK1-220ENST00000508963 PKD2Q13563 968 aa9.28□□□□□ -0.92
RACK1-220ENST00000508963 WASHC2CQ9Y4E1 1318 aa9.28□□□□□ -0.92
RACK1-220ENST00000508963 MLECQ14165 292 aa9.27□□□□□ -0.93
RACK1-220ENST00000508963 FOXD1Q16676 465 aa9.27□□□□□ -0.93
RACK1-220ENST00000508963 ARID4BQ4LE39 1312 aaPredicted RBP9.27□□□□□ -0.93
RACK1-220ENST00000508963 PRDM15P57071 1507 aaPredicted RBP9.26□□□□□ -0.93
RACK1-220ENST00000508963 LMTK2Q8IWU2 1503 aa9.26□□□□□ -0.93
RACK1-220ENST00000508963 FAM135AQ9P2D6 1515 aa9.26□□□□□ -0.93
RACK1-220ENST00000508963 KANK1Q14678 1352 aa9.26□□□□□ -0.93
RACK1-220ENST00000508963 ANKRD30BQ9BXX2 1392 aa9.25□□□□□ -0.93
RACK1-220ENST00000508963 IQGAP3Q86VI3 1631 aa9.25□□□□□ -0.93
RACK1-220ENST00000508963 PLA2R1Q13018 1463 aa9.25□□□□□ -0.93
RACK1-220ENST00000508963 ARHGAP31Q2M1Z3 1444 aa9.24□□□□□ -0.93
RACK1-220ENST00000508963 ABCC3O15438 1527 aa9.24□□□□□ -0.93
RACK1-220ENST00000508963 CLSPNQ9HAW4 1339 aa9.24□□□□□ -0.93
RACK1-220ENST00000508963 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
RACK1-220ENST00000508963 PTPRTO14522 1441 aa9.23□□□□□ -0.93
RACK1-220ENST00000508963 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
RACK1-220ENST00000508963 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
RACK1-220ENST00000508963 NPATQ14207 1427 aa9.22□□□□□ -0.93
RACK1-220ENST00000508963 SIN3AQ96ST3 1273 aa9.22□□□□□ -0.93
RACK1-220ENST00000508963 KDM4FA0A1W2PPD8 638 aa9.21□□□□□ -0.94
RACK1-220ENST00000508963 NOS1P29475 1434 aa9.21□□□□□ -0.94
RACK1-220ENST00000508963 CEBPAP49715 358 aaPredicted RBP9.2□□□□□ -0.94
RACK1-220ENST00000508963 CNTLNQ9NXG0 1405 aa9.2□□□□□ -0.94
RACK1-220ENST00000508963 RPRD2Q5VT52 1461 aaKnown RBP9.2□□□□□ -0.94
RACK1-220ENST00000508963 TET3O43151 1660 aa9.2□□□□□ -0.94
RACK1-220ENST00000508963 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
RACK1-220ENST00000508963 ESF1Q9H501 851 aaKnown RBP9.19□□□□□ -0.94
RACK1-220ENST00000508963 EFCAB6Q5THR3 1501 aa9.19□□□□□ -0.94
RACK1-220ENST00000508963 E9PCH4 1651 aa9.19□□□□□ -0.94
RACK1-220ENST00000508963 IDI1Q13907 227 aa9.18□□□□□ -0.94
RACK1-220ENST00000508963 CEP152O94986 1710 aa9.17□□□□□ -0.94
RACK1-220ENST00000508963 ZC3H13Q5T200 1668 aaKnown RBP9.17□□□□□ -0.94
RACK1-220ENST00000508963 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
RACK1-220ENST00000508963 CLTCQ00610 1675 aaKnown RBP9.16□□□□□ -0.94
RACK1-220ENST00000508963 CAMSAP1Q5T5Y3 1602 aa9.16□□□□□ -0.94
RACK1-220ENST00000508963 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
RACK1-220ENST00000508963 NEUROD1Q13562 356 aa9.15□□□□□ -0.94
RACK1-220ENST00000508963 ERVK-7P63135 1459 aa9.15□□□□□ -0.95
RACK1-220ENST00000508963 MROH2AA6NES4 1674 aa9.14□□□□□ -0.95
RACK1-220ENST00000508963 MADDQ8WXG6 1647 aa9.14□□□□□ -0.95
RACK1-220ENST00000508963 SPATA31D1Q6ZQQ2 1576 aa9.14□□□□□ -0.95
RACK1-220ENST00000508963 PTPRMP28827 1452 aa9.14□□□□□ -0.95
RACK1-220ENST00000508963 SYNMO15061 1565 aa9.13□□□□□ -0.95
RACK1-220ENST00000508963 L3MBTL2Q969R5 705 aa9.13□□□□□ -0.95
RACK1-220ENST00000508963 TRPM2O94759 1503 aa9.13□□□□□ -0.95
RACK1-220ENST00000508963 CCDC144AA2RUR9 1427 aa9.13□□□□□ -0.95
RACK1-220ENST00000508963 SPATA31E1Q6ZUB1 1445 aa9.13□□□□□ -0.95
RACK1-220ENST00000508963 PPP1R15AO75807 674 aaPredicted RBP9.12□□□□□ -0.95
RACK1-220ENST00000508963 FER1L4A9Z1Z3 1794 aa9.12□□□□□ -0.95
RACK1-220ENST00000508963 UGGT1Q9NYU2 1555 aa9.12□□□□□ -0.95
RACK1-220ENST00000508963 TNRQ92752 1358 aa9.12□□□□□ -0.95
RACK1-220ENST00000508963 CFAP65Q6ZU64 1925 aaKnown RBP9.11□□□□□ -0.95
RACK1-220ENST00000508963 C3P01024 1663 aa9.11□□□□□ -0.95
RACK1-220ENST00000508963 PREX1Q8TCU6 1659 aa9.11□□□□□ -0.95
RACK1-220ENST00000508963 PIK3C2BO00750 1634 aa9.11□□□□□ -0.95
RACK1-220ENST00000508963 CLTCL1P53675 1640 aa9.1□□□□□ -0.95
RACK1-220ENST00000508963 RGL3Q3MIN7 710 aa9.1□□□□□ -0.95
RACK1-220ENST00000508963 SPHKAPQ2M3C7 1700 aa9.1□□□□□ -0.95
RACK1-220ENST00000508963 RIMS1Q86UR5 1692 aaKnown RBP9.1□□□□□ -0.95
RACK1-220ENST00000508963 NEURL4Q96JN8 1562 aa9.09□□□□□ -0.95
RACK1-220ENST00000508963 ZEB1P37275 1124 aaPredicted RBP9.09□□□□□ -0.95
RACK1-220ENST00000508963 RPGRIP1LQ68CZ1 1315 aa9.08□□□□□ -0.96
RACK1-220ENST00000508963 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
RACK1-220ENST00000508963 STAC3Q96MF2 364 aa9.08□□□□□ -0.96
RACK1-220ENST00000508963 A2ML1A8K2U0 1454 aa9.08□□□□□ -0.96
RACK1-220ENST00000508963 NLRP1Q9C000 1473 aa9.08□□□□□ -0.96
RACK1-220ENST00000508963 SETD1BQ9UPS6 1966 aaKnown RBP9.07□□□□□ -0.96
RACK1-220ENST00000508963 NBPF8Q3BBV2 869 aa9.07□□□□□ -0.96
RACK1-220ENST00000508963 DCAF11Q8TEB1 546 aa9.07□□□□□ -0.96
RACK1-220ENST00000508963 TMEM131LA2VDJ0 1609 aa9.06□□□□□ -0.96
RACK1-220ENST00000508963 CHGAP10645 457 aaKnown RBP9.06□□□□□ -0.96
RACK1-220ENST00000508963 THEMISQ8N1K5 641 aaPredicted RBP9.06□□□□□ -0.96
RACK1-220ENST00000508963 TONSLQ96HA7 1378 aa9.06□□□□□ -0.96
RACK1-220ENST00000508963 ADGRB3O60242 1522 aa9.05□□□□□ -0.96
RACK1-220ENST00000508963 LTKP29376 864 aa9.05□□□□□ -0.96
RACK1-220ENST00000508963 KDM2AQ9Y2K7 1162 aa9.05□□□□□ -0.96
RACK1-220ENST00000508963 ZFYVE9O95405 1425 aa9.05□□□□□ -0.96
RACK1-220ENST00000508963 ADGRF5Q8IZF2 1346 aa9.05□□□□□ -0.96
RACK1-220ENST00000508963 TMEM2Q9UHN6 1383 aa9.04□□□□□ -0.96
RACK1-220ENST00000508963 STAG3Q9UJ98 1225 aa9.04□□□□□ -0.96
RACK1-220ENST00000508963 UHRF1BP1Q6BDS2 1440 aa9.04□□□□□ -0.96
RACK1-220ENST00000508963 ARHGAP23Q9P227 1491 aa9.03□□□□□ -0.96
RACK1-220ENST00000508963 VGFO15240 615 aaPredicted RBP9.03□□□□□ -0.96
RACK1-220ENST00000508963 ZNF326Q5BKZ1 582 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms