RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 LMTK3Q96Q04 1460 aa23.54■■□□□ 1.36
NFKB1-207ENST00000508584 KDM5CP41229 1560 aa23.53■■□□□ 1.36
NFKB1-207ENST00000508584 MYT1LQ9UL68 1186 aa23.53■■□□□ 1.36
NFKB1-207ENST00000508584 SIGLEC1Q9BZZ2 1709 aa23.53■■□□□ 1.36
NFKB1-207ENST00000508584 ERBINQ96RT1 1412 aa23.51■■□□□ 1.35
NFKB1-207ENST00000508584 MLH3Q9UHC1 1453 aa23.49■■□□□ 1.35
NFKB1-207ENST00000508584 MPHOSPH9Q99550 1183 aa23.49■■□□□ 1.35
NFKB1-207ENST00000508584 PZPP20742 1482 aa23.46■■□□□ 1.35
NFKB1-207ENST00000508584 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
NFKB1-207ENST00000508584 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
NFKB1-207ENST00000508584 NUP155O75694 1391 aa23.44■■□□□ 1.34
NFKB1-207ENST00000508584 HSPA2P54652 639 aa23.44■■□□□ 1.34
NFKB1-207ENST00000508584 FER1L4A9Z1Z3 1794 aa23.44■■□□□ 1.34
NFKB1-207ENST00000508584 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
NFKB1-207ENST00000508584 DHX29Q7Z478 1369 aaKnown RBP23.42■■□□□ 1.34
NFKB1-207ENST00000508584 FBXO41Q8TF61 875 aa23.42■■□□□ 1.34
NFKB1-207ENST00000508584 UNC13BO14795 1591 aa23.41■■□□□ 1.34
NFKB1-207ENST00000508584 DIP2CQ9Y2E4 1556 aa23.39■■□□□ 1.33
NFKB1-207ENST00000508584 A2MP01023 1474 aa23.38■■□□□ 1.33
NFKB1-207ENST00000508584 REREQ9P2R6 1566 aa23.37■■□□□ 1.33
NFKB1-207ENST00000508584 CEBPAP49715 358 aaPredicted RBP23.36■■□□□ 1.33
NFKB1-207ENST00000508584 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
NFKB1-207ENST00000508584 ABCA6Q8N139 1617 aa23.35■■□□□ 1.33
NFKB1-207ENST00000508584 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
NFKB1-207ENST00000508584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.35■■□□□ 1.33
NFKB1-207ENST00000508584 FAM135AQ9P2D6 1515 aa23.34■■□□□ 1.33
NFKB1-207ENST00000508584 PKD2Q13563 968 aa23.33■■□□□ 1.33
NFKB1-207ENST00000508584 FOXD1Q16676 465 aa23.33■■□□□ 1.33
NFKB1-207ENST00000508584 ESF1Q9H501 851 aaKnown RBP23.33■■□□□ 1.33
NFKB1-207ENST00000508584 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
NFKB1-207ENST00000508584 KIF3BO15066 747 aa23.31■■□□□ 1.32
NFKB1-207ENST00000508584 AGLP35573 1532 aa23.31■■□□□ 1.32
NFKB1-207ENST00000508584 IQGAP3Q86VI3 1631 aa23.3■■□□□ 1.32
NFKB1-207ENST00000508584 ANKRD30BQ9BXX2 1392 aa23.3■■□□□ 1.32
NFKB1-207ENST00000508584 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
NFKB1-207ENST00000508584 PREX1Q8TCU6 1659 aa23.28■■□□□ 1.32
NFKB1-207ENST00000508584 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
NFKB1-207ENST00000508584 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
NFKB1-207ENST00000508584 KANK1Q14678 1352 aa23.27■■□□□ 1.31
NFKB1-207ENST00000508584 PRDM15P57071 1507 aaPredicted RBP23.24■■□□□ 1.31
NFKB1-207ENST00000508584 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
NFKB1-207ENST00000508584 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
NFKB1-207ENST00000508584 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
NFKB1-207ENST00000508584 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
NFKB1-207ENST00000508584 DMRT2Q9Y5R5 561 aa23.21■■□□□ 1.31
NFKB1-207ENST00000508584 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
NFKB1-207ENST00000508584 CERKQ8TCT0 537 aa23.18■■□□□ 1.3
NFKB1-207ENST00000508584 C3P01024 1663 aa23.18■■□□□ 1.3
NFKB1-207ENST00000508584 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
NFKB1-207ENST00000508584 GGT6Q6P531 493 aa23.15■■□□□ 1.3
NFKB1-207ENST00000508584 TET3O43151 1660 aa23.15■■□□□ 1.3
NFKB1-207ENST00000508584 LMTK2Q8IWU2 1503 aa23.14■■□□□ 1.3
NFKB1-207ENST00000508584 ZMYM3Q14202 1370 aa23.11■■□□□ 1.29
NFKB1-207ENST00000508584 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
NFKB1-207ENST00000508584 NPATQ14207 1427 aa23.09■■□□□ 1.29
NFKB1-207ENST00000508584 SETD1BQ9UPS6 1966 aaKnown RBP23.09■■□□□ 1.29
NFKB1-207ENST00000508584 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
NFKB1-207ENST00000508584 E9PCH4 1651 aa23.09■■□□□ 1.29
NFKB1-207ENST00000508584 ABCC3O15438 1527 aa23.08■■□□□ 1.29
NFKB1-207ENST00000508584 EFCAB6Q5THR3 1501 aa23.08■■□□□ 1.29
NFKB1-207ENST00000508584 STRCQ7RTU9 1775 aa23.08■■□□□ 1.29
NFKB1-207ENST00000508584 WASHC2CQ9Y4E1 1318 aa23.08■■□□□ 1.28
NFKB1-207ENST00000508584 MROH2AA6NES4 1674 aa23.07■■□□□ 1.28
NFKB1-207ENST00000508584 CCDC144AA2RUR9 1427 aa23.07■■□□□ 1.28
NFKB1-207ENST00000508584 PTPRTO14522 1441 aa23.06■■□□□ 1.28
NFKB1-207ENST00000508584 L3MBTL2Q969R5 705 aa23.05■■□□□ 1.28
NFKB1-207ENST00000508584 CEP152O94986 1710 aa23.05■■□□□ 1.28
NFKB1-207ENST00000508584 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
NFKB1-207ENST00000508584 TRPM2O94759 1503 aa23.03■■□□□ 1.28
NFKB1-207ENST00000508584 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
NFKB1-207ENST00000508584 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
NFKB1-207ENST00000508584 CAMSAP1Q5T5Y3 1602 aa22.99■■□□□ 1.27
NFKB1-207ENST00000508584 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
NFKB1-207ENST00000508584 ARHGAP31Q2M1Z3 1444 aa22.97■■□□□ 1.27
NFKB1-207ENST00000508584 CLTCL1P53675 1640 aa22.92■■□□□ 1.26
NFKB1-207ENST00000508584 NCKAP5LQ9HCH0 1330 aa22.91■■□□□ 1.26
NFKB1-207ENST00000508584 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
NFKB1-207ENST00000508584 ZNF316A6NFI3 1004 aaPredicted RBP22.9■■□□□ 1.26
NFKB1-207ENST00000508584 NOS1P29475 1434 aa22.9■■□□□ 1.26
NFKB1-207ENST00000508584 SPATA31E1Q6ZUB1 1445 aa22.9■■□□□ 1.26
NFKB1-207ENST00000508584 CEP170BQ9Y4F5 1589 aaPredicted RBP22.89■■□□□ 1.25
NFKB1-207ENST00000508584 ZNF142P52746 1687 aaPredicted RBP22.87■■□□□ 1.25
NFKB1-207ENST00000508584 LTBP4Q8N2S1 1624 aa22.87■■□□□ 1.25
NFKB1-207ENST00000508584 RGL3Q3MIN7 710 aa22.87■■□□□ 1.25
NFKB1-207ENST00000508584 UGGT1Q9NYU2 1555 aa22.86■■□□□ 1.25
NFKB1-207ENST00000508584 NBPF8Q3BBV2 869 aa22.86■■□□□ 1.25
NFKB1-207ENST00000508584 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
NFKB1-207ENST00000508584 IQSEC2Q5JU85 1478 aa22.84■■□□□ 1.25
NFKB1-207ENST00000508584 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
NFKB1-207ENST00000508584 A2ML1A8K2U0 1454 aa22.83■■□□□ 1.25
NFKB1-207ENST00000508584 SYNMO15061 1565 aa22.82■■□□□ 1.24
NFKB1-207ENST00000508584 TNRQ92752 1358 aa22.82■■□□□ 1.24
NFKB1-207ENST00000508584 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
NFKB1-207ENST00000508584 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
NFKB1-207ENST00000508584 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
NFKB1-207ENST00000508584 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
NFKB1-207ENST00000508584 ZNF335Q9H4Z2 1342 aaPredicted RBP22.8■■□□□ 1.24
NFKB1-207ENST00000508584 SLC52A1Q9NWF4 448 aa22.78■■□□□ 1.24
NFKB1-207ENST00000508584 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
NFKB1-207ENST00000508584 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms