RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 GGT6Q6P531 493 aa16.29■□□□□ 0.2
BRCC3P1-201ENST00000508559 KANK1Q14678 1352 aa16.28■□□□□ 0.2
BRCC3P1-201ENST00000508559 NUP155O75694 1391 aa16.26■□□□□ 0.19
BRCC3P1-201ENST00000508559 MLECQ14165 292 aa16.26■□□□□ 0.19
BRCC3P1-201ENST00000508559 ESF1Q9H501 851 aaKnown RBP16.25■□□□□ 0.19
BRCC3P1-201ENST00000508559 EIF2AK4Q9P2K8 1649 aaKnown RBP16.24■□□□□ 0.19
BRCC3P1-201ENST00000508559 REREQ9P2R6 1566 aa16.23■□□□□ 0.19
BRCC3P1-201ENST00000508559 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
BRCC3P1-201ENST00000508559 FOXD1Q16676 465 aa16.22■□□□□ 0.19
BRCC3P1-201ENST00000508559 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
BRCC3P1-201ENST00000508559 WASHC2CQ9Y4E1 1318 aa16.2■□□□□ 0.18
BRCC3P1-201ENST00000508559 AGLP35573 1532 aa16.2■□□□□ 0.18
BRCC3P1-201ENST00000508559 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
BRCC3P1-201ENST00000508559 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
BRCC3P1-201ENST00000508559 UNC13BO14795 1591 aa16.17■□□□□ 0.18
BRCC3P1-201ENST00000508559 RNF17Q9BXT8 1623 aaKnown RBP16.16■□□□□ 0.18
BRCC3P1-201ENST00000508559 PKD2Q13563 968 aa16.15■□□□□ 0.18
BRCC3P1-201ENST00000508559 BCORL1Q5H9F3 1711 aa16.15■□□□□ 0.18
BRCC3P1-201ENST00000508559 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.18
BRCC3P1-201ENST00000508559 DEPDC5O75140 1603 aa16.14■□□□□ 0.17
BRCC3P1-201ENST00000508559 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.17
BRCC3P1-201ENST00000508559 KDM5DQ9BY66 1539 aa16.13■□□□□ 0.17
BRCC3P1-201ENST00000508559 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
BRCC3P1-201ENST00000508559 PZPP20742 1482 aa16.12■□□□□ 0.17
BRCC3P1-201ENST00000508559 IQGAP3Q86VI3 1631 aa16.12■□□□□ 0.17
BRCC3P1-201ENST00000508559 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
BRCC3P1-201ENST00000508559 MROH1Q8NDA8 1641 aa16.1■□□□□ 0.17
BRCC3P1-201ENST00000508559 ABCC3O15438 1527 aa16.09■□□□□ 0.17
BRCC3P1-201ENST00000508559 CNTLNQ9NXG0 1405 aa16.09■□□□□ 0.17
BRCC3P1-201ENST00000508559 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
BRCC3P1-201ENST00000508559 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
BRCC3P1-201ENST00000508559 CEP152O94986 1710 aa16.08■□□□□ 0.16
BRCC3P1-201ENST00000508559 LMTK2Q8IWU2 1503 aa16.07■□□□□ 0.16
BRCC3P1-201ENST00000508559 TET3O43151 1660 aa16.07■□□□□ 0.16
BRCC3P1-201ENST00000508559 ZC3H13Q5T200 1668 aaKnown RBP16.07■□□□□ 0.16
BRCC3P1-201ENST00000508559 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
BRCC3P1-201ENST00000508559 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
BRCC3P1-201ENST00000508559 EFCAB6Q5THR3 1501 aa16.04■□□□□ 0.16
BRCC3P1-201ENST00000508559 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
BRCC3P1-201ENST00000508559 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
BRCC3P1-201ENST00000508559 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
BRCC3P1-201ENST00000508559 FER1L4A9Z1Z3 1794 aa16.02■□□□□ 0.15
BRCC3P1-201ENST00000508559 RPRD2Q5VT52 1461 aaKnown RBP16.01■□□□□ 0.15
BRCC3P1-201ENST00000508559 NPATQ14207 1427 aa16.01■□□□□ 0.15
BRCC3P1-201ENST00000508559 ARHGAP31Q2M1Z3 1444 aa16.01■□□□□ 0.15
BRCC3P1-201ENST00000508559 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
BRCC3P1-201ENST00000508559 E9PCH4 1651 aa15.99■□□□□ 0.15
BRCC3P1-201ENST00000508559 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
BRCC3P1-201ENST00000508559 CEBPAP49715 358 aaPredicted RBP15.99■□□□□ 0.15
BRCC3P1-201ENST00000508559 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
BRCC3P1-201ENST00000508559 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
BRCC3P1-201ENST00000508559 RIMS1Q86UR5 1692 aaKnown RBP15.98■□□□□ 0.15
BRCC3P1-201ENST00000508559 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
BRCC3P1-201ENST00000508559 SIN3AQ96ST3 1273 aa15.97■□□□□ 0.15
BRCC3P1-201ENST00000508559 CFAP65Q6ZU64 1925 aaKnown RBP15.97■□□□□ 0.15
BRCC3P1-201ENST00000508559 MROH2AA6NES4 1674 aa15.96■□□□□ 0.15
BRCC3P1-201ENST00000508559 ADAMTSL3P82987 1691 aa15.96■□□□□ 0.15
BRCC3P1-201ENST00000508559 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
BRCC3P1-201ENST00000508559 PTPRTO14522 1441 aa15.94■□□□□ 0.14
BRCC3P1-201ENST00000508559 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
BRCC3P1-201ENST00000508559 TNRQ92752 1358 aa15.94■□□□□ 0.14
BRCC3P1-201ENST00000508559 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
BRCC3P1-201ENST00000508559 SPHKAPQ2M3C7 1700 aa15.94■□□□□ 0.14
BRCC3P1-201ENST00000508559 TRPM2O94759 1503 aa15.93■□□□□ 0.14
BRCC3P1-201ENST00000508559 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
BRCC3P1-201ENST00000508559 NOS1P29475 1434 aa15.92■□□□□ 0.14
BRCC3P1-201ENST00000508559 PREX1Q8TCU6 1659 aa15.92■□□□□ 0.14
BRCC3P1-201ENST00000508559 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
BRCC3P1-201ENST00000508559 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
BRCC3P1-201ENST00000508559 C3P01024 1663 aa15.9■□□□□ 0.14
BRCC3P1-201ENST00000508559 RGL3Q3MIN7 710 aa15.9■□□□□ 0.14
BRCC3P1-201ENST00000508559 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
BRCC3P1-201ENST00000508559 PTPRMP28827 1452 aa15.9■□□□□ 0.14
BRCC3P1-201ENST00000508559 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
BRCC3P1-201ENST00000508559 IDI1Q13907 227 aa15.89■□□□□ 0.13
BRCC3P1-201ENST00000508559 SPATA31D1Q6ZQQ2 1576 aa15.88■□□□□ 0.13
BRCC3P1-201ENST00000508559 SYNMO15061 1565 aa15.87■□□□□ 0.13
BRCC3P1-201ENST00000508559 UGGT1Q9NYU2 1555 aa15.87■□□□□ 0.13
BRCC3P1-201ENST00000508559 CLTCL1P53675 1640 aa15.86■□□□□ 0.13
BRCC3P1-201ENST00000508559 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
BRCC3P1-201ENST00000508559 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
BRCC3P1-201ENST00000508559 KDM2AQ9Y2K7 1162 aa15.83■□□□□ 0.12
BRCC3P1-201ENST00000508559 KIF1BO60333 1816 aa15.82■□□□□ 0.12
BRCC3P1-201ENST00000508559 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
BRCC3P1-201ENST00000508559 L3MBTL2Q969R5 705 aa15.82■□□□□ 0.12
BRCC3P1-201ENST00000508559 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
BRCC3P1-201ENST00000508559 UHRF1BP1Q6BDS2 1440 aa15.8■□□□□ 0.12
BRCC3P1-201ENST00000508559 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
BRCC3P1-201ENST00000508559 THEMISQ8N1K5 641 aaPredicted RBP15.8■□□□□ 0.12
BRCC3P1-201ENST00000508559 RPGRIP1LQ68CZ1 1315 aa15.79■□□□□ 0.12
BRCC3P1-201ENST00000508559 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
BRCC3P1-201ENST00000508559 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
BRCC3P1-201ENST00000508559 SETD1BQ9UPS6 1966 aaKnown RBP15.78■□□□□ 0.12
BRCC3P1-201ENST00000508559 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
BRCC3P1-201ENST00000508559 SPATA31E1Q6ZUB1 1445 aa15.78■□□□□ 0.12
BRCC3P1-201ENST00000508559 MYO3AQ8NEV4 1616 aa15.76■□□□□ 0.11
BRCC3P1-201ENST00000508559 VGFO15240 615 aaPredicted RBP15.76■□□□□ 0.11
BRCC3P1-201ENST00000508559 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.76■□□□□ 0.11
BRCC3P1-201ENST00000508559 BCANQ96GW7 911 aa15.76■□□□□ 0.11
BRCC3P1-201ENST00000508559 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms