RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 CNTLNQ9NXG0 1405 aa19.05■□□□□ 0.64
PTPN20-218ENST00000508357 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
PTPN20-218ENST00000508357 DEPDC5O75140 1603 aa19.04■□□□□ 0.64
PTPN20-218ENST00000508357 CHIC2Q9UKJ5 165 aa19.04■□□□□ 0.64
PTPN20-218ENST00000508357 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
PTPN20-218ENST00000508357 KIF3BO15066 747 aa19.03■□□□□ 0.64
PTPN20-218ENST00000508357 PRDM15P57071 1507 aaPredicted RBP19.03■□□□□ 0.64
PTPN20-218ENST00000508357 ANKRD30AQ9BXX3 1397 aa19.03■□□□□ 0.64
PTPN20-218ENST00000508357 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
PTPN20-218ENST00000508357 CEBPAP49715 358 aaPredicted RBP19.02■□□□□ 0.64
PTPN20-218ENST00000508357 GGT6Q6P531 493 aa19.02■□□□□ 0.64
PTPN20-218ENST00000508357 RRP7BPQ9NSQ0 103 aa19.02■□□□□ 0.64
PTPN20-218ENST00000508357 ABCC3O15438 1527 aa19■□□□□ 0.63
PTPN20-218ENST00000508357 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
PTPN20-218ENST00000508357 ZC3H13Q5T200 1668 aaKnown RBP18.99■□□□□ 0.63
PTPN20-218ENST00000508357 CEP152O94986 1710 aa18.99■□□□□ 0.63
PTPN20-218ENST00000508357 PREX1Q8TCU6 1659 aa18.98■□□□□ 0.63
PTPN20-218ENST00000508357 ROCK1Q13464 1354 aa18.98■□□□□ 0.63
PTPN20-218ENST00000508357 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
PTPN20-218ENST00000508357 VWDEQ8N2E2 1590 aa18.97■□□□□ 0.63
PTPN20-218ENST00000508357 CAMSAP1Q5T5Y3 1602 aa18.95■□□□□ 0.62
PTPN20-218ENST00000508357 ANKRD50Q9ULJ7 1429 aa18.94■□□□□ 0.62
PTPN20-218ENST00000508357 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
PTPN20-218ENST00000508357 NPATQ14207 1427 aa18.93■□□□□ 0.62
PTPN20-218ENST00000508357 PZPP20742 1482 aa18.93■□□□□ 0.62
PTPN20-218ENST00000508357 UNC13BO14795 1591 aa18.93■□□□□ 0.62
PTPN20-218ENST00000508357 MYO3AQ8NEV4 1616 aa18.92■□□□□ 0.62
PTPN20-218ENST00000508357 ITGAEP38570 1179 aa18.92■□□□□ 0.62
PTPN20-218ENST00000508357 ESF1Q9H501 851 aaKnown RBP18.92■□□□□ 0.62
PTPN20-218ENST00000508357 GCC2Q8IWJ2 1684 aa18.91■□□□□ 0.62
PTPN20-218ENST00000508357 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
PTPN20-218ENST00000508357 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
PTPN20-218ENST00000508357 WASHC2CQ9Y4E1 1318 aa18.88■□□□□ 0.61
PTPN20-218ENST00000508357 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
PTPN20-218ENST00000508357 SPATA31D1Q6ZQQ2 1576 aa18.87■□□□□ 0.61
PTPN20-218ENST00000508357 EFCAB6Q5THR3 1501 aa18.86■□□□□ 0.61
PTPN20-218ENST00000508357 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
PTPN20-218ENST00000508357 NAIPQ13075 1403 aa18.85■□□□□ 0.61
PTPN20-218ENST00000508357 SETD1BQ9UPS6 1966 aaKnown RBP18.85■□□□□ 0.61
PTPN20-218ENST00000508357 CEP170BQ9Y4F5 1589 aaPredicted RBP18.85■□□□□ 0.61
PTPN20-218ENST00000508357 HSPA2P54652 639 aa18.84■□□□□ 0.61
PTPN20-218ENST00000508357 FBXO31Q5XUX0 539 aaPredicted RBP18.84■□□□□ 0.61
PTPN20-218ENST00000508357 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.61
PTPN20-218ENST00000508357 IQGAP3Q86VI3 1631 aa18.83■□□□□ 0.61
PTPN20-218ENST00000508357 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
PTPN20-218ENST00000508357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
PTPN20-218ENST00000508357 TET3O43151 1660 aa18.82■□□□□ 0.6
PTPN20-218ENST00000508357 TNRQ92752 1358 aa18.81■□□□□ 0.6
PTPN20-218ENST00000508357 KANK1Q14678 1352 aa18.8■□□□□ 0.6
PTPN20-218ENST00000508357 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
PTPN20-218ENST00000508357 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
PTPN20-218ENST00000508357 SYNMO15061 1565 aa18.78■□□□□ 0.6
PTPN20-218ENST00000508357 E9PCH4 1651 aa18.76■□□□□ 0.59
PTPN20-218ENST00000508357 NLRP1Q9C000 1473 aa18.75■□□□□ 0.59
PTPN20-218ENST00000508357 CFAP65Q6ZU64 1925 aaKnown RBP18.74■□□□□ 0.59
PTPN20-218ENST00000508357 NOS1P29475 1434 aa18.74■□□□□ 0.59
PTPN20-218ENST00000508357 RPRD2Q5VT52 1461 aaKnown RBP18.72■□□□□ 0.59
PTPN20-218ENST00000508357 NUP155O75694 1391 aa18.71■□□□□ 0.59
PTPN20-218ENST00000508357 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
PTPN20-218ENST00000508357 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
PTPN20-218ENST00000508357 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
PTPN20-218ENST00000508357 UGGT1Q9NYU2 1555 aa18.69■□□□□ 0.58
PTPN20-218ENST00000508357 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
PTPN20-218ENST00000508357 POLR1AO95602 1720 aaPredicted RBP18.65■□□□□ 0.58
PTPN20-218ENST00000508357 ADGRB3O60242 1522 aa18.64■□□□□ 0.57
PTPN20-218ENST00000508357 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
PTPN20-218ENST00000508357 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
PTPN20-218ENST00000508357 ARHGAP23Q9P227 1491 aa18.61■□□□□ 0.57
PTPN20-218ENST00000508357 SETD5Q9C0A6 1442 aa18.61■□□□□ 0.57
PTPN20-218ENST00000508357 SLIT1O75093 1534 aa18.6■□□□□ 0.57
PTPN20-218ENST00000508357 PTPRTO14522 1441 aa18.6■□□□□ 0.57
PTPN20-218ENST00000508357 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
PTPN20-218ENST00000508357 TRPM2O94759 1503 aa18.59■□□□□ 0.57
PTPN20-218ENST00000508357 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.57
PTPN20-218ENST00000508357 RAB3GAP2Q9H2M9 1393 aa18.58■□□□□ 0.57
PTPN20-218ENST00000508357 IDI1Q13907 227 aa18.58■□□□□ 0.56
PTPN20-218ENST00000508357 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.56
PTPN20-218ENST00000508357 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
PTPN20-218ENST00000508357 MED14O60244 1454 aa18.55■□□□□ 0.56
PTPN20-218ENST00000508357 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
PTPN20-218ENST00000508357 TRIM52Q96A61 297 aa18.54■□□□□ 0.56
PTPN20-218ENST00000508357 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
PTPN20-218ENST00000508357 PKD2Q13563 968 aa18.53■□□□□ 0.56
PTPN20-218ENST00000508357 TMEM2Q9UHN6 1383 aa18.53■□□□□ 0.56
PTPN20-218ENST00000508357 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.56
PTPN20-218ENST00000508357 SLC52A1Q9NWF4 448 aa18.52■□□□□ 0.56
PTPN20-218ENST00000508357 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
PTPN20-218ENST00000508357 NPHP4O75161 1426 aaPredicted RBP18.5■□□□□ 0.55
PTPN20-218ENST00000508357 LTBP4Q8N2S1 1624 aa18.5■□□□□ 0.55
PTPN20-218ENST00000508357 LTKP29376 864 aa18.49■□□□□ 0.55
PTPN20-218ENST00000508357 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
PTPN20-218ENST00000508357 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
PTPN20-218ENST00000508357 ANKLE2Q86XL3 938 aa18.47■□□□□ 0.55
PTPN20-218ENST00000508357 MPHOSPH9Q99550 1183 aa18.45■□□□□ 0.54
PTPN20-218ENST00000508357 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
PTPN20-218ENST00000508357 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
PTPN20-218ENST00000508357 ZNF335Q9H4Z2 1342 aaPredicted RBP18.44■□□□□ 0.54
PTPN20-218ENST00000508357 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
PTPN20-218ENST00000508357 STRCP1A6NGW2 1772 aa18.42■□□□□ 0.54
PTPN20-218ENST00000508357 KIF1BO60333 1816 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms