RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 CHIC2Q9UKJ5 165 aa25.11■■□□□ 1.61
DDR1-261ENST00000507901 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
DDR1-261ENST00000507901 DEPDC5O75140 1603 aa25.11■■□□□ 1.61
DDR1-261ENST00000507901 CLTCQ00610 1675 aaKnown RBP25.1■■□□□ 1.61
DDR1-261ENST00000507901 RRP7BPQ9NSQ0 103 aa25.1■■□□□ 1.61
DDR1-261ENST00000507901 KIF3BO15066 747 aa25.09■■□□□ 1.61
DDR1-261ENST00000507901 PRDM15P57071 1507 aaPredicted RBP25.07■■□□□ 1.6
DDR1-261ENST00000507901 KDM5DQ9BY66 1539 aa25.07■■□□□ 1.6
DDR1-261ENST00000507901 GGT6Q6P531 493 aa25.06■■□□□ 1.6
DDR1-261ENST00000507901 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
DDR1-261ENST00000507901 PLPPR3Q6T4P5 718 aa25.03■■□□□ 1.6
DDR1-261ENST00000507901 ABCC3O15438 1527 aa25.02■■□□□ 1.6
DDR1-261ENST00000507901 VWDEQ8N2E2 1590 aa25.02■■□□□ 1.6
DDR1-261ENST00000507901 ZMYM3Q14202 1370 aa25.01■■□□□ 1.59
DDR1-261ENST00000507901 ANKRD50Q9ULJ7 1429 aa25.01■■□□□ 1.59
DDR1-261ENST00000507901 CEBPAP49715 358 aaPredicted RBP24.99■■□□□ 1.59
DDR1-261ENST00000507901 SETD1BQ9UPS6 1966 aaKnown RBP24.98■■□□□ 1.59
DDR1-261ENST00000507901 CEP152O94986 1710 aa24.98■■□□□ 1.59
DDR1-261ENST00000507901 LMTK3Q96Q04 1460 aa24.97■■□□□ 1.59
DDR1-261ENST00000507901 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
DDR1-261ENST00000507901 NPATQ14207 1427 aa24.96■■□□□ 1.59
DDR1-261ENST00000507901 UNC13BO14795 1591 aa24.96■■□□□ 1.59
DDR1-261ENST00000507901 GCC2Q8IWJ2 1684 aa24.95■■□□□ 1.58
DDR1-261ENST00000507901 PREX1Q8TCU6 1659 aa24.95■■□□□ 1.58
DDR1-261ENST00000507901 ITGAEP38570 1179 aa24.95■■□□□ 1.58
DDR1-261ENST00000507901 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
DDR1-261ENST00000507901 PZPP20742 1482 aa24.94■■□□□ 1.58
DDR1-261ENST00000507901 CAMSAP1Q5T5Y3 1602 aa24.94■■□□□ 1.58
DDR1-261ENST00000507901 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
DDR1-261ENST00000507901 NAIPQ13075 1403 aa24.91■■□□□ 1.58
DDR1-261ENST00000507901 HFM1A2PYH4 1435 aa24.89■■□□□ 1.58
DDR1-261ENST00000507901 ARHGAP31Q2M1Z3 1444 aa24.88■■□□□ 1.57
DDR1-261ENST00000507901 SPATA31D1Q6ZQQ2 1576 aa24.86■■□□□ 1.57
DDR1-261ENST00000507901 HSPA2P54652 639 aa24.86■■□□□ 1.57
DDR1-261ENST00000507901 MYO3AQ8NEV4 1616 aa24.85■■□□□ 1.57
DDR1-261ENST00000507901 ZNF142P52746 1687 aaPredicted RBP24.85■■□□□ 1.57
DDR1-261ENST00000507901 IQGAP3Q86VI3 1631 aa24.84■■□□□ 1.57
DDR1-261ENST00000507901 EFCAB6Q5THR3 1501 aa24.84■■□□□ 1.57
DDR1-261ENST00000507901 KANK1Q14678 1352 aa24.82■■□□□ 1.56
DDR1-261ENST00000507901 TET3O43151 1660 aa24.81■■□□□ 1.56
DDR1-261ENST00000507901 UHRF1BP1Q6BDS2 1440 aa24.81■■□□□ 1.56
DDR1-261ENST00000507901 ERVK-7P63135 1459 aa24.81■■□□□ 1.56
DDR1-261ENST00000507901 FBXO31Q5XUX0 539 aaPredicted RBP24.8■■□□□ 1.56
DDR1-261ENST00000507901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.56
DDR1-261ENST00000507901 CEP170BQ9Y4F5 1589 aaPredicted RBP24.76■■□□□ 1.55
DDR1-261ENST00000507901 CFAP65Q6ZU64 1925 aaKnown RBP24.76■■□□□ 1.55
DDR1-261ENST00000507901 TNRQ92752 1358 aa24.76■■□□□ 1.55
DDR1-261ENST00000507901 RPRD2Q5VT52 1461 aaKnown RBP24.75■■□□□ 1.55
DDR1-261ENST00000507901 E9PCH4 1651 aa24.73■■□□□ 1.55
DDR1-261ENST00000507901 A2ML1A8K2U0 1454 aa24.73■■□□□ 1.55
DDR1-261ENST00000507901 NOS1P29475 1434 aa24.72■■□□□ 1.55
DDR1-261ENST00000507901 NLRP1Q9C000 1473 aa24.71■■□□□ 1.55
DDR1-261ENST00000507901 NUP155O75694 1391 aa24.71■■□□□ 1.55
DDR1-261ENST00000507901 ILDR1Q86SU0 546 aaPredicted RBP24.71■■□□□ 1.55
DDR1-261ENST00000507901 SYNMO15061 1565 aa24.71■■□□□ 1.55
DDR1-261ENST00000507901 STRCQ7RTU9 1775 aa24.7■■□□□ 1.54
DDR1-261ENST00000507901 DMRT2Q9Y5R5 561 aa24.66■■□□□ 1.54
DDR1-261ENST00000507901 PLA2R1Q13018 1463 aa24.64■■□□□ 1.53
DDR1-261ENST00000507901 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
DDR1-261ENST00000507901 PIK3C2BO00750 1634 aa24.63■■□□□ 1.53
DDR1-261ENST00000507901 UBR1Q8IWV7 1749 aa24.63■■□□□ 1.53
DDR1-261ENST00000507901 KDM5AP29375 1690 aaKnown RBP24.62■■□□□ 1.53
DDR1-261ENST00000507901 UGGT1Q9NYU2 1555 aa24.61■■□□□ 1.53
DDR1-261ENST00000507901 PTPRTO14522 1441 aa24.58■■□□□ 1.53
DDR1-261ENST00000507901 SPHKAPQ2M3C7 1700 aa24.57■■□□□ 1.52
DDR1-261ENST00000507901 FBXO41Q8TF61 875 aa24.56■■□□□ 1.52
DDR1-261ENST00000507901 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
DDR1-261ENST00000507901 ARHGAP23Q9P227 1491 aa24.53■■□□□ 1.52
DDR1-261ENST00000507901 IDI1Q13907 227 aa24.53■■□□□ 1.52
DDR1-261ENST00000507901 POLR1AO95602 1720 aaPredicted RBP24.52■■□□□ 1.52
DDR1-261ENST00000507901 ADGRB3O60242 1522 aa24.52■■□□□ 1.52
DDR1-261ENST00000507901 NEURL4Q96JN8 1562 aa24.52■■□□□ 1.52
DDR1-261ENST00000507901 SLC52A1Q9NWF4 448 aa24.52■■□□□ 1.52
DDR1-261ENST00000507901 SLIT1O75093 1534 aa24.51■■□□□ 1.51
DDR1-261ENST00000507901 TRPM2O94759 1503 aa24.51■■□□□ 1.51
DDR1-261ENST00000507901 ACIN1Q9UKV3 1341 aaKnown RBP24.5■■□□□ 1.51
DDR1-261ENST00000507901 TMEM131LA2VDJ0 1609 aa24.5■■□□□ 1.51
DDR1-261ENST00000507901 HRCP23327 699 aa24.49■■□□□ 1.51
DDR1-261ENST00000507901 THEMISQ8N1K5 641 aaPredicted RBP24.49■■□□□ 1.51
DDR1-261ENST00000507901 TRIM52Q96A61 297 aa24.49■■□□□ 1.51
DDR1-261ENST00000507901 MYO5BQ9ULV0 1848 aa24.49■■□□□ 1.51
DDR1-261ENST00000507901 CERKQ8TCT0 537 aa24.48■■□□□ 1.51
DDR1-261ENST00000507901 PKD2Q13563 968 aa24.47■■□□□ 1.51
DDR1-261ENST00000507901 CLTCL1P53675 1640 aa24.46■■□□□ 1.51
DDR1-261ENST00000507901 MED14O60244 1454 aa24.45■■□□□ 1.51
DDR1-261ENST00000507901 SLC4A1APQ9BWU0 796 aaKnown RBP24.45■■□□□ 1.5
DDR1-261ENST00000507901 NCKAP5LQ9HCH0 1330 aa24.44■■□□□ 1.5
DDR1-261ENST00000507901 MPHOSPH9Q99550 1183 aa24.43■■□□□ 1.5
DDR1-261ENST00000507901 TMEM2Q9UHN6 1383 aa24.42■■□□□ 1.5
DDR1-261ENST00000507901 ZFYVE9O95405 1425 aa24.4■■□□□ 1.5
DDR1-261ENST00000507901 SCAF11Q99590 1463 aaKnown RBP24.38■■□□□ 1.49
DDR1-261ENST00000507901 ANKLE2Q86XL3 938 aa24.38■■□□□ 1.49
DDR1-261ENST00000507901 IQGAP1P46940 1657 aa24.37■■□□□ 1.49
DDR1-261ENST00000507901 LTKP29376 864 aa24.37■■□□□ 1.49
DDR1-261ENST00000507901 KIF1BO60333 1816 aa24.35■■□□□ 1.49
DDR1-261ENST00000507901 NPHP4O75161 1426 aaPredicted RBP24.35■■□□□ 1.49
DDR1-261ENST00000507901 FOXD1Q16676 465 aa24.34■■□□□ 1.49
DDR1-261ENST00000507901 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
DDR1-261ENST00000507901 STAG3Q9UJ98 1225 aa24.32■■□□□ 1.48
DDR1-261ENST00000507901 RIMS2Q9UQ26 1411 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms