RNA–Protein interactions for RNA: ENST00000507261.1

RACK1-215, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-215ENST00000507261 TRIM52Q96A61 297 aa12.63□□□□□ -0.39
RACK1-215ENST00000507261 UNC13BO14795 1591 aa12.63□□□□□ -0.39
RACK1-215ENST00000507261 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
RACK1-215ENST00000507261 NUP155O75694 1391 aa12.62□□□□□ -0.39
RACK1-215ENST00000507261 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
RACK1-215ENST00000507261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
RACK1-215ENST00000507261 MROH1Q8NDA8 1641 aa12.61□□□□□ -0.39
RACK1-215ENST00000507261 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
RACK1-215ENST00000507261 PZPP20742 1482 aa12.6□□□□□ -0.39
RACK1-215ENST00000507261 PRDM15P57071 1507 aaPredicted RBP12.6□□□□□ -0.39
RACK1-215ENST00000507261 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
RACK1-215ENST00000507261 DHX57Q6P158 1386 aaKnown RBP12.59□□□□□ -0.39
RACK1-215ENST00000507261 GGT6Q6P531 493 aa12.59□□□□□ -0.39
RACK1-215ENST00000507261 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
RACK1-215ENST00000507261 FAM135AQ9P2D6 1515 aa12.58□□□□□ -0.4
RACK1-215ENST00000507261 IQGAP3Q86VI3 1631 aa12.58□□□□□ -0.4
RACK1-215ENST00000507261 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
RACK1-215ENST00000507261 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
RACK1-215ENST00000507261 KANK1Q14678 1352 aa12.56□□□□□ -0.4
RACK1-215ENST00000507261 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
RACK1-215ENST00000507261 MLECQ14165 292 aa12.55□□□□□ -0.4
RACK1-215ENST00000507261 LMTK2Q8IWU2 1503 aa12.55□□□□□ -0.4
RACK1-215ENST00000507261 ABCC3O15438 1527 aa12.54□□□□□ -0.4
RACK1-215ENST00000507261 PKD2Q13563 968 aa12.54□□□□□ -0.4
RACK1-215ENST00000507261 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
RACK1-215ENST00000507261 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
RACK1-215ENST00000507261 FOXD1Q16676 465 aa12.52□□□□□ -0.41
RACK1-215ENST00000507261 TET3O43151 1660 aa12.51□□□□□ -0.41
RACK1-215ENST00000507261 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
RACK1-215ENST00000507261 CEP152O94986 1710 aa12.51□□□□□ -0.41
RACK1-215ENST00000507261 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
RACK1-215ENST00000507261 EFCAB6Q5THR3 1501 aa12.5□□□□□ -0.41
RACK1-215ENST00000507261 E9PCH4 1651 aa12.49□□□□□ -0.41
RACK1-215ENST00000507261 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
RACK1-215ENST00000507261 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
RACK1-215ENST00000507261 NPATQ14207 1427 aa12.48□□□□□ -0.41
RACK1-215ENST00000507261 ARHGAP31Q2M1Z3 1444 aa12.48□□□□□ -0.41
RACK1-215ENST00000507261 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
RACK1-215ENST00000507261 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
RACK1-215ENST00000507261 PLA2R1Q13018 1463 aa12.47□□□□□ -0.41
RACK1-215ENST00000507261 CNTLNQ9NXG0 1405 aa12.47□□□□□ -0.41
RACK1-215ENST00000507261 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
RACK1-215ENST00000507261 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.41
RACK1-215ENST00000507261 PTPRTO14522 1441 aa12.46□□□□□ -0.41
RACK1-215ENST00000507261 ZMYM3Q14202 1370 aa12.46□□□□□ -0.41
RACK1-215ENST00000507261 ADAMTSL3P82987 1691 aa12.46□□□□□ -0.41
RACK1-215ENST00000507261 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
RACK1-215ENST00000507261 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
RACK1-215ENST00000507261 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
RACK1-215ENST00000507261 FBXO31Q5XUX0 539 aaPredicted RBP12.43□□□□□ -0.42
RACK1-215ENST00000507261 MADDQ8WXG6 1647 aa12.43□□□□□ -0.42
RACK1-215ENST00000507261 NOS1P29475 1434 aa12.43□□□□□ -0.42
RACK1-215ENST00000507261 TRPM2O94759 1503 aa12.42□□□□□ -0.42
RACK1-215ENST00000507261 SPHKAPQ2M3C7 1700 aa12.41□□□□□ -0.42
RACK1-215ENST00000507261 ERVK-7P63135 1459 aa12.4□□□□□ -0.42
RACK1-215ENST00000507261 SPATA31D1Q6ZQQ2 1576 aa12.4□□□□□ -0.42
RACK1-215ENST00000507261 CEBPAP49715 358 aaPredicted RBP12.4□□□□□ -0.42
RACK1-215ENST00000507261 NEUROD1Q13562 356 aa12.4□□□□□ -0.42
RACK1-215ENST00000507261 RIMS1Q86UR5 1692 aaKnown RBP12.4□□□□□ -0.42
RACK1-215ENST00000507261 PREX1Q8TCU6 1659 aa12.4□□□□□ -0.42
RACK1-215ENST00000507261 SYNMO15061 1565 aa12.39□□□□□ -0.43
RACK1-215ENST00000507261 C3P01024 1663 aa12.39□□□□□ -0.43
RACK1-215ENST00000507261 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
RACK1-215ENST00000507261 KDM4FA0A1W2PPD8 638 aa12.38□□□□□ -0.43
RACK1-215ENST00000507261 UGGT1Q9NYU2 1555 aa12.38□□□□□ -0.43
RACK1-215ENST00000507261 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
RACK1-215ENST00000507261 PTPRMP28827 1452 aa12.36□□□□□ -0.43
RACK1-215ENST00000507261 IDI1Q13907 227 aa12.36□□□□□ -0.43
RACK1-215ENST00000507261 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
RACK1-215ENST00000507261 PIK3C2BO00750 1634 aa12.36□□□□□ -0.43
RACK1-215ENST00000507261 TNRQ92752 1358 aa12.35□□□□□ -0.43
RACK1-215ENST00000507261 CFAP65Q6ZU64 1925 aaKnown RBP12.35□□□□□ -0.43
RACK1-215ENST00000507261 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
RACK1-215ENST00000507261 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
RACK1-215ENST00000507261 SPATA31E1Q6ZUB1 1445 aa12.34□□□□□ -0.43
RACK1-215ENST00000507261 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
RACK1-215ENST00000507261 NEURL4Q96JN8 1562 aa12.31□□□□□ -0.44
RACK1-215ENST00000507261 L3MBTL2Q969R5 705 aa12.31□□□□□ -0.44
RACK1-215ENST00000507261 ADGRB3O60242 1522 aa12.31□□□□□ -0.44
RACK1-215ENST00000507261 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
RACK1-215ENST00000507261 NLRP1Q9C000 1473 aa12.3□□□□□ -0.44
RACK1-215ENST00000507261 RGL3Q3MIN7 710 aa12.3□□□□□ -0.44
RACK1-215ENST00000507261 TMEM131LA2VDJ0 1609 aa12.29□□□□□ -0.44
RACK1-215ENST00000507261 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
RACK1-215ENST00000507261 KIF1BO60333 1816 aa12.28□□□□□ -0.44
RACK1-215ENST00000507261 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
RACK1-215ENST00000507261 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.44
RACK1-215ENST00000507261 PPP1R15AO75807 674 aaPredicted RBP12.27□□□□□ -0.45
RACK1-215ENST00000507261 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
RACK1-215ENST00000507261 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
RACK1-215ENST00000507261 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
RACK1-215ENST00000507261 ZNF326Q5BKZ1 582 aaKnown RBP12.25□□□□□ -0.45
RACK1-215ENST00000507261 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
RACK1-215ENST00000507261 UBR1Q8IWV7 1749 aa12.25□□□□□ -0.45
RACK1-215ENST00000507261 STAC3Q96MF2 364 aa12.24□□□□□ -0.45
RACK1-215ENST00000507261 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
RACK1-215ENST00000507261 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
RACK1-215ENST00000507261 NEXMIFQ5QGS0 1516 aa12.23□□□□□ -0.45
RACK1-215ENST00000507261 THEMISQ8N1K5 641 aaPredicted RBP12.23□□□□□ -0.45
RACK1-215ENST00000507261 MYO5BQ9ULV0 1848 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms