RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
ARHGEF28-207ENST00000506334 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
ARHGEF28-207ENST00000506334 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
ARHGEF28-207ENST00000506334 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
ARHGEF28-207ENST00000506334 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.35
ARHGEF28-207ENST00000506334 CASKIN1Q8WXD9 1431 aa12.83□□□□□ -0.36
ARHGEF28-207ENST00000506334 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
ARHGEF28-207ENST00000506334 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
ARHGEF28-207ENST00000506334 SAMD9LQ8IVG5 1584 aa12.82□□□□□ -0.36
ARHGEF28-207ENST00000506334 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
ARHGEF28-207ENST00000506334 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF28-207ENST00000506334 A2MP01023 1474 aa12.8□□□□□ -0.36
ARHGEF28-207ENST00000506334 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
ARHGEF28-207ENST00000506334 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
ARHGEF28-207ENST00000506334 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 CEP170BQ9Y4F5 1589 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
ARHGEF28-207ENST00000506334 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.36
ARHGEF28-207ENST00000506334 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.36
ARHGEF28-207ENST00000506334 CPS1P31327 1500 aa12.77□□□□□ -0.37
ARHGEF28-207ENST00000506334 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF28-207ENST00000506334 FBXO31Q5XUX0 539 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 SHANK2Q9UPX8 1470 aa12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
ARHGEF28-207ENST00000506334 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
ARHGEF28-207ENST00000506334 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
ARHGEF28-207ENST00000506334 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
ARHGEF28-207ENST00000506334 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
ARHGEF28-207ENST00000506334 MED1Q15648 1581 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF28-207ENST00000506334 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
ARHGEF28-207ENST00000506334 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
ARHGEF28-207ENST00000506334 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 TNRQ92752 1358 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 WASHC2CQ9Y4E1 1318 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 KIF3BO15066 747 aa12.72□□□□□ -0.37
ARHGEF28-207ENST00000506334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.71□□□□□ -0.37
ARHGEF28-207ENST00000506334 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
ARHGEF28-207ENST00000506334 FYCO1Q9BQS8 1478 aa12.71□□□□□ -0.38
ARHGEF28-207ENST00000506334 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF28-207ENST00000506334 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF28-207ENST00000506334 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
ARHGEF28-207ENST00000506334 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF28-207ENST00000506334 MED14O60244 1454 aa12.68□□□□□ -0.38
ARHGEF28-207ENST00000506334 ADGBQ8N7X0 1667 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 MBD5Q9P267 1494 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 ZBTB22O15209 634 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 NPHP4O75161 1426 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
ARHGEF28-207ENST00000506334 PZPP20742 1482 aa12.66□□□□□ -0.38
ARHGEF28-207ENST00000506334 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
ARHGEF28-207ENST00000506334 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
ARHGEF28-207ENST00000506334 VWDEQ8N2E2 1590 aa12.65□□□□□ -0.38
ARHGEF28-207ENST00000506334 RGS17Q9UGC6 210 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF28-207ENST00000506334 FAM135AQ9P2D6 1515 aa12.64□□□□□ -0.39
ARHGEF28-207ENST00000506334 POLR1AO95602 1720 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF28-207ENST00000506334 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
ARHGEF28-207ENST00000506334 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
ARHGEF28-207ENST00000506334 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
ARHGEF28-207ENST00000506334 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
ARHGEF28-207ENST00000506334 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
ARHGEF28-207ENST00000506334 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
ARHGEF28-207ENST00000506334 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
ARHGEF28-207ENST00000506334 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
ARHGEF28-207ENST00000506334 TXNDC2Q86VQ3 553 aa12.57□□□□□ -0.4
ARHGEF28-207ENST00000506334 CCDC141Q6ZP82 1450 aa12.57□□□□□ -0.4
ARHGEF28-207ENST00000506334 LTKP29376 864 aa12.56□□□□□ -0.4
ARHGEF28-207ENST00000506334 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
ARHGEF28-207ENST00000506334 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
ARHGEF28-207ENST00000506334 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
ARHGEF28-207ENST00000506334 IQGAP1P46940 1657 aa12.55□□□□□ -0.4
ARHGEF28-207ENST00000506334 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
ARHGEF28-207ENST00000506334 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
ARHGEF28-207ENST00000506334 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.4
ARHGEF28-207ENST00000506334 RNF17Q9BXT8 1623 aaKnown RBP12.52□□□□□ -0.4
ARHGEF28-207ENST00000506334 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF28-207ENST00000506334 CAMSAP2Q08AD1 1489 aa12.51□□□□□ -0.41
ARHGEF28-207ENST00000506334 SCAF11Q99590 1463 aaKnown RBP12.51□□□□□ -0.41
ARHGEF28-207ENST00000506334 SYNMO15061 1565 aa12.51□□□□□ -0.41
ARHGEF28-207ENST00000506334 KCNA6P17658 529 aa12.5□□□□□ -0.41
ARHGEF28-207ENST00000506334 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
ARHGEF28-207ENST00000506334 ABCC3O15438 1527 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 ARHGAP23Q9P227 1491 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 PROSER2Q86WR7 435 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
ARHGEF28-207ENST00000506334 ARHGEF5Q12774 1597 aa12.47□□□□□ -0.41
ARHGEF28-207ENST00000506334 ZC3H13Q5T200 1668 aaKnown RBP12.47□□□□□ -0.41
ARHGEF28-207ENST00000506334 SLIT1O75093 1534 aa12.47□□□□□ -0.41
ARHGEF28-207ENST00000506334 TMEM94Q12767 1356 aa12.46□□□□□ -0.41
ARHGEF28-207ENST00000506334 ARHGAP31Q2M1Z3 1444 aa12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 SLAIN2Q9P270 581 aa12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms