RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LMTK3Q96Q04 1460 aa27.39■■□□□ 1.97
SMN1-204ENST00000506163 ADGRL2O95490 1459 aa27.38■■□□□ 1.97
SMN1-204ENST00000506163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.37■■□□□ 1.97
SMN1-204ENST00000506163 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
SMN1-204ENST00000506163 RRBP1Q9P2E9 1410 aaKnown RBP27.35■■□□□ 1.97
SMN1-204ENST00000506163 RNF17Q9BXT8 1623 aaKnown RBP27.35■■□□□ 1.97
SMN1-204ENST00000506163 EIF2AK4Q9P2K8 1649 aaKnown RBP27.34■■□□□ 1.97
SMN1-204ENST00000506163 MROH1Q8NDA8 1641 aa27.34■■□□□ 1.97
SMN1-204ENST00000506163 ITGAEP38570 1179 aa27.33■■□□□ 1.97
SMN1-204ENST00000506163 ERBINQ96RT1 1412 aa27.33■■□□□ 1.97
SMN1-204ENST00000506163 WASHC2CQ9Y4E1 1318 aa27.33■■□□□ 1.97
SMN1-204ENST00000506163 SETD1BQ9UPS6 1966 aaKnown RBP27.33■■□□□ 1.97
SMN1-204ENST00000506163 HSPA2P54652 639 aa27.32■■□□□ 1.96
SMN1-204ENST00000506163 KDM5DQ9BY66 1539 aa27.3■■□□□ 1.96
SMN1-204ENST00000506163 FBXO31Q5XUX0 539 aaPredicted RBP27.27■■□□□ 1.96
SMN1-204ENST00000506163 ABCC3O15438 1527 aa27.26■■□□□ 1.95
SMN1-204ENST00000506163 NPATQ14207 1427 aa27.26■■□□□ 1.95
SMN1-204ENST00000506163 FAM135AQ9P2D6 1515 aa27.25■■□□□ 1.95
SMN1-204ENST00000506163 ROCK1Q13464 1354 aa27.25■■□□□ 1.95
SMN1-204ENST00000506163 PREX1Q8TCU6 1659 aa27.24■■□□□ 1.95
SMN1-204ENST00000506163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.24■■□□□ 1.95
SMN1-204ENST00000506163 ANKRD50Q9ULJ7 1429 aa27.23■■□□□ 1.95
SMN1-204ENST00000506163 UHRF1BP1Q6BDS2 1440 aa27.21■■□□□ 1.95
SMN1-204ENST00000506163 DEPDC5O75140 1603 aa27.21■■□□□ 1.95
SMN1-204ENST00000506163 PRDM15P57071 1507 aaPredicted RBP27.21■■□□□ 1.95
SMN1-204ENST00000506163 PZPP20742 1482 aa27.2■■□□□ 1.94
SMN1-204ENST00000506163 CEP152O94986 1710 aa27.18■■□□□ 1.94
SMN1-204ENST00000506163 ZC3H13Q5T200 1668 aaKnown RBP27.15■■□□□ 1.94
SMN1-204ENST00000506163 VWDEQ8N2E2 1590 aa27.15■■□□□ 1.94
SMN1-204ENST00000506163 TNRQ92752 1358 aa27.11■■□□□ 1.93
SMN1-204ENST00000506163 CAMSAP1Q5T5Y3 1602 aa27.11■■□□□ 1.93
SMN1-204ENST00000506163 MYO3AQ8NEV4 1616 aa27.1■■□□□ 1.93
SMN1-204ENST00000506163 KANK1Q14678 1352 aa27.1■■□□□ 1.93
SMN1-204ENST00000506163 CFAP65Q6ZU64 1925 aaKnown RBP27.09■■□□□ 1.93
SMN1-204ENST00000506163 ARHGAP31Q2M1Z3 1444 aa27.08■■□□□ 1.93
SMN1-204ENST00000506163 LMTK2Q8IWU2 1503 aa27.08■■□□□ 1.93
SMN1-204ENST00000506163 ERVK-7P63135 1459 aa27.06■■□□□ 1.92
SMN1-204ENST00000506163 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
SMN1-204ENST00000506163 NAIPQ13075 1403 aa27.05■■□□□ 1.92
SMN1-204ENST00000506163 CEP170BQ9Y4F5 1589 aaPredicted RBP27.05■■□□□ 1.92
SMN1-204ENST00000506163 STRCQ7RTU9 1775 aa27.04■■□□□ 1.92
SMN1-204ENST00000506163 UNC13BO14795 1591 aa27.04■■□□□ 1.92
SMN1-204ENST00000506163 ZNF142P52746 1687 aaPredicted RBP27.03■■□□□ 1.92
SMN1-204ENST00000506163 A2ML1A8K2U0 1454 aa27.03■■□□□ 1.92
SMN1-204ENST00000506163 EFCAB6Q5THR3 1501 aa26.98■■□□□ 1.91
SMN1-204ENST00000506163 HFM1A2PYH4 1435 aa26.98■■□□□ 1.91
SMN1-204ENST00000506163 NUP155O75694 1391 aa26.97■■□□□ 1.91
SMN1-204ENST00000506163 NLRP1Q9C000 1473 aa26.97■■□□□ 1.91
SMN1-204ENST00000506163 NCKAP5LQ9HCH0 1330 aa26.95■■□□□ 1.9
SMN1-204ENST00000506163 GCC2Q8IWJ2 1684 aa26.94■■□□□ 1.9
SMN1-204ENST00000506163 NOS1P29475 1434 aa26.93■■□□□ 1.9
SMN1-204ENST00000506163 IQGAP3Q86VI3 1631 aa26.93■■□□□ 1.9
SMN1-204ENST00000506163 TET3O43151 1660 aa26.93■■□□□ 1.9
SMN1-204ENST00000506163 PLA2R1Q13018 1463 aa26.91■■□□□ 1.9
SMN1-204ENST00000506163 SYNMO15061 1565 aa26.89■■□□□ 1.9
SMN1-204ENST00000506163 UGGT1Q9NYU2 1555 aa26.89■■□□□ 1.9
SMN1-204ENST00000506163 IDI1Q13907 227 aa26.89■■□□□ 1.89
SMN1-204ENST00000506163 THEMISQ8N1K5 641 aaPredicted RBP26.88■■□□□ 1.89
SMN1-204ENST00000506163 RPRD2Q5VT52 1461 aaKnown RBP26.88■■□□□ 1.89
SMN1-204ENST00000506163 DMRT2Q9Y5R5 561 aa26.87■■□□□ 1.89
SMN1-204ENST00000506163 E9PCH4 1651 aa26.87■■□□□ 1.89
SMN1-204ENST00000506163 PKD2Q13563 968 aa26.85■■□□□ 1.89
SMN1-204ENST00000506163 PTPRTO14522 1441 aa26.85■■□□□ 1.89
SMN1-204ENST00000506163 UBR1Q8IWV7 1749 aa26.82■■□□□ 1.88
SMN1-204ENST00000506163 PIK3C2BO00750 1634 aa26.82■■□□□ 1.88
SMN1-204ENST00000506163 TRIM52Q96A61 297 aa26.8■■□□□ 1.88
SMN1-204ENST00000506163 SLC52A1Q9NWF4 448 aa26.79■■□□□ 1.88
SMN1-204ENST00000506163 ANKLE2Q86XL3 938 aa26.78■■□□□ 1.88
SMN1-204ENST00000506163 NEURL4Q96JN8 1562 aa26.78■■□□□ 1.88
SMN1-204ENST00000506163 LTKP29376 864 aa26.75■■□□□ 1.87
SMN1-204ENST00000506163 ARHGAP23Q9P227 1491 aa26.74■■□□□ 1.87
SMN1-204ENST00000506163 SETD5Q9C0A6 1442 aa26.73■■□□□ 1.87
SMN1-204ENST00000506163 STAG3Q9UJ98 1225 aa26.73■■□□□ 1.87
SMN1-204ENST00000506163 POLR1AO95602 1720 aaPredicted RBP26.72■■□□□ 1.87
SMN1-204ENST00000506163 SLIT1O75093 1534 aa26.72■■□□□ 1.87
SMN1-204ENST00000506163 TMEM2Q9UHN6 1383 aa26.71■■□□□ 1.87
SMN1-204ENST00000506163 SLC4A1APQ9BWU0 796 aaKnown RBP26.7■■□□□ 1.86
SMN1-204ENST00000506163 MED14O60244 1454 aa26.7■■□□□ 1.86
SMN1-204ENST00000506163 KDM5AP29375 1690 aaKnown RBP26.69■■□□□ 1.86
SMN1-204ENST00000506163 ADGRB3O60242 1522 aa26.69■■□□□ 1.86
SMN1-204ENST00000506163 TXNDC2Q86VQ3 553 aa26.69■■□□□ 1.86
SMN1-204ENST00000506163 NPHP4O75161 1426 aaPredicted RBP26.67■■□□□ 1.86
SMN1-204ENST00000506163 ZNF335Q9H4Z2 1342 aaPredicted RBP26.67■■□□□ 1.86
SMN1-204ENST00000506163 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
SMN1-204ENST00000506163 RAB3GAP2Q9H2M9 1393 aa26.66■■□□□ 1.86
SMN1-204ENST00000506163 TMEM131LA2VDJ0 1609 aa26.66■■□□□ 1.86
SMN1-204ENST00000506163 FOXD1Q16676 465 aa26.65■■□□□ 1.86
SMN1-204ENST00000506163 MYO5BQ9ULV0 1848 aa26.65■■□□□ 1.86
SMN1-204ENST00000506163 LTBP4Q8N2S1 1624 aa26.65■■□□□ 1.86
SMN1-204ENST00000506163 SPHKAPQ2M3C7 1700 aa26.64■■□□□ 1.86
SMN1-204ENST00000506163 CERKQ8TCT0 537 aa26.64■■□□□ 1.85
SMN1-204ENST00000506163 MPHOSPH9Q99550 1183 aa26.64■■□□□ 1.85
SMN1-204ENST00000506163 CHGAP10645 457 aaKnown RBP26.63■■□□□ 1.85
SMN1-204ENST00000506163 EID1Q9Y6B2 187 aa26.62■■□□□ 1.85
SMN1-204ENST00000506163 IQGAP1P46940 1657 aa26.6■■□□□ 1.85
SMN1-204ENST00000506163 ZFYVE9O95405 1425 aa26.59■■□□□ 1.85
SMN1-204ENST00000506163 TRPM2O94759 1503 aa26.58■■□□□ 1.85
SMN1-204ENST00000506163 CLTCL1P53675 1640 aa26.57■■□□□ 1.84
SMN1-204ENST00000506163 RIMS2Q9UQ26 1411 aa26.56■■□□□ 1.84
SMN1-204ENST00000506163 NUTM2DQ5VT03 806 aaPredicted RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms