RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 DNMT1P26358 1616 aaKnown RBP13.14□□□□□ -0.31
SNF8-204ENST00000506104 TNRQ92752 1358 aa13.14□□□□□ -0.31
SNF8-204ENST00000506104 A2ML1A8K2U0 1454 aa13.14□□□□□ -0.31
SNF8-204ENST00000506104 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
SNF8-204ENST00000506104 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
SNF8-204ENST00000506104 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
SNF8-204ENST00000506104 DHX29Q7Z478 1369 aaKnown RBP13.13□□□□□ -0.31
SNF8-204ENST00000506104 CCDC141Q6ZP82 1450 aa13.12□□□□□ -0.31
SNF8-204ENST00000506104 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
SNF8-204ENST00000506104 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
SNF8-204ENST00000506104 TCOF1Q13428 1488 aaKnown RBP13.11□□□□□ -0.31
SNF8-204ENST00000506104 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
SNF8-204ENST00000506104 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
SNF8-204ENST00000506104 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
SNF8-204ENST00000506104 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
SNF8-204ENST00000506104 RTEL1-TNFRSF6BF6WH68 1400 aa13.1□□□□□ -0.31
SNF8-204ENST00000506104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNF8-204ENST00000506104 TOM1O60784 492 aa13.09□□□□□ -0.31
SNF8-204ENST00000506104 HSPA1LP34931 641 aa13.08□□□□□ -0.32
SNF8-204ENST00000506104 THEMISQ8N1K5 641 aaPredicted RBP13.07□□□□□ -0.32
SNF8-204ENST00000506104 PZPP20742 1482 aa13.07□□□□□ -0.32
SNF8-204ENST00000506104 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
SNF8-204ENST00000506104 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
SNF8-204ENST00000506104 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
SNF8-204ENST00000506104 FAM135AQ9P2D6 1515 aa13.05□□□□□ -0.32
SNF8-204ENST00000506104 NEURL4Q96JN8 1562 aa13.05□□□□□ -0.32
SNF8-204ENST00000506104 CEP152O94986 1710 aa13.05□□□□□ -0.32
SNF8-204ENST00000506104 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
SNF8-204ENST00000506104 CPS1P31327 1500 aa13.04□□□□□ -0.32
SNF8-204ENST00000506104 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
SNF8-204ENST00000506104 IQGAP1P46940 1657 aa13.03□□□□□ -0.32
SNF8-204ENST00000506104 LOC105371045A0A1W2PR82 267 aa13.03□□□□□ -0.32
SNF8-204ENST00000506104 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
SNF8-204ENST00000506104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.333e-7■■□□□ 14.5
SNF8-204ENST00000506104 NLRP1Q9C000 1473 aa13.02□□□□□ -0.33
SNF8-204ENST00000506104 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
SNF8-204ENST00000506104 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
SNF8-204ENST00000506104 VWDEQ8N2E2 1590 aa12.99□□□□□ -0.33
SNF8-204ENST00000506104 LRRC9Q6ZRR7 1453 aa12.99□□□□□ -0.33
SNF8-204ENST00000506104 APLP2Q06481 763 aa12.99□□□□□ -0.33
SNF8-204ENST00000506104 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
SNF8-204ENST00000506104 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
SNF8-204ENST00000506104 ABCC3O15438 1527 aa12.98□□□□□ -0.33
SNF8-204ENST00000506104 DEPDC5O75140 1603 aa12.98□□□□□ -0.33
SNF8-204ENST00000506104 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
SNF8-204ENST00000506104 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
SNF8-204ENST00000506104 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
SNF8-204ENST00000506104 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
SNF8-204ENST00000506104 EIF2AK4Q9P2K8 1649 aaKnown RBP12.96□□□□□ -0.33
SNF8-204ENST00000506104 ERVK-7P63135 1459 aa12.96□□□□□ -0.34
SNF8-204ENST00000506104 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
SNF8-204ENST00000506104 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
SNF8-204ENST00000506104 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
SNF8-204ENST00000506104 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
SNF8-204ENST00000506104 BCANQ96GW7 911 aa12.94□□□□□ -0.34
SNF8-204ENST00000506104 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
SNF8-204ENST00000506104 EID1Q9Y6B2 187 aa12.94□□□□□ -0.34
SNF8-204ENST00000506104 MED14O60244 1454 aa12.93□□□□□ -0.34
SNF8-204ENST00000506104 DUOX2Q9NRD8 1548 aa12.93□□□□□ -0.34
SNF8-204ENST00000506104 CROCC2H7BZ55 1655 aa12.92□□□□□ -0.34
SNF8-204ENST00000506104 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
SNF8-204ENST00000506104 KIF15Q9NS87 1388 aa12.92□□□□□ -0.34
SNF8-204ENST00000506104 MROH1Q8NDA8 1641 aa12.91□□□□□ -0.34
SNF8-204ENST00000506104 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
SNF8-204ENST00000506104 SYNMO15061 1565 aa12.91□□□□□ -0.34
SNF8-204ENST00000506104 KANK1Q14678 1352 aa12.91□□□□□ -0.34
SNF8-204ENST00000506104 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
SNF8-204ENST00000506104 LTKP29376 864 aa12.9□□□□□ -0.34
SNF8-204ENST00000506104 PIK3C2BO00750 1634 aa12.9□□□□□ -0.34
SNF8-204ENST00000506104 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
SNF8-204ENST00000506104 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
SNF8-204ENST00000506104 XIRP1Q702N8 1843 aaKnown RBP12.87□□□□□ -0.35
SNF8-204ENST00000506104 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
SNF8-204ENST00000506104 SLC26A8Q96RN1 970 aa12.86□□□□□ -0.35
SNF8-204ENST00000506104 ABCC5O15440 1437 aa12.86□□□□□ -0.35
SNF8-204ENST00000506104 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
SNF8-204ENST00000506104 MAP3K1Q13233 1512 aa12.85□□□□□ -0.35
SNF8-204ENST00000506104 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
SNF8-204ENST00000506104 DAPK1P53355 1430 aa12.85□□□□□ -0.35
SNF8-204ENST00000506104 ERBINQ96RT1 1412 aa12.85□□□□□ -0.35
SNF8-204ENST00000506104 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.36
SNF8-204ENST00000506104 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
SNF8-204ENST00000506104 SLIT1O75093 1534 aa12.83□□□□□ -0.36
SNF8-204ENST00000506104 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
SNF8-204ENST00000506104 TMEM2Q9UHN6 1383 aa12.82□□□□□ -0.36
SNF8-204ENST00000506104 PPP1R15AO75807 674 aaPredicted RBP12.82□□□□□ -0.36
SNF8-204ENST00000506104 IDI1Q13907 227 aa12.82□□□□□ -0.36
SNF8-204ENST00000506104 MYO5BQ9ULV0 1848 aa12.82□□□□□ -0.36
SNF8-204ENST00000506104 ARHGAP23Q9P227 1491 aa12.82□□□□□ -0.36
SNF8-204ENST00000506104 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
SNF8-204ENST00000506104 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
SNF8-204ENST00000506104 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
SNF8-204ENST00000506104 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
SNF8-204ENST00000506104 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
SNF8-204ENST00000506104 KCNA6P17658 529 aa12.78□□□□□ -0.36
SNF8-204ENST00000506104 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.36
SNF8-204ENST00000506104 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
SNF8-204ENST00000506104 ADGRB3O60242 1522 aa12.77□□□□□ -0.37
SNF8-204ENST00000506104 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
SNF8-204ENST00000506104 MSH6P52701 1360 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms