RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF772Q68DY9 489 aaPredicted RBP6.09□□□□□ -1.43
TCOF1-208ENST00000506063 ZRANB1Q9UGI0 708 aa6.09□□□□□ -1.43
TCOF1-208ENST00000506063 SAMD9LQ8IVG5 1584 aa6.09□□□□□ -1.43
TCOF1-208ENST00000506063 PREX2Q70Z35 1606 aa6.08□□□□□ -1.44
TCOF1-208ENST00000506063 RXRBP28702 533 aa6.08□□□□□ -1.44
TCOF1-208ENST00000506063 ANKLE2Q86XL3 938 aa6.08□□□□□ -1.44
TCOF1-208ENST00000506063 ATP7AQ04656 1500 aa6.08□□□□□ -1.44
TCOF1-208ENST00000506063 KDM5DQ9BY66 1539 aa6.08□□□□□ -1.44
TCOF1-208ENST00000506063 UGGT1Q9NYU2 1555 aa6.07□□□□□ -1.44
TCOF1-208ENST00000506063 INO80Q9ULG1 1556 aaPredicted RBP6.07□□□□□ -1.44
TCOF1-208ENST00000506063 NHSL1Q5SYE7 1610 aa6.07□□□□□ -1.44
TCOF1-208ENST00000506063 TNRQ92752 1358 aa6.06□□□□□ -1.44
TCOF1-208ENST00000506063 DIP2AQ14689 1571 aa6.06□□□□□ -1.44
TCOF1-208ENST00000506063 PZPP20742 1482 aa6.06□□□□□ -1.44
TCOF1-208ENST00000506063 FGD6Q6ZV73 1430 aa6.06□□□□□ -1.44
TCOF1-208ENST00000506063 CDC42BPAQ5VT25 1732 aa6.05□□□□□ -1.44
TCOF1-208ENST00000506063 LRRIQ1Q96JM4 1722 aa6.05□□□□□ -1.44
TCOF1-208ENST00000506063 SPATA31A6Q5VVP1 1343 aa6.05□□□□□ -1.44
TCOF1-208ENST00000506063 LRRC9Q6ZRR7 1453 aa6.05□□□□□ -1.44
TCOF1-208ENST00000506063 NLRP1Q9C000 1473 aa6.05□□□□□ -1.44
TCOF1-208ENST00000506063 CEP350Q5VT06 3117 aa6.05□□□□□ -1.44
TCOF1-208ENST00000506063 FBXO31Q5XUX0 539 aaPredicted RBP6.05□□□□□ -1.44
TCOF1-208ENST00000506063 TIAM1Q13009 1591 aa6.05□□□□□ -1.44
TCOF1-208ENST00000506063 BCL9LQ86UU0 1499 aa6.04□□□□□ -1.44
TCOF1-208ENST00000506063 AHDC1Q5TGY3 1603 aaPredicted RBP6.04□□□□□ -1.44
TCOF1-208ENST00000506063 UBR1Q8IWV7 1749 aa6.04□□□□□ -1.44
TCOF1-208ENST00000506063 TMEM94Q12767 1356 aa6.04□□□□□ -1.44
TCOF1-208ENST00000506063 FAM135AQ9P2D6 1515 aa6.04□□□□□ -1.44
TCOF1-208ENST00000506063 A2MP01023 1474 aa6.03□□□□□ -1.44
TCOF1-208ENST00000506063 MYT1LQ9UL68 1186 aa6.03□□□□□ -1.44
TCOF1-208ENST00000506063 ADGBQ8N7X0 1667 aa6.03□□□□□ -1.44
TCOF1-208ENST00000506063 ATAD2Q6PL18 1390 aa6.03□□□□□ -1.44
TCOF1-208ENST00000506063 NWD1Q149M9 1564 aa6.02□□□□□ -1.45
TCOF1-208ENST00000506063 MIA2Q96PC5 1412 aa6.02□□□□□ -1.45
TCOF1-208ENST00000506063 FAM9AQ8IZU1 332 aaPredicted RBP6.02□□□□□ -1.45
TCOF1-208ENST00000506063 THEMISQ8N1K5 641 aaPredicted RBP6.02□□□□□ -1.45
TCOF1-208ENST00000506063 ARHGAP23Q9P227 1491 aa6.02□□□□□ -1.45
TCOF1-208ENST00000506063 AFF2P51816 1311 aa6.01□□□□□ -1.45
TCOF1-208ENST00000506063 KDM5AP29375 1690 aaKnown RBP6.01□□□□□ -1.45
TCOF1-208ENST00000506063 TROQ12816 1431 aaPredicted RBP6.01□□□□□ -1.45
TCOF1-208ENST00000506063 SYCP2Q9BX26 1530 aa6.01□□□□□ -1.45
TCOF1-208ENST00000506063 SUPT5HO00267 1087 aaKnown RBP6.01□□□□□ -1.45
TCOF1-208ENST00000506063 NCOA2Q15596 1464 aa6.01□□□□□ -1.45
TCOF1-208ENST00000506063 SCAF11Q99590 1463 aaKnown RBP6.01□□□□□ -1.45
TCOF1-208ENST00000506063 SLIT1O75093 1534 aa6□□□□□ -1.45
TCOF1-208ENST00000506063 PRDM15P57071 1507 aaPredicted RBP6□□□□□ -1.45
TCOF1-208ENST00000506063 NUTM2BA6NNL0 878 aaPredicted RBP6□□□□□ -1.45
TCOF1-208ENST00000506063 NUTM2EB1AL46 878 aaPredicted RBP6□□□□□ -1.45
TCOF1-208ENST00000506063 YY1P25490 414 aa6□□□□□ -1.45
TCOF1-208ENST00000506063 RBM6P78332 1123 aaKnown RBP6□□□□□ -1.45
TCOF1-208ENST00000506063 NUTM2DQ5VT03 806 aaPredicted RBP6□□□□□ -1.45
TCOF1-208ENST00000506063 GGT6Q6P531 493 aa6□□□□□ -1.45
TCOF1-208ENST00000506063 NUTM2AQ8IVF1 878 aaPredicted RBP6□□□□□ -1.45
TCOF1-208ENST00000506063 UTRNP46939 3433 aa6□□□□□ -1.45
TCOF1-208ENST00000506063 MAST1Q9Y2H9 1570 aa5.99□□□□□ -1.45
TCOF1-208ENST00000506063 LTKP29376 864 aa5.99□□□□□ -1.45
TCOF1-208ENST00000506063 MEX3CQ5U5Q3 659 aaKnown RBP5.99□□□□□ -1.45
TCOF1-208ENST00000506063 CFAP65Q6ZU64 1925 aaKnown RBP5.99□□□□□ -1.45
TCOF1-208ENST00000506063 ABCC3O15438 1527 aa5.99□□□□□ -1.45
TCOF1-208ENST00000506063 TET3O43151 1660 aa5.98□□□□□ -1.45
TCOF1-208ENST00000506063 SLAIN2Q9P270 581 aa5.98□□□□□ -1.45
TCOF1-208ENST00000506063 NKTRP30414 1462 aaKnown RBP5.97□□□□□ -1.45
TCOF1-208ENST00000506063 FOXD1Q16676 465 aa5.97□□□□□ -1.45
TCOF1-208ENST00000506063 QTRT2Q9H974 415 aaKnown RBP5.97□□□□□ -1.45
TCOF1-208ENST00000506063 BRWD3Q6RI45 1802 aa5.97□□□□□ -1.45
TCOF1-208ENST00000506063 SPAG9O60271 1321 aaKnown RBP5.97□□□□□ -1.45
TCOF1-208ENST00000506063 HRCP23327 699 aa5.96□□□□□ -1.46
TCOF1-208ENST00000506063 CCDC125Q86Z20 511 aa5.96□□□□□ -1.46
TCOF1-208ENST00000506063 CHD2O14647 1828 aaKnown RBP5.96□□□□□ -1.46
TCOF1-208ENST00000506063 CAMSAP2Q08AD1 1489 aa5.96□□□□□ -1.46
TCOF1-208ENST00000506063 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.95□□□□□ -1.46
TCOF1-208ENST00000506063 ERVK-7P63135 1459 aa5.95□□□□□ -1.46
TCOF1-208ENST00000506063 GPATCH8Q9UKJ3 1502 aaKnown RBP5.94□□□□□ -1.46
TCOF1-208ENST00000506063 BLMP54132 1417 aaPredicted RBP5.94□□□□□ -1.46
TCOF1-208ENST00000506063 SETD5Q9C0A6 1442 aa5.94□□□□□ -1.46
TCOF1-208ENST00000506063 SENP3-EIF4A1A0A087X0R7 540 aa5.94□□□□□ -1.46
TCOF1-208ENST00000506063 KCNA6P17658 529 aa5.94□□□□□ -1.46
TCOF1-208ENST00000506063 DEFB132Q7Z7B7 95 aa5.94□□□□□ -1.46
TCOF1-208ENST00000506063 MSH6P52701 1360 aa5.93□□□□□ -1.46
TCOF1-208ENST00000506063 ATRNO75882 1429 aa5.93□□□□□ -1.46
TCOF1-208ENST00000506063 KIAA1107Q9UPP5 1409 aa5.93□□□□□ -1.46
TCOF1-208ENST00000506063 CAMTA1Q9Y6Y1 1673 aa5.93□□□□□ -1.46
TCOF1-208ENST00000506063 SPHKAPQ2M3C7 1700 aa5.93□□□□□ -1.46
TCOF1-208ENST00000506063 DHX29Q7Z478 1369 aaKnown RBP5.93□□□□□ -1.46
TCOF1-208ENST00000506063 CLIP1P30622 1438 aa5.92□□□□□ -1.46
TCOF1-208ENST00000506063 PSDA5PKW4 1024 aaPredicted RBP5.92□□□□□ -1.46
TCOF1-208ENST00000506063 HNRNPMP52272 730 aaKnown RBP eCLIP5.92□□□□□ -1.46
TCOF1-208ENST00000506063 PROSER2Q86WR7 435 aaPredicted RBP5.92□□□□□ -1.46
TCOF1-208ENST00000506063 UNC13BO14795 1591 aa5.92□□□□□ -1.46
TCOF1-208ENST00000506063 PIK3C2BO00750 1634 aa5.92□□□□□ -1.46
TCOF1-208ENST00000506063 MROH1Q8NDA8 1641 aa5.92□□□□□ -1.46
TCOF1-208ENST00000506063 TXNDC2Q86VQ3 553 aa5.91□□□□□ -1.46
TCOF1-208ENST00000506063 NGLY1Q96IV0 654 aa5.91□□□□□ -1.46
TCOF1-208ENST00000506063 C8orf37Q96NL8 207 aa5.91□□□□□ -1.46
TCOF1-208ENST00000506063 CHD4Q14839 1912 aa5.91□□□□□ -1.46
TCOF1-208ENST00000506063 PNPLA6Q8IY17 1366 aa5.91□□□□□ -1.46
TCOF1-208ENST00000506063 CEP152O94986 1710 aa5.91□□□□□ -1.46
TCOF1-208ENST00000506063 MBD5Q9P267 1494 aa5.9□□□□□ -1.46
TCOF1-208ENST00000506063 ASXL1Q8IXJ9 1541 aa5.9□□□□□ -1.46
TCOF1-208ENST00000506063 C1QTNF8P60827 252 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms