RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 MED1Q15648 1581 aaPredicted RBP18.8■□□□□ 0.6
CCHCR1-219ENST00000505392 DHX29Q7Z478 1369 aaKnown RBP18.8■□□□□ 0.6
CCHCR1-219ENST00000505392 TNRQ92752 1358 aa18.8■□□□□ 0.6
CCHCR1-219ENST00000505392 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
CCHCR1-219ENST00000505392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCHCR1-219ENST00000505392 CPS1P31327 1500 aa18.79■□□□□ 0.6
CCHCR1-219ENST00000505392 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
CCHCR1-219ENST00000505392 WASHC2CQ9Y4E1 1318 aa18.77■□□□□ 0.6
CCHCR1-219ENST00000505392 MTUS2Q5JR59 1369 aa18.77■□□□□ 0.6
CCHCR1-219ENST00000505392 MBD5Q9P267 1494 aa18.74■□□□□ 0.59
CCHCR1-219ENST00000505392 RTEL1-TNFRSF6BF6WH68 1400 aa18.74■□□□□ 0.59
CCHCR1-219ENST00000505392 MIA2Q96PC5 1412 aa18.72■□□□□ 0.59
CCHCR1-219ENST00000505392 NEURL4Q96JN8 1562 aa18.72■□□□□ 0.59
CCHCR1-219ENST00000505392 ADGBQ8N7X0 1667 aa18.7■□□□□ 0.58
CCHCR1-219ENST00000505392 NPHP4O75161 1426 aaPredicted RBP18.7■□□□□ 0.58
CCHCR1-219ENST00000505392 PZPP20742 1482 aa18.7■□□□□ 0.58
CCHCR1-219ENST00000505392 RSPH4AQ5TD94 716 aa18.68■□□□□ 0.58
CCHCR1-219ENST00000505392 VWDEQ8N2E2 1590 aa18.67■□□□□ 0.58
CCHCR1-219ENST00000505392 MED14O60244 1454 aa18.66■□□□□ 0.58
CCHCR1-219ENST00000505392 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
CCHCR1-219ENST00000505392 UGGT1Q9NYU2 1555 aa18.66■□□□□ 0.58
CCHCR1-219ENST00000505392 POLR1AO95602 1720 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-219ENST00000505392 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
CCHCR1-219ENST00000505392 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.58
CCHCR1-219ENST00000505392 ALKQ9UM73 1620 aa18.64■□□□□ 0.57
CCHCR1-219ENST00000505392 TSPY4P0CV99 314 aa18.64■□□□□ 0.57
CCHCR1-219ENST00000505392 TSPY10P0CW01 314 aa18.64■□□□□ 0.57
CCHCR1-219ENST00000505392 RGS17Q9UGC6 210 aaPredicted RBP18.64■□□□□ 0.57
CCHCR1-219ENST00000505392 TIAM1Q13009 1591 aa18.62■□□□□ 0.57
CCHCR1-219ENST00000505392 LRRC7Q96NW7 1537 aa18.61■□□□□ 0.57
CCHCR1-219ENST00000505392 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
CCHCR1-219ENST00000505392 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
CCHCR1-219ENST00000505392 DEPDC5O75140 1603 aa18.58■□□□□ 0.56
CCHCR1-219ENST00000505392 TXNDC2Q86VQ3 553 aa18.56■□□□□ 0.56
CCHCR1-219ENST00000505392 EHBP1L1Q8N3D4 1523 aa18.55■□□□□ 0.56
CCHCR1-219ENST00000505392 LTKP29376 864 aa18.55■□□□□ 0.56
CCHCR1-219ENST00000505392 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
CCHCR1-219ENST00000505392 CAMSAP2Q08AD1 1489 aa18.53■□□□□ 0.56
CCHCR1-219ENST00000505392 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
CCHCR1-219ENST00000505392 NCOA2Q15596 1464 aa18.52■□□□□ 0.55
CCHCR1-219ENST00000505392 POTEAQ6S8J7 498 aa18.51■□□□□ 0.55
CCHCR1-219ENST00000505392 EID1Q9Y6B2 187 aa18.5■□□□□ 0.55
CCHCR1-219ENST00000505392 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-219ENST00000505392 ERVK-7P63135 1459 aa18.48■□□□□ 0.55
CCHCR1-219ENST00000505392 SCAF11Q99590 1463 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-219ENST00000505392 ABCC3O15438 1527 aa18.47■□□□□ 0.55
CCHCR1-219ENST00000505392 FAM135BQ49AJ0 1406 aa18.46■□□□□ 0.55
CCHCR1-219ENST00000505392 SYNMO15061 1565 aa18.45■□□□□ 0.54
CCHCR1-219ENST00000505392 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
CCHCR1-219ENST00000505392 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
CCHCR1-219ENST00000505392 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-219ENST00000505392 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
CCHCR1-219ENST00000505392 ZC3H13Q5T200 1668 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-219ENST00000505392 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
CCHCR1-219ENST00000505392 KCNA6P17658 529 aa18.41■□□□□ 0.54
CCHCR1-219ENST00000505392 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
CCHCR1-219ENST00000505392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCHCR1-219ENST00000505392 SLC26A8Q96RN1 970 aa18.39■□□□□ 0.53
CCHCR1-219ENST00000505392 UBR1Q8IWV7 1749 aa18.39■□□□□ 0.53
CCHCR1-219ENST00000505392 CFAP65Q6ZU64 1925 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-219ENST00000505392 SLIT1O75093 1534 aa18.39■□□□□ 0.53
CCHCR1-219ENST00000505392 TMEM2Q9UHN6 1383 aa18.38■□□□□ 0.53
CCHCR1-219ENST00000505392 IDI1Q13907 227 aa18.37■□□□□ 0.53
CCHCR1-219ENST00000505392 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
CCHCR1-219ENST00000505392 ARHGAP31Q2M1Z3 1444 aa18.35■□□□□ 0.53
CCHCR1-219ENST00000505392 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
CCHCR1-219ENST00000505392 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
CCHCR1-219ENST00000505392 KANK4Q5T7N3 995 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-219ENST00000505392 XIRP1Q702N8 1843 aaKnown RBP18.33■□□□□ 0.53
CCHCR1-219ENST00000505392 BCANQ96GW7 911 aa18.33■□□□□ 0.52
CCHCR1-219ENST00000505392 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
CCHCR1-219ENST00000505392 EIF2AK4Q9P2K8 1649 aaKnown RBP18.33■□□□□ 0.52
CCHCR1-219ENST00000505392 CEP152O94986 1710 aa18.32■□□□□ 0.52
CCHCR1-219ENST00000505392 DUOX2Q9NRD8 1548 aa18.31■□□□□ 0.52
CCHCR1-219ENST00000505392 LRRC9Q6ZRR7 1453 aa18.31■□□□□ 0.52
CCHCR1-219ENST00000505392 MYOM3Q5VTT5 1437 aa18.31■□□□□ 0.52
CCHCR1-219ENST00000505392 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
CCHCR1-219ENST00000505392 MSH6P52701 1360 aa18.28■□□□□ 0.52
CCHCR1-219ENST00000505392 KANK1Q14678 1352 aa18.28■□□□□ 0.52
CCHCR1-219ENST00000505392 JCADQ9P266 1359 aa18.28■□□□□ 0.52
CCHCR1-219ENST00000505392 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
CCHCR1-219ENST00000505392 PIK3C2BO00750 1634 aa18.27■□□□□ 0.51
CCHCR1-219ENST00000505392 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
CCHCR1-219ENST00000505392 EFCAB6Q5THR3 1501 aa18.25■□□□□ 0.51
CCHCR1-219ENST00000505392 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCHCR1-219ENST00000505392 TET3O43151 1660 aa18.25■□□□□ 0.51
CCHCR1-219ENST00000505392 ERBINQ96RT1 1412 aa18.24■□□□□ 0.51
CCHCR1-219ENST00000505392 PRDM15P57071 1507 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-219ENST00000505392 ABCC5O15440 1437 aa18.23■□□□□ 0.51
CCHCR1-219ENST00000505392 MEX3CQ5U5Q3 659 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-219ENST00000505392 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
CCHCR1-219ENST00000505392 SLC52A1Q9NWF4 448 aa18.23■□□□□ 0.51
CCHCR1-219ENST00000505392 CHIC2Q9UKJ5 165 aa18.23■□□□□ 0.51
CCHCR1-219ENST00000505392 ZNF772Q68DY9 489 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-219ENST00000505392 HDGFP51858 240 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-219ENST00000505392 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
CCHCR1-219ENST00000505392 SPATA31A6Q5VVP1 1343 aa18.2■□□□□ 0.5
CCHCR1-219ENST00000505392 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
CCHCR1-219ENST00000505392 NKTRP30414 1462 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-219ENST00000505392 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms