RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 KIF3BO15066 747 aa19.49■□□□□ 0.71
COL25A1-205ENST00000505377 TNRQ92752 1358 aa19.48■□□□□ 0.71
COL25A1-205ENST00000505377 NEURL4Q96JN8 1562 aa19.47■□□□□ 0.71
COL25A1-205ENST00000505377 RTEL1-TNFRSF6BF6WH68 1400 aa19.45■□□□□ 0.7
COL25A1-205ENST00000505377 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
COL25A1-205ENST00000505377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL25A1-205ENST00000505377 PZPP20742 1482 aa19.41■□□□□ 0.7
COL25A1-205ENST00000505377 TOM1O60784 492 aa19.41■□□□□ 0.7
COL25A1-205ENST00000505377 WASHC2CQ9Y4E1 1318 aa19.41■□□□□ 0.7
COL25A1-205ENST00000505377 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
COL25A1-205ENST00000505377 EHBP1L1Q8N3D4 1523 aa19.41■□□□□ 0.7
COL25A1-205ENST00000505377 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
COL25A1-205ENST00000505377 POLR1AO95602 1720 aaPredicted RBP19.4■□□□□ 0.7
COL25A1-205ENST00000505377 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
COL25A1-205ENST00000505377 MIA2Q96PC5 1412 aa19.39■□□□□ 0.69
COL25A1-205ENST00000505377 CPS1P31327 1500 aa19.39■□□□□ 0.69
COL25A1-205ENST00000505377 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
COL25A1-205ENST00000505377 CCDC141Q6ZP82 1450 aa19.38■□□□□ 0.69
COL25A1-205ENST00000505377 KDM5DQ9BY66 1539 aa19.38■□□□□ 0.69
COL25A1-205ENST00000505377 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
COL25A1-205ENST00000505377 ALKQ9UM73 1620 aa19.38■□□□□ 0.69
COL25A1-205ENST00000505377 CAMSAP2Q08AD1 1489 aa19.37■□□□□ 0.69
COL25A1-205ENST00000505377 THEMISQ8N1K5 641 aaPredicted RBP19.36■□□□□ 0.69
COL25A1-205ENST00000505377 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
COL25A1-205ENST00000505377 NPHP4O75161 1426 aaPredicted RBP19.35■□□□□ 0.69
COL25A1-205ENST00000505377 UGGT1Q9NYU2 1555 aa19.33■□□□□ 0.69
COL25A1-205ENST00000505377 MED14O60244 1454 aa19.32■□□□□ 0.68
COL25A1-205ENST00000505377 NLRP1Q9C000 1473 aa19.32■□□□□ 0.68
COL25A1-205ENST00000505377 STRCP1A6NGW2 1772 aa19.3■□□□□ 0.68
COL25A1-205ENST00000505377 RSPH4AQ5TD94 716 aa19.3■□□□□ 0.68
COL25A1-205ENST00000505377 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
COL25A1-205ENST00000505377 TSPY4P0CV99 314 aa19.28■□□□□ 0.68
COL25A1-205ENST00000505377 TSPY10P0CW01 314 aa19.28■□□□□ 0.68
COL25A1-205ENST00000505377 DEPDC5O75140 1603 aa19.28■□□□□ 0.68
COL25A1-205ENST00000505377 LRRC7Q96NW7 1537 aa19.27■□□□□ 0.68
COL25A1-205ENST00000505377 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
COL25A1-205ENST00000505377 ABCC3O15438 1527 aa19.26■□□□□ 0.67
COL25A1-205ENST00000505377 ARHGEF5Q12774 1597 aa19.26■□□□□ 0.67
COL25A1-205ENST00000505377 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
COL25A1-205ENST00000505377 CFAP65Q6ZU64 1925 aaKnown RBP19.23■□□□□ 0.67
COL25A1-205ENST00000505377 ERVK-7P63135 1459 aa19.23■□□□□ 0.67
COL25A1-205ENST00000505377 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
COL25A1-205ENST00000505377 LTKP29376 864 aa19.21■□□□□ 0.67
COL25A1-205ENST00000505377 MROH1Q8NDA8 1641 aa19.2■□□□□ 0.66
COL25A1-205ENST00000505377 KANK4Q5T7N3 995 aaPredicted RBP19.19■□□□□ 0.66
COL25A1-205ENST00000505377 RGS17Q9UGC6 210 aaPredicted RBP19.19■□□□□ 0.66
COL25A1-205ENST00000505377 ZC3H13Q5T200 1668 aaKnown RBP19.17■□□□□ 0.66
COL25A1-205ENST00000505377 TXNDC2Q86VQ3 553 aa19.17■□□□□ 0.66
COL25A1-205ENST00000505377 CEP152O94986 1710 aa19.17■□□□□ 0.66
COL25A1-205ENST00000505377 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
COL25A1-205ENST00000505377 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
COL25A1-205ENST00000505377 UBR1Q8IWV7 1749 aa19.16■□□□□ 0.66
COL25A1-205ENST00000505377 SCAF11Q99590 1463 aaKnown RBP19.16■□□□□ 0.66
COL25A1-205ENST00000505377 SYNMO15061 1565 aa19.14■□□□□ 0.65
COL25A1-205ENST00000505377 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
COL25A1-205ENST00000505377 ARHGAP23Q9P227 1491 aa19.12■□□□□ 0.65
COL25A1-205ENST00000505377 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
COL25A1-205ENST00000505377 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
COL25A1-205ENST00000505377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL25A1-205ENST00000505377 SLIT1O75093 1534 aa19.1■□□□□ 0.65
COL25A1-205ENST00000505377 RBM33Q96EV2 1170 aaKnown RBP19.09■□□□□ 0.65
COL25A1-205ENST00000505377 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
COL25A1-205ENST00000505377 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.65
COL25A1-205ENST00000505377 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.65
COL25A1-205ENST00000505377 DUOX2Q9NRD8 1548 aa19.08■□□□□ 0.64
COL25A1-205ENST00000505377 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
COL25A1-205ENST00000505377 POTEAQ6S8J7 498 aa19.06■□□□□ 0.64
COL25A1-205ENST00000505377 EID1Q9Y6B2 187 aa19.06■□□□□ 0.64
COL25A1-205ENST00000505377 ARHGAP31Q2M1Z3 1444 aa19.06■□□□□ 0.64
COL25A1-205ENST00000505377 TMEM2Q9UHN6 1383 aa19.06■□□□□ 0.64
COL25A1-205ENST00000505377 PIK3C2BO00750 1634 aa19.05■□□□□ 0.64
COL25A1-205ENST00000505377 ABCC5O15440 1437 aa19.05■□□□□ 0.64
COL25A1-205ENST00000505377 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
COL25A1-205ENST00000505377 IDI1Q13907 227 aa19.03■□□□□ 0.64
COL25A1-205ENST00000505377 SLC26A8Q96RN1 970 aa19.03■□□□□ 0.64
COL25A1-205ENST00000505377 PRDM15P57071 1507 aaPredicted RBP19.03■□□□□ 0.64
COL25A1-205ENST00000505377 FAM135BQ49AJ0 1406 aa19.02■□□□□ 0.64
COL25A1-205ENST00000505377 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
COL25A1-205ENST00000505377 KCNA6P17658 529 aa19■□□□□ 0.63
COL25A1-205ENST00000505377 PROSER2Q86WR7 435 aaPredicted RBP19■□□□□ 0.63
COL25A1-205ENST00000505377 ERBINQ96RT1 1412 aa19■□□□□ 0.63
COL25A1-205ENST00000505377 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
COL25A1-205ENST00000505377 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
COL25A1-205ENST00000505377 EFCAB6Q5THR3 1501 aa18.96■□□□□ 0.63
COL25A1-205ENST00000505377 TET3O43151 1660 aa18.96■□□□□ 0.63
COL25A1-205ENST00000505377 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
COL25A1-205ENST00000505377 ROBO1Q9Y6N7 1651 aa18.95■□□□□ 0.62
COL25A1-205ENST00000505377 DAPK1P53355 1430 aa18.95■□□□□ 0.62
COL25A1-205ENST00000505377 KANK1Q14678 1352 aa18.94■□□□□ 0.62
COL25A1-205ENST00000505377 PTPN23Q9H3S7 1636 aa18.94■□□□□ 0.62
COL25A1-205ENST00000505377 NOS1P29475 1434 aa18.91■□□□□ 0.62
COL25A1-205ENST00000505377 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
COL25A1-205ENST00000505377 BCANQ96GW7 911 aa18.91■□□□□ 0.62
COL25A1-205ENST00000505377 SLAIN2Q9P270 581 aa18.89■□□□□ 0.61
COL25A1-205ENST00000505377 ANKRD30AQ9BXX3 1397 aa18.88■□□□□ 0.61
COL25A1-205ENST00000505377 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
COL25A1-205ENST00000505377 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
COL25A1-205ENST00000505377 KDM5AP29375 1690 aaKnown RBP18.88■□□□□ 0.61
COL25A1-205ENST00000505377 NWD1Q149M9 1564 aa18.87■□□□□ 0.61
COL25A1-205ENST00000505377 SETD1AO15047 1707 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms