RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CCNB3Q8WWL7 1395 aa25.9■■□□□ 1.74
PDLIM7-213ENST00000505074 TNRQ92752 1358 aa25.86■■□□□ 1.73
PDLIM7-213ENST00000505074 ANKLE2Q86XL3 938 aa25.84■■□□□ 1.73
PDLIM7-213ENST00000505074 VWDEQ8N2E2 1590 aa25.83■■□□□ 1.73
PDLIM7-213ENST00000505074 FBXO31Q5XUX0 539 aaPredicted RBP25.82■■□□□ 1.72
PDLIM7-213ENST00000505074 DHX29Q7Z478 1369 aaKnown RBP25.81■■□□□ 1.72
PDLIM7-213ENST00000505074 PZPP20742 1482 aa25.8■■□□□ 1.72
PDLIM7-213ENST00000505074 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
PDLIM7-213ENST00000505074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.8■■□□□ 1.722e-6■■■■□ 23.1
PDLIM7-213ENST00000505074 RTEL1-TNFRSF6BF6WH68 1400 aa25.8■■□□□ 1.72
PDLIM7-213ENST00000505074 ALKQ9UM73 1620 aa25.79■■□□□ 1.72
PDLIM7-213ENST00000505074 KDM5DQ9BY66 1539 aa25.78■■□□□ 1.72
PDLIM7-213ENST00000505074 FAM135AQ9P2D6 1515 aa25.78■■□□□ 1.72
PDLIM7-213ENST00000505074 DEPDC5O75140 1603 aa25.78■■□□□ 1.72
PDLIM7-213ENST00000505074 MTUS2Q5JR59 1369 aa25.78■■□□□ 1.72
PDLIM7-213ENST00000505074 KIF3BO15066 747 aa25.76■■□□□ 1.71
PDLIM7-213ENST00000505074 ZNF644Q9H582 1327 aaPredicted RBP25.76■■□□□ 1.71
PDLIM7-213ENST00000505074 NPHP4O75161 1426 aaPredicted RBP25.76■■□□□ 1.71
PDLIM7-213ENST00000505074 MED14O60244 1454 aa25.76■■□□□ 1.71
PDLIM7-213ENST00000505074 MBD5Q9P267 1494 aa25.76■■□□□ 1.71
PDLIM7-213ENST00000505074 UGGT1Q9NYU2 1555 aa25.75■■□□□ 1.71
PDLIM7-213ENST00000505074 NLRP1Q9C000 1473 aa25.75■■□□□ 1.71
PDLIM7-213ENST00000505074 IQGAP1P46940 1657 aa25.74■■□□□ 1.71
PDLIM7-213ENST00000505074 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
PDLIM7-213ENST00000505074 WASHC2CQ9Y4E1 1318 aa25.73■■□□□ 1.71
PDLIM7-213ENST00000505074 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
PDLIM7-213ENST00000505074 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
PDLIM7-213ENST00000505074 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.7
PDLIM7-213ENST00000505074 STRCP1A6NGW2 1772 aa25.69■■□□□ 1.7
PDLIM7-213ENST00000505074 SYNMO15061 1565 aa25.69■■□□□ 1.7
PDLIM7-213ENST00000505074 LRRC7Q96NW7 1537 aa25.67■■□□□ 1.7
PDLIM7-213ENST00000505074 EHBP1L1Q8N3D4 1523 aa25.64■■□□□ 1.7
PDLIM7-213ENST00000505074 CCDC141Q6ZP82 1450 aa25.64■■□□□ 1.69
PDLIM7-213ENST00000505074 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
PDLIM7-213ENST00000505074 RSPH4AQ5TD94 716 aa25.61■■□□□ 1.69
PDLIM7-213ENST00000505074 RGS17Q9UGC6 210 aaPredicted RBP25.57■■□□□ 1.68
PDLIM7-213ENST00000505074 ZC3H13Q5T200 1668 aaKnown RBP25.57■■□□□ 1.68
PDLIM7-213ENST00000505074 CAMSAP2Q08AD1 1489 aa25.56■■□□□ 1.68
PDLIM7-213ENST00000505074 CFAP65Q6ZU64 1925 aaKnown RBP25.52■■□□□ 1.68
PDLIM7-213ENST00000505074 TSPY4P0CV99 314 aa25.51■■□□□ 1.67
PDLIM7-213ENST00000505074 TSPY10P0CW01 314 aa25.51■■□□□ 1.67
PDLIM7-213ENST00000505074 ABCC3O15438 1527 aa25.51■■□□□ 1.67
PDLIM7-213ENST00000505074 UBR1Q8IWV7 1749 aa25.51■■□□□ 1.67
PDLIM7-213ENST00000505074 XIRP1Q702N8 1843 aaKnown RBP25.51■■□□□ 1.67
PDLIM7-213ENST00000505074 ARHGEF5Q12774 1597 aa25.5■■□□□ 1.67
PDLIM7-213ENST00000505074 ERVK-7P63135 1459 aa25.49■■□□□ 1.67
PDLIM7-213ENST00000505074 SCAF11Q99590 1463 aaKnown RBP25.48■■□□□ 1.67
PDLIM7-213ENST00000505074 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
PDLIM7-213ENST00000505074 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.66
PDLIM7-213ENST00000505074 CEP152O94986 1710 aa25.43■■□□□ 1.66
PDLIM7-213ENST00000505074 TXNDC2Q86VQ3 553 aa25.42■■□□□ 1.66
PDLIM7-213ENST00000505074 FAM135BQ49AJ0 1406 aa25.42■■□□□ 1.66
PDLIM7-213ENST00000505074 LOC105371045A0A1W2PR82 267 aa25.41■■□□□ 1.66
PDLIM7-213ENST00000505074 POTEAQ6S8J7 498 aa25.41■■□□□ 1.66
PDLIM7-213ENST00000505074 LTKP29376 864 aa25.4■■□□□ 1.66
PDLIM7-213ENST00000505074 SLIT1O75093 1534 aa25.4■■□□□ 1.66
PDLIM7-213ENST00000505074 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
PDLIM7-213ENST00000505074 MAST1Q9Y2H9 1570 aa25.39■■□□□ 1.66
PDLIM7-213ENST00000505074 MROH1Q8NDA8 1641 aa25.38■■□□□ 1.65
PDLIM7-213ENST00000505074 EID1Q9Y6B2 187 aa25.38■■□□□ 1.65
PDLIM7-213ENST00000505074 VPS8Q8N3P4 1428 aa25.35■■□□□ 1.65
PDLIM7-213ENST00000505074 ROBO1Q9Y6N7 1651 aa25.34■■□□□ 1.65
PDLIM7-213ENST00000505074 TMEM94Q12767 1356 aa25.3■■□□□ 1.64
PDLIM7-213ENST00000505074 SETD1AO15047 1707 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-213ENST00000505074 PIK3C2BO00750 1634 aa25.29■■□□□ 1.64
PDLIM7-213ENST00000505074 ARHGAP31Q2M1Z3 1444 aa25.28■■□□□ 1.64
PDLIM7-213ENST00000505074 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
PDLIM7-213ENST00000505074 TMEM2Q9UHN6 1383 aa25.27■■□□□ 1.64
PDLIM7-213ENST00000505074 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
PDLIM7-213ENST00000505074 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
PDLIM7-213ENST00000505074 KCNA6P17658 529 aa25.25■■□□□ 1.63
PDLIM7-213ENST00000505074 PROSER2Q86WR7 435 aaPredicted RBP25.25■■□□□ 1.63
PDLIM7-213ENST00000505074 KDM5AP29375 1690 aaKnown RBP25.24■■□□□ 1.63
PDLIM7-213ENST00000505074 PRDM15P57071 1507 aaPredicted RBP25.23■■□□□ 1.63
PDLIM7-213ENST00000505074 MAP3K1Q13233 1512 aa25.23■■□□□ 1.63
PDLIM7-213ENST00000505074 PHLPP1O60346 1717 aa25.23■■□□□ 1.63
PDLIM7-213ENST00000505074 EFCAB6Q5THR3 1501 aa25.2■■□□□ 1.62
PDLIM7-213ENST00000505074 RBM33Q96EV2 1170 aaKnown RBP25.19■■□□□ 1.62
PDLIM7-213ENST00000505074 TET3O43151 1660 aa25.18■■□□□ 1.62
PDLIM7-213ENST00000505074 SLC26A8Q96RN1 970 aa25.18■■□□□ 1.62
PDLIM7-213ENST00000505074 JCADQ9P266 1359 aa25.18■■□□□ 1.62
PDLIM7-213ENST00000505074 NKTRP30414 1462 aaKnown RBP25.17■■□□□ 1.62
PDLIM7-213ENST00000505074 MSH6P52701 1360 aa25.17■■□□□ 1.62
PDLIM7-213ENST00000505074 MYOM3Q5VTT5 1437 aa25.16■■□□□ 1.62
PDLIM7-213ENST00000505074 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
PDLIM7-213ENST00000505074 ERBINQ96RT1 1412 aa25.15■■□□□ 1.62
PDLIM7-213ENST00000505074 KANK4Q5T7N3 995 aaPredicted RBP25.15■■□□□ 1.62
PDLIM7-213ENST00000505074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.62
PDLIM7-213ENST00000505074 SLAIN2Q9P270 581 aa25.14■■□□□ 1.62
PDLIM7-213ENST00000505074 KIF15Q9NS87 1388 aa25.14■■□□□ 1.61
PDLIM7-213ENST00000505074 IDI1Q13907 227 aa25.13■■□□□ 1.61
PDLIM7-213ENST00000505074 KANK1Q14678 1352 aa25.13■■□□□ 1.61
PDLIM7-213ENST00000505074 APLP2Q06481 763 aa25.12■■□□□ 1.61
PDLIM7-213ENST00000505074 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
PDLIM7-213ENST00000505074 BCANQ96GW7 911 aa25.1■■□□□ 1.61
PDLIM7-213ENST00000505074 RRP7BPQ9NSQ0 103 aa25.09■■□□□ 1.61
PDLIM7-213ENST00000505074 UPF1Q92900 1129 aaKnown RBP eCLIP25.08■■□□□ 1.61
PDLIM7-213ENST00000505074 COL16A1Q07092 1604 aaPredicted RBP25.08■■□□□ 1.6
PDLIM7-213ENST00000505074 ADGRB3O60242 1522 aa25.07■■□□□ 1.6
PDLIM7-213ENST00000505074 MEX3CQ5U5Q3 659 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms