RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 LHX8Q68G74 356 aa9.91□□□□□ -0.82
CDH9-202ENST00000505020 PARP9Q8IXQ6 854 aa9.91□□□□□ -0.82
CDH9-202ENST00000505020 SUGT1Q9Y2Z0 365 aa9.9□□□□□ -0.82
CDH9-202ENST00000505020 TSR1Q2NL82 804 aaKnown RBP9.89□□□□□ -0.83
CDH9-202ENST00000505020 GPATCH11Q8N954 259 aa9.89□□□□□ -0.83
CDH9-202ENST00000505020 ZNF330Q9Y3S2 320 aaPredicted RBP9.89□□□□□ -0.83
CDH9-202ENST00000505020 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
CDH9-202ENST00000505020 GORABQ5T7V8 394 aa9.89□□□□□ -0.83
CDH9-202ENST00000505020 DNAJC2Q99543 621 aaKnown RBP9.89□□□□□ -0.83
CDH9-202ENST00000505020 RBM27Q9P2N5 1060 aaKnown RBP9.89□□□□□ -0.83
CDH9-202ENST00000505020 MICAL1Q8TDZ2 1067 aa9.88□□□□□ -0.83
CDH9-202ENST00000505020 FAM50AQ14320 339 aaKnown RBP9.87□□□□□ -0.83
CDH9-202ENST00000505020 SLC52A1Q9NWF4 448 aa9.87□□□□□ -0.83
CDH9-202ENST00000505020 COG6Q9Y2V7 657 aa9.86□□□□□ -0.83
CDH9-202ENST00000505020 LAS1LQ9Y4W2 734 aaKnown RBP9.86□□□□□ -0.83
CDH9-202ENST00000505020 SPTY2D1Q68D10 685 aaPredicted RBP9.85□□□□□ -0.83
CDH9-202ENST00000505020 ZNF662Q6ZS27 426 aa9.85□□□□□ -0.83
CDH9-202ENST00000505020 C8orf37Q96NL8 207 aa9.85□□□□□ -0.83
CDH9-202ENST00000505020 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.83
CDH9-202ENST00000505020 TCF3P15923 654 aa9.84□□□□□ -0.83
CDH9-202ENST00000505020 GRIPAP1Q4V328 841 aa9.84□□□□□ -0.83
CDH9-202ENST00000505020 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDH9-202ENST00000505020 GIMAP6Q6P9H5 292 aa9.83□□□□□ -0.84
CDH9-202ENST00000505020 TMTC2Q8N394 836 aa9.83□□□□□ -0.84
CDH9-202ENST00000505020 UBXN4Q92575 508 aa9.83□□□□□ -0.84
CDH9-202ENST00000505020 MCCP23508 829 aa9.82□□□□□ -0.84
CDH9-202ENST00000505020 SGSM3Q96HU1 749 aa9.82□□□□□ -0.84
CDH9-202ENST00000505020 AMHR2Q16671 573 aa9.82□□□□□ -0.84
CDH9-202ENST00000505020 TXNDC2Q86VQ3 553 aa9.82□□□□□ -0.84
CDH9-202ENST00000505020 CCDC102AQ96A19 550 aa9.82□□□□□ -0.84
CDH9-202ENST00000505020 USTQ9Y2C2 406 aa9.82□□□□□ -0.84
CDH9-202ENST00000505020 RAB11FIP3O75154 756 aa9.81□□□□□ -0.84
CDH9-202ENST00000505020 SKIV2LQ15477 1246 aaKnown RBP9.81□□□□□ -0.84
CDH9-202ENST00000505020 HAX1O00165 279 aa9.8□□□□□ -0.84
CDH9-202ENST00000505020 CHRM1P11229 460 aaPredicted RBP9.8□□□□□ -0.84
CDH9-202ENST00000505020 PPP1R37O75864 691 aa9.79□□□□□ -0.84
CDH9-202ENST00000505020 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
CDH9-202ENST00000505020 MINK1Q8N4C8 1332 aaPredicted RBP9.78□□□□□ -0.84
CDH9-202ENST00000505020 FAM43BQ6ZT52 329 aaPredicted RBP9.78□□□□□ -0.84
CDH9-202ENST00000505020 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.84
CDH9-202ENST00000505020 FOSBP53539 338 aa9.77□□□□□ -0.84
CDH9-202ENST00000505020 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.84
CDH9-202ENST00000505020 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.84
CDH9-202ENST00000505020 GPR37O15354 613 aa9.77□□□□□ -0.85
CDH9-202ENST00000505020 APBB1IPQ7Z5R6 666 aaPredicted RBP9.77□□□□□ -0.85
CDH9-202ENST00000505020 TERF2IPQ9NYB0 399 aa9.77□□□□□ -0.85
CDH9-202ENST00000505020 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
CDH9-202ENST00000505020 PBXIP1Q96AQ6 731 aa9.75□□□□□ -0.85
CDH9-202ENST00000505020 MFRPQ9BY79 579 aa9.75□□□□□ -0.85
CDH9-202ENST00000505020 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
CDH9-202ENST00000505020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.75□□□□□ -0.85
CDH9-202ENST00000505020 TBC1D12O60347 775 aa9.75□□□□□ -0.85
CDH9-202ENST00000505020 MS4A1P11836 297 aa9.75□□□□□ -0.85
CDH9-202ENST00000505020 TTLL12Q14166 644 aaPredicted RBP9.75□□□□□ -0.85
CDH9-202ENST00000505020 RALBP1Q15311 655 aa9.75□□□□□ -0.85
CDH9-202ENST00000505020 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
CDH9-202ENST00000505020 ABCB7O75027 752 aa9.74□□□□□ -0.85
CDH9-202ENST00000505020 RFX1P22670 979 aa9.74□□□□□ -0.85
CDH9-202ENST00000505020 MCCD1P59942 119 aaPredicted RBP9.74□□□□□ -0.85
CDH9-202ENST00000505020 IRF6O14896 467 aa9.73□□□□□ -0.85
CDH9-202ENST00000505020 ZC3H6P61129 1189 aaKnown RBP9.73□□□□□ -0.85
CDH9-202ENST00000505020 FAM9BQ8IZU0 186 aa9.73□□□□□ -0.85
CDH9-202ENST00000505020 MORC4Q8TE76 937 aa9.73□□□□□ -0.85
CDH9-202ENST00000505020 FAM212AQ96EL1 285 aa9.73□□□□□ -0.85
CDH9-202ENST00000505020 SH3D19Q5HYK7 790 aa9.72□□□□□ -0.85
CDH9-202ENST00000505020 WWC1Q8IX03 1113 aa9.72□□□□□ -0.85
CDH9-202ENST00000505020 ZNF16P17020 682 aaPredicted RBP9.72□□□□□ -0.85
CDH9-202ENST00000505020 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
CDH9-202ENST00000505020 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
CDH9-202ENST00000505020 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.85
CDH9-202ENST00000505020 PEX14O75381 377 aa9.71□□□□□ -0.85
CDH9-202ENST00000505020 MAP2K5Q13163 448 aa9.71□□□□□ -0.85
CDH9-202ENST00000505020 NME8Q8N427 588 aa9.71□□□□□ -0.85
CDH9-202ENST00000505020 CDCA7Q9BWT1 371 aaPredicted RBP9.71□□□□□ -0.85
CDH9-202ENST00000505020 ATP1B4Q9UN42 357 aaPredicted RBP9.71□□□□□ -0.85
CDH9-202ENST00000505020 SPDYE2BA6NHP3 402 aa9.7□□□□□ -0.86
CDH9-202ENST00000505020 SPDYE5A6NIY4 337 aa9.7□□□□□ -0.86
CDH9-202ENST00000505020 MAP4K4O95819 1239 aaPredicted RBP9.7□□□□□ -0.86
CDH9-202ENST00000505020 SPDYE6P0CI01 402 aa9.7□□□□□ -0.86
CDH9-202ENST00000505020 PYGBP11216 843 aa9.7□□□□□ -0.86
CDH9-202ENST00000505020 RBM10P98175 930 aaKnown RBP9.7□□□□□ -0.86
CDH9-202ENST00000505020 SPDYE2Q495Y8 402 aa9.7□□□□□ -0.86
CDH9-202ENST00000505020 GLMNQ92990 594 aa9.7□□□□□ -0.86
CDH9-202ENST00000505020 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
CDH9-202ENST00000505020 SF3A1Q15459 793 aaKnown RBP9.7□□□□□ -0.86
CDH9-202ENST00000505020 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
CDH9-202ENST00000505020 NAALADL2Q58DX5 795 aa9.69□□□□□ -0.86
CDH9-202ENST00000505020 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
CDH9-202ENST00000505020 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
CDH9-202ENST00000505020 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
CDH9-202ENST00000505020 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
CDH9-202ENST00000505020 VRTNQ9H8Y1 702 aa9.68□□□□□ -0.86
CDH9-202ENST00000505020 KLHL42Q9P2K6 505 aa9.68□□□□□ -0.86
CDH9-202ENST00000505020 NEFMP07197 916 aa9.68□□□□□ -0.86
CDH9-202ENST00000505020 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
CDH9-202ENST00000505020 GPATCH3Q96I76 525 aa9.67□□□□□ -0.86
CDH9-202ENST00000505020 UBA5Q9GZZ9 404 aa9.67□□□□□ -0.86
CDH9-202ENST00000505020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDH9-202ENST00000505020 CCDC181Q5TID7 509 aa9.66□□□□□ -0.86
CDH9-202ENST00000505020 EVI5LQ96CN4 794 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms