RNA–Protein interactions for RNA: ENST00000504963.5

SDHC-207, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 4

Gene SDHC, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-207ENST00000504963 DEPDC5O75140 1603 aa10.16□□□□□ -0.78
SDHC-207ENST00000504963 ATP10AO60312 1499 aa10.16□□□□□ -0.78
SDHC-207ENST00000504963 ANKRD50Q9ULJ7 1429 aa10.16□□□□□ -0.78
SDHC-207ENST00000504963 RNF17Q9BXT8 1623 aaKnown RBP10.15□□□□□ -0.78
SDHC-207ENST00000504963 UNC13BO14795 1591 aa10.15□□□□□ -0.78
SDHC-207ENST00000504963 PPP6R1Q9UPN7 881 aa10.15□□□□□ -0.78
SDHC-207ENST00000504963 EIF2AK4Q9P2K8 1649 aaKnown RBP10.15□□□□□ -0.79
SDHC-207ENST00000504963 VWDEQ8N2E2 1590 aa10.14□□□□□ -0.79
SDHC-207ENST00000504963 AGLP35573 1532 aa10.14□□□□□ -0.79
SDHC-207ENST00000504963 PZPP20742 1482 aa10.13□□□□□ -0.79
SDHC-207ENST00000504963 ERBINQ96RT1 1412 aa10.13□□□□□ -0.79
SDHC-207ENST00000504963 PRDM15P57071 1507 aaPredicted RBP10.12□□□□□ -0.79
SDHC-207ENST00000504963 KDM5DQ9BY66 1539 aa10.12□□□□□ -0.79
SDHC-207ENST00000504963 CEP152O94986 1710 aa10.1□□□□□ -0.79
SDHC-207ENST00000504963 ADRA2BP18089 450 aa10.1□□□□□ -0.79
SDHC-207ENST00000504963 IQGAP3Q86VI3 1631 aa10.1□□□□□ -0.79
SDHC-207ENST00000504963 CFAP65Q6ZU64 1925 aaKnown RBP10.09□□□□□ -0.79
SDHC-207ENST00000504963 KIF3BO15066 747 aa10.08□□□□□ -0.8
SDHC-207ENST00000504963 HRCP23327 699 aa10.08□□□□□ -0.8
SDHC-207ENST00000504963 PLPPR3Q6T4P5 718 aa10.08□□□□□ -0.8
SDHC-207ENST00000504963 ABCC3O15438 1527 aa10.07□□□□□ -0.8
SDHC-207ENST00000504963 DHX57Q6P158 1386 aaKnown RBP10.07□□□□□ -0.8
SDHC-207ENST00000504963 FBXO41Q8TF61 875 aa10.07□□□□□ -0.8
SDHC-207ENST00000504963 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
SDHC-207ENST00000504963 FAM135AQ9P2D6 1515 aa10.07□□□□□ -0.8
SDHC-207ENST00000504963 ADAMTSL3P82987 1691 aa10.06□□□□□ -0.8
SDHC-207ENST00000504963 LMTK2Q8IWU2 1503 aa10.06□□□□□ -0.8
SDHC-207ENST00000504963 E9PCH4 1651 aa10.06□□□□□ -0.8
SDHC-207ENST00000504963 TET3O43151 1660 aa10.05□□□□□ -0.8
SDHC-207ENST00000504963 CLTCQ00610 1675 aaKnown RBP10.05□□□□□ -0.8
SDHC-207ENST00000504963 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
SDHC-207ENST00000504963 NUP155O75694 1391 aa10.04□□□□□ -0.8
SDHC-207ENST00000504963 PLA2R1Q13018 1463 aa10.04□□□□□ -0.8
SDHC-207ENST00000504963 CAMSAP1Q5T5Y3 1602 aa10.04□□□□□ -0.8
SDHC-207ENST00000504963 EFCAB6Q5THR3 1501 aa10.03□□□□□ -0.8
SDHC-207ENST00000504963 FER1L4A9Z1Z3 1794 aa10.03□□□□□ -0.8
SDHC-207ENST00000504963 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.8
SDHC-207ENST00000504963 GGT6Q6P531 493 aa10.02□□□□□ -0.81
SDHC-207ENST00000504963 NPATQ14207 1427 aa10.01□□□□□ -0.81
SDHC-207ENST00000504963 MLECQ14165 292 aa10.01□□□□□ -0.81
SDHC-207ENST00000504963 MPHOSPH9Q99550 1183 aa10.01□□□□□ -0.81
SDHC-207ENST00000504963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
SDHC-207ENST00000504963 MROH2AA6NES4 1674 aa10□□□□□ -0.81
SDHC-207ENST00000504963 C3P01024 1663 aa10□□□□□ -0.81
SDHC-207ENST00000504963 RIMS1Q86UR5 1692 aaKnown RBP10□□□□□ -0.81
SDHC-207ENST00000504963 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
SDHC-207ENST00000504963 SYNMO15061 1565 aa9.99□□□□□ -0.81
SDHC-207ENST00000504963 PREX1Q8TCU6 1659 aa9.99□□□□□ -0.81
SDHC-207ENST00000504963 ANKRD30BQ9BXX2 1392 aa9.99□□□□□ -0.81
SDHC-207ENST00000504963 SPHKAPQ2M3C7 1700 aa9.99□□□□□ -0.81
SDHC-207ENST00000504963 ARHGAP31Q2M1Z3 1444 aa9.99□□□□□ -0.81
SDHC-207ENST00000504963 PKD2Q13563 968 aa9.98□□□□□ -0.81
SDHC-207ENST00000504963 PTPRTO14522 1441 aa9.98□□□□□ -0.81
SDHC-207ENST00000504963 UGGT1Q9NYU2 1555 aa9.97□□□□□ -0.81
SDHC-207ENST00000504963 ARID4BQ4LE39 1312 aaPredicted RBP9.97□□□□□ -0.81
SDHC-207ENST00000504963 NOS1P29475 1434 aa9.97□□□□□ -0.81
SDHC-207ENST00000504963 CLTCL1P53675 1640 aa9.96□□□□□ -0.81
SDHC-207ENST00000504963 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.82
SDHC-207ENST00000504963 LMTK3Q96Q04 1460 aa9.96□□□□□ -0.82
SDHC-207ENST00000504963 SPATA31D1Q6ZQQ2 1576 aa9.96□□□□□ -0.82
SDHC-207ENST00000504963 PIK3C2BO00750 1634 aa9.96□□□□□ -0.82
SDHC-207ENST00000504963 FBXO31Q5XUX0 539 aaPredicted RBP9.95□□□□□ -0.82
SDHC-207ENST00000504963 WASHC2CQ9Y4E1 1318 aa9.95□□□□□ -0.82
SDHC-207ENST00000504963 ZMYM3Q14202 1370 aa9.95□□□□□ -0.82
SDHC-207ENST00000504963 KANK1Q14678 1352 aa9.95□□□□□ -0.82
SDHC-207ENST00000504963 PTPRMP28827 1452 aa9.95□□□□□ -0.82
SDHC-207ENST00000504963 ERVK-7P63135 1459 aa9.95□□□□□ -0.82
SDHC-207ENST00000504963 MYO5BQ9ULV0 1848 aa9.95□□□□□ -0.82
SDHC-207ENST00000504963 TRPM2O94759 1503 aa9.94□□□□□ -0.82
SDHC-207ENST00000504963 RPRD2Q5VT52 1461 aaKnown RBP9.94□□□□□ -0.82
SDHC-207ENST00000504963 CEBPAP49715 358 aaPredicted RBP9.94□□□□□ -0.82
SDHC-207ENST00000504963 SETD1BQ9UPS6 1966 aaKnown RBP9.94□□□□□ -0.82
SDHC-207ENST00000504963 CNTLNQ9NXG0 1405 aa9.93□□□□□ -0.82
SDHC-207ENST00000504963 ILDR2Q71H61 639 aa9.93□□□□□ -0.82
SDHC-207ENST00000504963 SIN3AQ96ST3 1273 aa9.93□□□□□ -0.82
SDHC-207ENST00000504963 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
SDHC-207ENST00000504963 SPATA31E1Q6ZUB1 1445 aa9.9□□□□□ -0.83
SDHC-207ENST00000504963 TMEM131LA2VDJ0 1609 aa9.89□□□□□ -0.83
SDHC-207ENST00000504963 KIF1BO60333 1816 aa9.89□□□□□ -0.83
SDHC-207ENST00000504963 ADGRB3O60242 1522 aa9.88□□□□□ -0.83
SDHC-207ENST00000504963 SOCS7O14512 581 aa9.88□□□□□ -0.83
SDHC-207ENST00000504963 MYO3AQ8NEV4 1616 aa9.88□□□□□ -0.83
SDHC-207ENST00000504963 UBR1Q8IWV7 1749 aa9.87□□□□□ -0.83
SDHC-207ENST00000504963 IFT172Q9UG01 1749 aa9.87□□□□□ -0.83
SDHC-207ENST00000504963 CLSPNQ9HAW4 1339 aa9.87□□□□□ -0.83
SDHC-207ENST00000504963 IDI1Q13907 227 aa9.87□□□□□ -0.83
SDHC-207ENST00000504963 CCER1Q8TC90 406 aaPredicted RBP9.87□□□□□ -0.83
SDHC-207ENST00000504963 TNRQ92752 1358 aa9.87□□□□□ -0.83
SDHC-207ENST00000504963 NEURL4Q96JN8 1562 aa9.86□□□□□ -0.83
SDHC-207ENST00000504963 ZNF142P52746 1687 aaPredicted RBP9.86□□□□□ -0.83
SDHC-207ENST00000504963 PPLO60437 1756 aa9.85□□□□□ -0.83
SDHC-207ENST00000504963 KDM5AP29375 1690 aaKnown RBP9.84□□□□□ -0.83
SDHC-207ENST00000504963 CCDC144AA2RUR9 1427 aa9.84□□□□□ -0.83
SDHC-207ENST00000504963 A2ML1A8K2U0 1454 aa9.84□□□□□ -0.83
SDHC-207ENST00000504963 NEXMIFQ5QGS0 1516 aa9.83□□□□□ -0.84
SDHC-207ENST00000504963 CEP170BQ9Y4F5 1589 aaPredicted RBP9.83□□□□□ -0.84
SDHC-207ENST00000504963 NEUROD1Q13562 356 aa9.82□□□□□ -0.84
SDHC-207ENST00000504963 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
SDHC-207ENST00000504963 NLRP1Q9C000 1473 aa9.82□□□□□ -0.84
SDHC-207ENST00000504963 ZFYVE9O95405 1425 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms