RNA–Protein interactions for RNA: ENST00000504842.5

PROM1-205, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-205ENST00000504842 PDE4DQ08499 809 aa9.82□□□□□ -0.84
PROM1-205ENST00000504842 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
PROM1-205ENST00000504842 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
PROM1-205ENST00000504842 HOMEZQ8IX15 550 aa9.81□□□□□ -0.84
PROM1-205ENST00000504842 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
PROM1-205ENST00000504842 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
PROM1-205ENST00000504842 NUTM2FA1L443 756 aa9.78□□□□□ -0.84
PROM1-205ENST00000504842 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
PROM1-205ENST00000504842 MINK1Q8N4C8 1332 aaPredicted RBP9.78□□□□□ -0.84
PROM1-205ENST00000504842 SLC34A2O95436 690 aa9.76□□□□□ -0.85
PROM1-205ENST00000504842 PBX2P40425 430 aa9.76□□□□□ -0.85
PROM1-205ENST00000504842 SUPT5HO00267 1087 aaKnown RBP9.75□□□□□ -0.85
PROM1-205ENST00000504842 AXIN2Q9Y2T1 843 aa9.75□□□□□ -0.85
PROM1-205ENST00000504842 GPR37O15354 613 aa9.74□□□□□ -0.85
PROM1-205ENST00000504842 TBC1D12O60347 775 aa9.73□□□□□ -0.85
PROM1-205ENST00000504842 MAP2K5Q13163 448 aa9.73□□□□□ -0.85
PROM1-205ENST00000504842 PSDA5PKW4 1024 aaPredicted RBP9.72□□□□□ -0.85
PROM1-205ENST00000504842 UPF1Q92900 1129 aaKnown RBP eCLIP9.72□□□□□ -0.85
PROM1-205ENST00000504842 GNPATO15228 680 aa9.71□□□□□ -0.86
PROM1-205ENST00000504842 IRF6O14896 467 aa9.7□□□□□ -0.86
PROM1-205ENST00000504842 FCHSD2O94868 740 aa9.7□□□□□ -0.86
PROM1-205ENST00000504842 HIC1Q14526 733 aa9.7□□□□□ -0.86
PROM1-205ENST00000504842 CCDC102AQ96A19 550 aa9.7□□□□□ -0.86
PROM1-205ENST00000504842 DDRGK1Q96HY6 314 aa9.7□□□□□ -0.86
PROM1-205ENST00000504842 OSBPP22059 807 aa9.69□□□□□ -0.86
PROM1-205ENST00000504842 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
PROM1-205ENST00000504842 STAC3Q96MF2 364 aa9.68□□□□□ -0.86
PROM1-205ENST00000504842 ARHGAP33O14559 1287 aa9.67□□□□□ -0.86
PROM1-205ENST00000504842 AMHR2Q16671 573 aa9.67□□□□□ -0.86
PROM1-205ENST00000504842 DDX12PQ92771 950 aa9.67□□□□□ -0.86
PROM1-205ENST00000504842 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
PROM1-205ENST00000504842 FAM117AQ9C073 453 aa9.67□□□□□ -0.86
PROM1-205ENST00000504842 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
PROM1-205ENST00000504842 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
PROM1-205ENST00000504842 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.86
PROM1-205ENST00000504842 EVI5O60447 810 aa9.64□□□□□ -0.87
PROM1-205ENST00000504842 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
PROM1-205ENST00000504842 TTLL12Q14166 644 aaPredicted RBP9.63□□□□□ -0.87
PROM1-205ENST00000504842 POTEEQ6S8J3 1075 aa9.63□□□□□ -0.87
PROM1-205ENST00000504842 RSPH6AQ9H0K4 717 aa9.63□□□□□ -0.87
PROM1-205ENST00000504842 PARP9Q8IXQ6 854 aa9.62□□□□□ -0.87
PROM1-205ENST00000504842 PSEN2P49810 448 aa9.61□□□□□ -0.87
PROM1-205ENST00000504842 FECHP22830 423 aa9.6□□□□□ -0.87
PROM1-205ENST00000504842 HCSTQ9UBK5 93 aa9.6□□□□□ -0.87
PROM1-205ENST00000504842 PLEKHG3A1L390 1219 aa9.59□□□□□ -0.87
PROM1-205ENST00000504842 PTGDRQ13258 359 aa9.59□□□□□ -0.87
PROM1-205ENST00000504842 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
PROM1-205ENST00000504842 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
PROM1-205ENST00000504842 GOPCQ9HD26 462 aa9.57□□□□□ -0.88
PROM1-205ENST00000504842 TK2O00142 265 aa9.56□□□□□ -0.88
PROM1-205ENST00000504842 FLIIQ13045 1269 aa9.56□□□□□ -0.88
PROM1-205ENST00000504842 ZNF454Q8N9F8 522 aa9.56□□□□□ -0.88
PROM1-205ENST00000504842 KCTD12Q96CX2 325 aaKnown RBP9.55□□□□□ -0.88
PROM1-205ENST00000504842 EPAS1Q99814 870 aa9.55□□□□□ -0.88
PROM1-205ENST00000504842 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
PROM1-205ENST00000504842 KDM4FA0A1W2PPD8 638 aa9.54□□□□□ -0.88
PROM1-205ENST00000504842 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
PROM1-205ENST00000504842 GIGYF2Q6Y7W6 1299 aaKnown RBP9.54□□□□□ -0.88
PROM1-205ENST00000504842 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
PROM1-205ENST00000504842 PHF14O94880 888 aa9.53□□□□□ -0.88
PROM1-205ENST00000504842 PCMTD1Q96MG8 357 aaPredicted RBP9.53□□□□□ -0.88
PROM1-205ENST00000504842 MAP3K7O43318 606 aa9.52□□□□□ -0.89
PROM1-205ENST00000504842 EN1Q05925 392 aaPredicted RBP9.52□□□□□ -0.89
PROM1-205ENST00000504842 CLCN1P35523 988 aa9.51□□□□□ -0.89
PROM1-205ENST00000504842 GOLGA8CPA6NN73 597 aa9.49□□□□□ -0.89
PROM1-205ENST00000504842 MS4A1P11836 297 aa9.49□□□□□ -0.89
PROM1-205ENST00000504842 HRO43593 1189 aa9.48□□□□□ -0.89
PROM1-205ENST00000504842 PTPREP23469 700 aa9.48□□□□□ -0.89
PROM1-205ENST00000504842 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
PROM1-205ENST00000504842 CDHR5Q9HBB8 845 aa9.48□□□□□ -0.89
PROM1-205ENST00000504842 GPCPD1Q9NPB8 672 aa9.48□□□□□ -0.89
PROM1-205ENST00000504842 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
PROM1-205ENST00000504842 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
PROM1-205ENST00000504842 PTPN5P54829 565 aa9.46□□□□□ -0.9
PROM1-205ENST00000504842 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
PROM1-205ENST00000504842 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
PROM1-205ENST00000504842 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
PROM1-205ENST00000504842 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
PROM1-205ENST00000504842 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
PROM1-205ENST00000504842 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
PROM1-205ENST00000504842 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
PROM1-205ENST00000504842 PCDHGA10Q9Y5H3 936 aa9.44□□□□□ -0.9
PROM1-205ENST00000504842 NISCHQ9Y2I1 1504 aa9.44□□□□□ -0.9
PROM1-205ENST00000504842 OATP04181 439 aa9.43□□□□□ -0.9
PROM1-205ENST00000504842 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
PROM1-205ENST00000504842 FOSBP53539 338 aa9.43□□□□□ -0.9
PROM1-205ENST00000504842 CERKQ8TCT0 537 aa9.43□□□□□ -0.9
PROM1-205ENST00000504842 TMUB1Q9BVT8 246 aa9.43□□□□□ -0.9
PROM1-205ENST00000504842 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
PROM1-205ENST00000504842 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
PROM1-205ENST00000504842 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
PROM1-205ENST00000504842 ARID3AQ99856 593 aa9.42□□□□□ -0.9
PROM1-205ENST00000504842 UBTFP17480 764 aaKnown RBP9.41□□□□□ -0.9
PROM1-205ENST00000504842 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
PROM1-205ENST00000504842 MRPL50Q8N5N7 158 aaKnown RBP9.41□□□□□ -0.9
PROM1-205ENST00000504842 APBB1O00213 710 aa9.4□□□□□ -0.9
PROM1-205ENST00000504842 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
PROM1-205ENST00000504842 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
PROM1-205ENST00000504842 A6NJR5 290 aa9.38□□□□□ -0.91
PROM1-205ENST00000504842 METTL3Q86U44 580 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms