RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 ARHGAP5Q13017 1502 aa14.12□□□□□ -0.15
CDH6-202ENST00000504835 CDC42BPAQ5VT25 1732 aa14.11□□□□□ -0.15
CDH6-202ENST00000504835 ITSN2Q9NZM3 1697 aa14.11□□□□□ -0.15
CDH6-202ENST00000504835 ATP1B4Q9UN42 357 aaPredicted RBP14.11□□□□□ -0.15
CDH6-202ENST00000504835 STRCQ7RTU9 1775 aa14.11□□□□□ -0.15
CDH6-202ENST00000504835 EFCAB2Q5VUJ9 269 aa14.1□□□□□ -0.15
CDH6-202ENST00000504835 ZNF518AQ6AHZ1 1483 aa14.1□□□□□ -0.15
CDH6-202ENST00000504835 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
CDH6-202ENST00000504835 SETD1BQ9UPS6 1966 aaKnown RBP14.08□□□□□ -0.15
CDH6-202ENST00000504835 C3P01024 1663 aa14.08□□□□□ -0.16
CDH6-202ENST00000504835 ABCC1P33527 1531 aa14.08□□□□□ -0.16
CDH6-202ENST00000504835 KIDINS220Q9ULH0 1771 aa14.07□□□□□ -0.16
CDH6-202ENST00000504835 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
CDH6-202ENST00000504835 AFAP1Q8N556 730 aa14.06□□□□□ -0.16
CDH6-202ENST00000504835 CDK11AQ9UQ88 783 aaPredicted RBP14.06□□□□□ -0.16
CDH6-202ENST00000504835 CLIP1P30622 1438 aa14.06□□□□□ -0.16
CDH6-202ENST00000504835 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
CDH6-202ENST00000504835 CEBPAP49715 358 aaPredicted RBP14.05□□□□□ -0.16
CDH6-202ENST00000504835 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
CDH6-202ENST00000504835 CASKIN1Q8WXD9 1431 aa14.04□□□□□ -0.16
CDH6-202ENST00000504835 TRAPPC8Q9Y2L5 1435 aa14.04□□□□□ -0.16
CDH6-202ENST00000504835 CCDC18Q5T9S5 1454 aa14.03□□□□□ -0.16
CDH6-202ENST00000504835 AGLP35573 1532 aa14.02□□□□□ -0.17
CDH6-202ENST00000504835 SAMD9LQ8IVG5 1584 aa14.01□□□□□ -0.17
CDH6-202ENST00000504835 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
CDH6-202ENST00000504835 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
CDH6-202ENST00000504835 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
CDH6-202ENST00000504835 FYCO1Q9BQS8 1478 aa13.99□□□□□ -0.17
CDH6-202ENST00000504835 SLC39A7Q92504 469 aa13.98□□□□□ -0.17
CDH6-202ENST00000504835 C7P10643 843 aa13.97□□□□□ -0.17
CDH6-202ENST00000504835 MS4A3Q96HJ5 214 aa13.97□□□□□ -0.17
CDH6-202ENST00000504835 METRNQ9UJH8 293 aa13.97□□□□□ -0.17
CDH6-202ENST00000504835 SUPT6HQ7KZ85 1726 aaKnown RBP13.97□□□□□ -0.17
CDH6-202ENST00000504835 MROH2AA6NES4 1674 aa13.97□□□□□ -0.17
CDH6-202ENST00000504835 UHRF1BP1Q6BDS2 1440 aa13.96□□□□□ -0.17
CDH6-202ENST00000504835 SYCP2Q9BX26 1530 aa13.96□□□□□ -0.17
CDH6-202ENST00000504835 POTEMA6NI47 508 aa13.96□□□□□ -0.18
CDH6-202ENST00000504835 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
CDH6-202ENST00000504835 GPATCH8Q9UKJ3 1502 aaKnown RBP13.94□□□□□ -0.18
CDH6-202ENST00000504835 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
CDH6-202ENST00000504835 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
CDH6-202ENST00000504835 MAMSTRQ6ZN01 415 aa13.93□□□□□ -0.18
CDH6-202ENST00000504835 CLTCQ00610 1675 aaKnown RBP13.93□□□□□ -0.18
CDH6-202ENST00000504835 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
CDH6-202ENST00000504835 ATP7AQ04656 1500 aa13.91□□□□□ -0.18
CDH6-202ENST00000504835 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
CDH6-202ENST00000504835 LTBP4Q8N2S1 1624 aa13.9□□□□□ -0.18
CDH6-202ENST00000504835 PTPRTO14522 1441 aa13.89□□□□□ -0.19
CDH6-202ENST00000504835 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
CDH6-202ENST00000504835 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
CDH6-202ENST00000504835 CNTLNQ9NXG0 1405 aa13.89□□□□□ -0.19
CDH6-202ENST00000504835 ZNF777Q9ULD5 760 aaPredicted RBP13.88□□□□□ -0.19
CDH6-202ENST00000504835 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
CDH6-202ENST00000504835 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
CDH6-202ENST00000504835 MYO3AQ8NEV4 1616 aa13.88□□□□□ -0.19
CDH6-202ENST00000504835 NCOA1Q15788 1441 aa13.88□□□□□ -0.19
CDH6-202ENST00000504835 HNRNPMP52272 730 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDH6-202ENST00000504835 CAMSAP1Q5T5Y3 1602 aa13.87□□□□□ -0.19
CDH6-202ENST00000504835 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
CDH6-202ENST00000504835 NPATQ14207 1427 aa13.86□□□□□ -0.19
CDH6-202ENST00000504835 PCDH10Q9P2E7 1040 aa13.85□□□□□ -0.19
CDH6-202ENST00000504835 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
CDH6-202ENST00000504835 A2MP01023 1474 aa13.85□□□□□ -0.19
CDH6-202ENST00000504835 ESF1Q9H501 851 aaKnown RBP13.84□□□□□ -0.19
CDH6-202ENST00000504835 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
CDH6-202ENST00000504835 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
CDH6-202ENST00000504835 PLEKHG5O94827 1062 aa13.83□□□□□ -0.19
CDH6-202ENST00000504835 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.19
CDH6-202ENST00000504835 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
CDH6-202ENST00000504835 PROM2Q8N271 834 aa13.83□□□□□ -0.2
CDH6-202ENST00000504835 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
CDH6-202ENST00000504835 SCUBE2Q9NQ36 999 aa13.82□□□□□ -0.2
CDH6-202ENST00000504835 CEP170BQ9Y4F5 1589 aaPredicted RBP13.81□□□□□ -0.2
CDH6-202ENST00000504835 MBD5Q9P267 1494 aa13.81□□□□□ -0.2
CDH6-202ENST00000504835 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
CDH6-202ENST00000504835 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
CDH6-202ENST00000504835 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
CDH6-202ENST00000504835 ZNF644Q9H582 1327 aaPredicted RBP13.8□□□□□ -0.2
CDH6-202ENST00000504835 IQSEC2Q5JU85 1478 aa13.8□□□□□ -0.2
CDH6-202ENST00000504835 ATN1P54259 1190 aaPredicted RBP13.78□□□□□ -0.2
CDH6-202ENST00000504835 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
CDH6-202ENST00000504835 NCKAP5LQ9HCH0 1330 aa13.77□□□□□ -0.2
CDH6-202ENST00000504835 PLA2R1Q13018 1463 aa13.77□□□□□ -0.2
CDH6-202ENST00000504835 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.2
CDH6-202ENST00000504835 DNMT1P26358 1616 aaKnown RBP13.77□□□□□ -0.21
CDH6-202ENST00000504835 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
CDH6-202ENST00000504835 CEP162Q5TB80 1403 aa13.77□□□□□ -0.21
CDH6-202ENST00000504835 POLR1AO95602 1720 aaPredicted RBP13.77□□□□□ -0.21
CDH6-202ENST00000504835 SPATA31D1Q6ZQQ2 1576 aa13.76□□□□□ -0.21
CDH6-202ENST00000504835 ILDR2Q71H61 639 aa13.76□□□□□ -0.21
CDH6-202ENST00000504835 GGT6Q6P531 493 aa13.75□□□□□ -0.21
CDH6-202ENST00000504835 RTEL1-TNFRSF6BF6WH68 1400 aa13.75□□□□□ -0.21
CDH6-202ENST00000504835 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
CDH6-202ENST00000504835 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
CDH6-202ENST00000504835 CAMSAP2Q08AD1 1489 aa13.73□□□□□ -0.21
CDH6-202ENST00000504835 NEURL4Q96JN8 1562 aa13.72□□□□□ -0.21
CDH6-202ENST00000504835 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
CDH6-202ENST00000504835 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
CDH6-202ENST00000504835 CCDC141Q6ZP82 1450 aa13.72□□□□□ -0.21
CDH6-202ENST00000504835 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms