RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 HFM1A2PYH4 1435 aa19.93■□□□□ 0.78
PDLIM7-212ENST00000504380 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-212ENST00000504380 PTPRMP28827 1452 aa19.92■□□□□ 0.78
PDLIM7-212ENST00000504380 ADAMTSL3P82987 1691 aa19.9■□□□□ 0.78
PDLIM7-212ENST00000504380 MROH1Q8NDA8 1641 aa19.88■□□□□ 0.77
PDLIM7-212ENST00000504380 MADDQ8WXG6 1647 aa19.88■□□□□ 0.77
PDLIM7-212ENST00000504380 RNF17Q9BXT8 1623 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-212ENST00000504380 PLPPR3Q6T4P5 718 aa19.88■□□□□ 0.77
PDLIM7-212ENST00000504380 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
PDLIM7-212ENST00000504380 FER1L4A9Z1Z3 1794 aa19.86■□□□□ 0.77
PDLIM7-212ENST00000504380 RIMS1Q86UR5 1692 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-212ENST00000504380 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
PDLIM7-212ENST00000504380 ESF1Q9H501 851 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-212ENST00000504380 LMTK3Q96Q04 1460 aa19.85■□□□□ 0.77
PDLIM7-212ENST00000504380 DEPDC5O75140 1603 aa19.84■□□□□ 0.77
PDLIM7-212ENST00000504380 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-212ENST00000504380 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
PDLIM7-212ENST00000504380 WASHC2CQ9Y4E1 1318 aa19.83■□□□□ 0.77
PDLIM7-212ENST00000504380 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
PDLIM7-212ENST00000504380 CEBPAP49715 358 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-212ENST00000504380 UNC13BO14795 1591 aa19.82■□□□□ 0.76
PDLIM7-212ENST00000504380 CEP152O94986 1710 aa19.82■□□□□ 0.76
PDLIM7-212ENST00000504380 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-212ENST00000504380 NUP155O75694 1391 aa19.81■□□□□ 0.76
PDLIM7-212ENST00000504380 PPP6R1Q9UPN7 881 aa19.8■□□□□ 0.76
PDLIM7-212ENST00000504380 ABCC3O15438 1527 aa19.8■□□□□ 0.76
PDLIM7-212ENST00000504380 KANK1Q14678 1352 aa19.8■□□□□ 0.76
PDLIM7-212ENST00000504380 KDM5DQ9BY66 1539 aa19.79■□□□□ 0.76
PDLIM7-212ENST00000504380 VWDEQ8N2E2 1590 aa19.78■□□□□ 0.76
PDLIM7-212ENST00000504380 ZMYM3Q14202 1370 aa19.77■□□□□ 0.76
PDLIM7-212ENST00000504380 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
PDLIM7-212ENST00000504380 CERKQ8TCT0 537 aa19.74■□□□□ 0.75
PDLIM7-212ENST00000504380 C3P01024 1663 aa19.74■□□□□ 0.75
PDLIM7-212ENST00000504380 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
PDLIM7-212ENST00000504380 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
PDLIM7-212ENST00000504380 FAM135AQ9P2D6 1515 aa19.73■□□□□ 0.75
PDLIM7-212ENST00000504380 ZC3H13Q5T200 1668 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-212ENST00000504380 SOCS7O14512 581 aa19.73■□□□□ 0.75
PDLIM7-212ENST00000504380 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-212ENST00000504380 MROH2AA6NES4 1674 aa19.72■□□□□ 0.75
PDLIM7-212ENST00000504380 CFAP65Q6ZU64 1925 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-212ENST00000504380 PZPP20742 1482 aa19.72■□□□□ 0.75
PDLIM7-212ENST00000504380 LMTK2Q8IWU2 1503 aa19.71■□□□□ 0.75
PDLIM7-212ENST00000504380 ILDR2Q71H61 639 aa19.7■□□□□ 0.74
PDLIM7-212ENST00000504380 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-212ENST00000504380 TET3O43151 1660 aa19.68■□□□□ 0.74
PDLIM7-212ENST00000504380 HRCP23327 699 aa19.68■□□□□ 0.74
PDLIM7-212ENST00000504380 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
PDLIM7-212ENST00000504380 NPATQ14207 1427 aa19.68■□□□□ 0.74
PDLIM7-212ENST00000504380 EFCAB6Q5THR3 1501 aa19.67■□□□□ 0.74
PDLIM7-212ENST00000504380 HSPA2P54652 639 aa19.67■□□□□ 0.74
PDLIM7-212ENST00000504380 PKD2Q13563 968 aa19.67■□□□□ 0.74
PDLIM7-212ENST00000504380 FOXD1Q16676 465 aa19.67■□□□□ 0.74
PDLIM7-212ENST00000504380 E9PCH4 1651 aa19.66■□□□□ 0.74
PDLIM7-212ENST00000504380 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.73
PDLIM7-212ENST00000504380 ERVK-7P63135 1459 aa19.62■□□□□ 0.73
PDLIM7-212ENST00000504380 PREX1Q8TCU6 1659 aa19.62■□□□□ 0.73
PDLIM7-212ENST00000504380 DISP3Q9P2K9 1392 aa19.61■□□□□ 0.73
PDLIM7-212ENST00000504380 TNRQ92752 1358 aa19.6■□□□□ 0.73
PDLIM7-212ENST00000504380 ACIN1Q9UKV3 1341 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-212ENST00000504380 SPATA31D1Q6ZQQ2 1576 aa19.58■□□□□ 0.73
PDLIM7-212ENST00000504380 RPRD2Q5VT52 1461 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-212ENST00000504380 NOS1P29475 1434 aa19.57■□□□□ 0.72
PDLIM7-212ENST00000504380 SYNMO15061 1565 aa19.57■□□□□ 0.72
PDLIM7-212ENST00000504380 UGGT1Q9NYU2 1555 aa19.55■□□□□ 0.72
PDLIM7-212ENST00000504380 PLA2R1Q13018 1463 aa19.54■□□□□ 0.72
PDLIM7-212ENST00000504380 SPHKAPQ2M3C7 1700 aa19.54■□□□□ 0.72
PDLIM7-212ENST00000504380 MYO3AQ8NEV4 1616 aa19.53■□□□□ 0.72
PDLIM7-212ENST00000504380 SETD1BQ9UPS6 1966 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-212ENST00000504380 PTPRTO14522 1441 aa19.52■□□□□ 0.72
PDLIM7-212ENST00000504380 IDI1Q13907 227 aa19.52■□□□□ 0.72
PDLIM7-212ENST00000504380 DHX57Q6P158 1386 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-212ENST00000504380 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
PDLIM7-212ENST00000504380 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-212ENST00000504380 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
PDLIM7-212ENST00000504380 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
PDLIM7-212ENST00000504380 CLTCL1P53675 1640 aa19.47■□□□□ 0.71
PDLIM7-212ENST00000504380 TRPM2O94759 1503 aa19.47■□□□□ 0.71
PDLIM7-212ENST00000504380 NLRP1Q9C000 1473 aa19.47■□□□□ 0.71
PDLIM7-212ENST00000504380 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
PDLIM7-212ENST00000504380 CEP170BQ9Y4F5 1589 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-212ENST00000504380 SLC52A1Q9NWF4 448 aa19.46■□□□□ 0.71
PDLIM7-212ENST00000504380 A2ML1A8K2U0 1454 aa19.46■□□□□ 0.71
PDLIM7-212ENST00000504380 STAG3Q9UJ98 1225 aa19.45■□□□□ 0.7
PDLIM7-212ENST00000504380 ZNF142P52746 1687 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-212ENST00000504380 UBR1Q8IWV7 1749 aa19.42■□□□□ 0.7
PDLIM7-212ENST00000504380 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
PDLIM7-212ENST00000504380 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
PDLIM7-212ENST00000504380 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
PDLIM7-212ENST00000504380 ADGRB3O60242 1522 aa19.4■□□□□ 0.7
PDLIM7-212ENST00000504380 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
PDLIM7-212ENST00000504380 THEMISQ8N1K5 641 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-212ENST00000504380 KIF1BO60333 1816 aa19.37■□□□□ 0.69
PDLIM7-212ENST00000504380 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
PDLIM7-212ENST00000504380 RGL3Q3MIN7 710 aa19.37■□□□□ 0.69
PDLIM7-212ENST00000504380 ZNF326Q5BKZ1 582 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-212ENST00000504380 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-212ENST00000504380 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-212ENST00000504380 NCKAP5LQ9HCH0 1330 aa19.35■□□□□ 0.69
PDLIM7-212ENST00000504380 CCER1Q8TC90 406 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms