RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
ARHGEF28-206ENST00000504003 MAP3K4Q9Y6R4 1608 aa13.86□□□□□ -0.19
ARHGEF28-206ENST00000504003 FANCAO15360 1455 aa13.85□□□□□ -0.19
ARHGEF28-206ENST00000504003 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
ARHGEF28-206ENST00000504003 TEX14Q8IWB6 1497 aa13.85□□□□□ -0.19
ARHGEF28-206ENST00000504003 FKBP8Q14318 412 aa13.84□□□□□ -0.19
ARHGEF28-206ENST00000504003 TSPY4P0CV99 314 aa13.82□□□□□ -0.2
ARHGEF28-206ENST00000504003 TSPY10P0CW01 314 aa13.82□□□□□ -0.2
ARHGEF28-206ENST00000504003 ITGAEP38570 1179 aa13.82□□□□□ -0.2
ARHGEF28-206ENST00000504003 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
ARHGEF28-206ENST00000504003 NEO1Q92859 1461 aa13.81□□□□□ -0.2
ARHGEF28-206ENST00000504003 KIF13AQ9H1H9 1805 aa13.81□□□□□ -0.2
ARHGEF28-206ENST00000504003 ASTLQ6HA08 431 aaPredicted RBP13.81□□□□□ -0.2
ARHGEF28-206ENST00000504003 SAMD9LQ8IVG5 1584 aa13.8□□□□□ -0.2
ARHGEF28-206ENST00000504003 DNMT1P26358 1616 aaKnown RBP13.79□□□□□ -0.2
ARHGEF28-206ENST00000504003 AKNAQ7Z591 1439 aa13.79□□□□□ -0.2
ARHGEF28-206ENST00000504003 ADGRL1O94910 1474 aa13.79□□□□□ -0.2
ARHGEF28-206ENST00000504003 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
ARHGEF28-206ENST00000504003 TSPOAP1O95153 1857 aa13.78□□□□□ -0.2
ARHGEF28-206ENST00000504003 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF28-206ENST00000504003 ABCC1P33527 1531 aa13.77□□□□□ -0.21
ARHGEF28-206ENST00000504003 DAPK1P53355 1430 aa13.77□□□□□ -0.21
ARHGEF28-206ENST00000504003 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.21
ARHGEF28-206ENST00000504003 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
ARHGEF28-206ENST00000504003 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
ARHGEF28-206ENST00000504003 SYCP2Q9BX26 1530 aa13.76□□□□□ -0.21
ARHGEF28-206ENST00000504003 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF28-206ENST00000504003 HNRNPMP52272 730 aaKnown RBP eCLIP13.76□□□□□ -0.21
ARHGEF28-206ENST00000504003 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
ARHGEF28-206ENST00000504003 SCAPERQ9BY12 1400 aa13.75□□□□□ -0.21
ARHGEF28-206ENST00000504003 ACIN1Q9UKV3 1341 aaKnown RBP13.75□□□□□ -0.21
ARHGEF28-206ENST00000504003 METRNQ9UJH8 293 aa13.75□□□□□ -0.21
ARHGEF28-206ENST00000504003 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
ARHGEF28-206ENST00000504003 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
ARHGEF28-206ENST00000504003 C7P10643 843 aa13.74□□□□□ -0.21
ARHGEF28-206ENST00000504003 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
ARHGEF28-206ENST00000504003 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
ARHGEF28-206ENST00000504003 ABCC5O15440 1437 aa13.73□□□□□ -0.21
ARHGEF28-206ENST00000504003 ADGBQ8N7X0 1667 aa13.73□□□□□ -0.21
ARHGEF28-206ENST00000504003 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
ARHGEF28-206ENST00000504003 MBD5Q9P267 1494 aa13.73□□□□□ -0.21
ARHGEF28-206ENST00000504003 ROCK1Q13464 1354 aa13.72□□□□□ -0.21
ARHGEF28-206ENST00000504003 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
ARHGEF28-206ENST00000504003 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF28-206ENST00000504003 CHIC2Q9UKJ5 165 aa13.71□□□□□ -0.21
ARHGEF28-206ENST00000504003 C9orf84Q5VXU9 1444 aa13.71□□□□□ -0.22
ARHGEF28-206ENST00000504003 SPAG9O60271 1321 aaKnown RBP13.7□□□□□ -0.22
ARHGEF28-206ENST00000504003 PPRC1Q5VV67 1664 aaKnown RBP13.7□□□□□ -0.22
ARHGEF28-206ENST00000504003 MAST1Q9Y2H9 1570 aa13.7□□□□□ -0.22
ARHGEF28-206ENST00000504003 RTEL1-TNFRSF6BF6WH68 1400 aa13.69□□□□□ -0.22
ARHGEF28-206ENST00000504003 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
ARHGEF28-206ENST00000504003 MAP3K13O43283 966 aa13.68□□□□□ -0.22
ARHGEF28-206ENST00000504003 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
ARHGEF28-206ENST00000504003 ARHGEF12Q9NZN5 1544 aa13.68□□□□□ -0.22
ARHGEF28-206ENST00000504003 ADGRL2O95490 1459 aa13.67□□□□□ -0.22
ARHGEF28-206ENST00000504003 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
ARHGEF28-206ENST00000504003 TRAPPC8Q9Y2L5 1435 aa13.67□□□□□ -0.22
ARHGEF28-206ENST00000504003 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
ARHGEF28-206ENST00000504003 HFM1A2PYH4 1435 aa13.66□□□□□ -0.22
ARHGEF28-206ENST00000504003 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
ARHGEF28-206ENST00000504003 TIE1P35590 1138 aa13.66□□□□□ -0.22
ARHGEF28-206ENST00000504003 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
ARHGEF28-206ENST00000504003 FAM212AQ96EL1 285 aa13.66□□□□□ -0.22
ARHGEF28-206ENST00000504003 PTPRKQ15262 1439 aa13.65□□□□□ -0.22
ARHGEF28-206ENST00000504003 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
ARHGEF28-206ENST00000504003 HRCP23327 699 aa13.65□□□□□ -0.22
ARHGEF28-206ENST00000504003 ATN1P54259 1190 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF28-206ENST00000504003 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
ARHGEF28-206ENST00000504003 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
ARHGEF28-206ENST00000504003 GCC2Q8IWJ2 1684 aa13.65□□□□□ -0.22
ARHGEF28-206ENST00000504003 ATP7AQ04656 1500 aa13.64□□□□□ -0.23
ARHGEF28-206ENST00000504003 KDM5CP41229 1560 aa13.64□□□□□ -0.23
ARHGEF28-206ENST00000504003 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
ARHGEF28-206ENST00000504003 ILDR1Q86SU0 546 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF28-206ENST00000504003 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
ARHGEF28-206ENST00000504003 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
ARHGEF28-206ENST00000504003 MAGI2Q86UL8 1455 aa13.63□□□□□ -0.23
ARHGEF28-206ENST00000504003 MLH3Q9UHC1 1453 aa13.63□□□□□ -0.23
ARHGEF28-206ENST00000504003 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
ARHGEF28-206ENST00000504003 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF28-206ENST00000504003 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF28-206ENST00000504003 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
ARHGEF28-206ENST00000504003 NUBP1P53384 320 aa13.62□□□□□ -0.23
ARHGEF28-206ENST00000504003 MAMSTRQ6ZN01 415 aa13.62□□□□□ -0.23
ARHGEF28-206ENST00000504003 ZFYVE16Q7Z3T8 1539 aa13.62□□□□□ -0.23
ARHGEF28-206ENST00000504003 DUOX2Q9NRD8 1548 aa13.62□□□□□ -0.23
ARHGEF28-206ENST00000504003 NAIPQ13075 1403 aa13.62□□□□□ -0.23
ARHGEF28-206ENST00000504003 KDM6BO15054 1643 aa13.61□□□□□ -0.23
ARHGEF28-206ENST00000504003 RAB3GAP2Q9H2M9 1393 aa13.6□□□□□ -0.23
ARHGEF28-206ENST00000504003 ZMYM4Q5VZL5 1548 aa13.6□□□□□ -0.23
ARHGEF28-206ENST00000504003 ANKRD50Q9ULJ7 1429 aa13.6□□□□□ -0.23
ARHGEF28-206ENST00000504003 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
ARHGEF28-206ENST00000504003 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.23
ARHGEF28-206ENST00000504003 ERBINQ96RT1 1412 aa13.58□□□□□ -0.24
ARHGEF28-206ENST00000504003 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
ARHGEF28-206ENST00000504003 TRIM52Q96A61 297 aa13.56□□□□□ -0.24
ARHGEF28-206ENST00000504003 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
ARHGEF28-206ENST00000504003 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
ARHGEF28-206ENST00000504003 EIF2AK4Q9P2K8 1649 aaKnown RBP13.55□□□□□ -0.24
ARHGEF28-206ENST00000504003 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms