RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 POLR1AO95602 1720 aaPredicted RBP25.54■■□□□ 1.68
DDR1-250ENST00000503628 TNRQ92752 1358 aa25.53■■□□□ 1.68
DDR1-250ENST00000503628 RTEL1-TNFRSF6BF6WH68 1400 aa25.53■■□□□ 1.68
DDR1-250ENST00000503628 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
DDR1-250ENST00000503628 CPS1P31327 1500 aa25.53■■□□□ 1.68
DDR1-250ENST00000503628 TIAM1Q13009 1591 aa25.52■■□□□ 1.68
DDR1-250ENST00000503628 MED1Q15648 1581 aaPredicted RBP25.52■■□□□ 1.68
DDR1-250ENST00000503628 NEURL4Q96JN8 1562 aa25.52■■□□□ 1.68
DDR1-250ENST00000503628 KIF3BO15066 747 aa25.52■■□□□ 1.68
DDR1-250ENST00000503628 ANKLE2Q86XL3 938 aa25.48■■□□□ 1.67
DDR1-250ENST00000503628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.47■■□□□ 1.67
DDR1-250ENST00000503628 PZPP20742 1482 aa25.47■■□□□ 1.67
DDR1-250ENST00000503628 WASHC2CQ9Y4E1 1318 aa25.45■■□□□ 1.66
DDR1-250ENST00000503628 THEMISQ8N1K5 641 aaPredicted RBP25.45■■□□□ 1.66
DDR1-250ENST00000503628 KDM5DQ9BY66 1539 aa25.44■■□□□ 1.66
DDR1-250ENST00000503628 VWDEQ8N2E2 1590 aa25.43■■□□□ 1.66
DDR1-250ENST00000503628 EHBP1L1Q8N3D4 1523 aa25.42■■□□□ 1.66
DDR1-250ENST00000503628 CEP162Q5TB80 1403 aa25.41■■□□□ 1.66
DDR1-250ENST00000503628 MIA2Q96PC5 1412 aa25.41■■□□□ 1.66
DDR1-250ENST00000503628 FAM135AQ9P2D6 1515 aa25.39■■□□□ 1.66
DDR1-250ENST00000503628 CCDC141Q6ZP82 1450 aa25.39■■□□□ 1.65
DDR1-250ENST00000503628 UGGT1Q9NYU2 1555 aa25.39■■□□□ 1.65
DDR1-250ENST00000503628 NPHP4O75161 1426 aaPredicted RBP25.38■■□□□ 1.65
DDR1-250ENST00000503628 NLRP1Q9C000 1473 aa25.38■■□□□ 1.65
DDR1-250ENST00000503628 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
DDR1-250ENST00000503628 MED14O60244 1454 aa25.37■■□□□ 1.65
DDR1-250ENST00000503628 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
DDR1-250ENST00000503628 RSPH4AQ5TD94 716 aa25.36■■□□□ 1.65
DDR1-250ENST00000503628 DEPDC5O75140 1603 aa25.36■■□□□ 1.65
DDR1-250ENST00000503628 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
DDR1-250ENST00000503628 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
DDR1-250ENST00000503628 IQGAP1P46940 1657 aa25.32■■□□□ 1.64
DDR1-250ENST00000503628 STRCP1A6NGW2 1772 aa25.31■■□□□ 1.64
DDR1-250ENST00000503628 NCOA2Q15596 1464 aa25.3■■□□□ 1.64
DDR1-250ENST00000503628 TSPY4P0CV99 314 aa25.29■■□□□ 1.64
DDR1-250ENST00000503628 TSPY10P0CW01 314 aa25.29■■□□□ 1.64
DDR1-250ENST00000503628 LRRC7Q96NW7 1537 aa25.27■■□□□ 1.64
DDR1-250ENST00000503628 ARHGEF5Q12774 1597 aa25.25■■□□□ 1.63
DDR1-250ENST00000503628 ABCC3O15438 1527 aa25.22■■□□□ 1.63
DDR1-250ENST00000503628 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
DDR1-250ENST00000503628 RNF17Q9BXT8 1623 aaKnown RBP25.22■■□□□ 1.63
DDR1-250ENST00000503628 ERVK-7P63135 1459 aa25.2■■□□□ 1.62
DDR1-250ENST00000503628 SYNMO15061 1565 aa25.19■■□□□ 1.62
DDR1-250ENST00000503628 ZC3H13Q5T200 1668 aaKnown RBP25.19■■□□□ 1.62
DDR1-250ENST00000503628 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
DDR1-250ENST00000503628 LTKP29376 864 aa25.14■■□□□ 1.62
DDR1-250ENST00000503628 RGS17Q9UGC6 210 aaPredicted RBP25.14■■□□□ 1.62
DDR1-250ENST00000503628 MAST1Q9Y2H9 1570 aa25.14■■□□□ 1.61
DDR1-250ENST00000503628 CEP152O94986 1710 aa25.13■■□□□ 1.61
DDR1-250ENST00000503628 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
DDR1-250ENST00000503628 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
DDR1-250ENST00000503628 EIF2AK4Q9P2K8 1649 aaKnown RBP25.12■■□□□ 1.61
DDR1-250ENST00000503628 TXNDC2Q86VQ3 553 aa25.12■■□□□ 1.61
DDR1-250ENST00000503628 XIRP1Q702N8 1843 aaKnown RBP25.1■■□□□ 1.61
DDR1-250ENST00000503628 ARHGAP23Q9P227 1491 aa25.07■■□□□ 1.6
DDR1-250ENST00000503628 SLIT1O75093 1534 aa25.07■■□□□ 1.6
DDR1-250ENST00000503628 LRRC9Q6ZRR7 1453 aa25.05■■□□□ 1.6
DDR1-250ENST00000503628 EID1Q9Y6B2 187 aa25.05■■□□□ 1.6
DDR1-250ENST00000503628 DUOX2Q9NRD8 1548 aa25.02■■□□□ 1.6
DDR1-250ENST00000503628 ARHGAP31Q2M1Z3 1444 aa25■■□□□ 1.59
DDR1-250ENST00000503628 FAM135BQ49AJ0 1406 aa25■■□□□ 1.59
DDR1-250ENST00000503628 KANK4Q5T7N3 995 aaPredicted RBP24.99■■□□□ 1.59
DDR1-250ENST00000503628 MYOM3Q5VTT5 1437 aa24.98■■□□□ 1.59
DDR1-250ENST00000503628 POTEAQ6S8J7 498 aa24.98■■□□□ 1.59
DDR1-250ENST00000503628 PIK3C2BO00750 1634 aa24.97■■□□□ 1.59
DDR1-250ENST00000503628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.97■■□□□ 1.59
DDR1-250ENST00000503628 TMEM2Q9UHN6 1383 aa24.96■■□□□ 1.59
DDR1-250ENST00000503628 STAG3Q9UJ98 1225 aa24.96■■□□□ 1.59
DDR1-250ENST00000503628 TMEM94Q12767 1356 aa24.95■■□□□ 1.59
DDR1-250ENST00000503628 KIF15Q9NS87 1388 aa24.95■■□□□ 1.59
DDR1-250ENST00000503628 RRP7BPQ9NSQ0 103 aa24.95■■□□□ 1.58
DDR1-250ENST00000503628 PRDM15P57071 1507 aaPredicted RBP24.95■■□□□ 1.58
DDR1-250ENST00000503628 VPS8Q8N3P4 1428 aa24.94■■□□□ 1.58
DDR1-250ENST00000503628 KCNA6P17658 529 aa24.93■■□□□ 1.58
DDR1-250ENST00000503628 RBM33Q96EV2 1170 aaKnown RBP24.93■■□□□ 1.58
DDR1-250ENST00000503628 IDI1Q13907 227 aa24.91■■□□□ 1.58
DDR1-250ENST00000503628 PROSER2Q86WR7 435 aaPredicted RBP24.91■■□□□ 1.58
DDR1-250ENST00000503628 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
DDR1-250ENST00000503628 ROBO1Q9Y6N7 1651 aa24.91■■□□□ 1.58
DDR1-250ENST00000503628 ERBINQ96RT1 1412 aa24.9■■□□□ 1.58
DDR1-250ENST00000503628 ABCC5O15440 1437 aa24.88■■□□□ 1.57
DDR1-250ENST00000503628 EFCAB6Q5THR3 1501 aa24.88■■□□□ 1.57
DDR1-250ENST00000503628 KANK1Q14678 1352 aa24.87■■□□□ 1.57
DDR1-250ENST00000503628 TET3O43151 1660 aa24.87■■□□□ 1.57
DDR1-250ENST00000503628 KDM5AP29375 1690 aaKnown RBP24.87■■□□□ 1.57
DDR1-250ENST00000503628 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
DDR1-250ENST00000503628 CROCC2H7BZ55 1655 aa24.85■■□□□ 1.57
DDR1-250ENST00000503628 LOC105371045A0A1W2PR82 267 aa24.81■■□□□ 1.56
DDR1-250ENST00000503628 PTPN23Q9H3S7 1636 aa24.8■■□□□ 1.56
DDR1-250ENST00000503628 BCANQ96GW7 911 aa24.8■■□□□ 1.56
DDR1-250ENST00000503628 SLAIN2Q9P270 581 aa24.79■■□□□ 1.56
DDR1-250ENST00000503628 LMTK2Q8IWU2 1503 aa24.79■■□□□ 1.56
DDR1-250ENST00000503628 DAPK1P53355 1430 aa24.78■■□□□ 1.56
DDR1-250ENST00000503628 CHIC2Q9UKJ5 165 aa24.78■■□□□ 1.56
DDR1-250ENST00000503628 MSH6P52701 1360 aa24.78■■□□□ 1.56
DDR1-250ENST00000503628 NKTRP30414 1462 aaKnown RBP24.77■■□□□ 1.56
DDR1-250ENST00000503628 NWD1Q149M9 1564 aa24.77■■□□□ 1.56
DDR1-250ENST00000503628 PHLPP1O60346 1717 aa24.77■■□□□ 1.56
DDR1-250ENST00000503628 SETD1AO15047 1707 aaKnown RBP24.76■■□□□ 1.55
DDR1-250ENST00000503628 NOS1P29475 1434 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms