RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 RNF17Q9BXT8 1623 aaKnown RBP24.98■■□□□ 1.59
SCLT1-205ENST00000503401 ANKRD50Q9ULJ7 1429 aa24.98■■□□□ 1.59
SCLT1-205ENST00000503401 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
SCLT1-205ENST00000503401 CLTCQ00610 1675 aaKnown RBP24.97■■□□□ 1.59
SCLT1-205ENST00000503401 MROH1Q8NDA8 1641 aa24.95■■□□□ 1.58
SCLT1-205ENST00000503401 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
SCLT1-205ENST00000503401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.58
SCLT1-205ENST00000503401 DEPDC5O75140 1603 aa24.91■■□□□ 1.58
SCLT1-205ENST00000503401 C3P01024 1663 aa24.91■■□□□ 1.58
SCLT1-205ENST00000503401 CNTLNQ9NXG0 1405 aa24.9■■□□□ 1.58
SCLT1-205ENST00000503401 WASHC2CQ9Y4E1 1318 aa24.9■■□□□ 1.58
SCLT1-205ENST00000503401 PPP6R1Q9UPN7 881 aa24.9■■□□□ 1.58
SCLT1-205ENST00000503401 NAIPQ13075 1403 aa24.89■■□□□ 1.58
SCLT1-205ENST00000503401 KDM5DQ9BY66 1539 aa24.89■■□□□ 1.57
SCLT1-205ENST00000503401 GCC2Q8IWJ2 1684 aa24.89■■□□□ 1.57
SCLT1-205ENST00000503401 CEP152O94986 1710 aa24.88■■□□□ 1.57
SCLT1-205ENST00000503401 PRDM15P57071 1507 aaPredicted RBP24.88■■□□□ 1.57
SCLT1-205ENST00000503401 MROH2AA6NES4 1674 aa24.88■■□□□ 1.57
SCLT1-205ENST00000503401 ZMYM3Q14202 1370 aa24.87■■□□□ 1.57
SCLT1-205ENST00000503401 ABCC3O15438 1527 aa24.86■■□□□ 1.57
SCLT1-205ENST00000503401 HFM1A2PYH4 1435 aa24.85■■□□□ 1.57
SCLT1-205ENST00000503401 ZC3H13Q5T200 1668 aaKnown RBP24.83■■□□□ 1.57
SCLT1-205ENST00000503401 FAM135AQ9P2D6 1515 aa24.83■■□□□ 1.57
SCLT1-205ENST00000503401 UNC13BO14795 1591 aa24.82■■□□□ 1.56
SCLT1-205ENST00000503401 KANK1Q14678 1352 aa24.81■■□□□ 1.56
SCLT1-205ENST00000503401 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
SCLT1-205ENST00000503401 VWDEQ8N2E2 1590 aa24.79■■□□□ 1.56
SCLT1-205ENST00000503401 CFAP65Q6ZU64 1925 aaKnown RBP24.79■■□□□ 1.56
SCLT1-205ENST00000503401 FBXO31Q5XUX0 539 aaPredicted RBP24.75■■□□□ 1.55
SCLT1-205ENST00000503401 PZPP20742 1482 aa24.74■■□□□ 1.55
SCLT1-205ENST00000503401 NUP155O75694 1391 aa24.74■■□□□ 1.55
SCLT1-205ENST00000503401 SETD1BQ9UPS6 1966 aaKnown RBP24.73■■□□□ 1.55
SCLT1-205ENST00000503401 LMTK2Q8IWU2 1503 aa24.72■■□□□ 1.55
SCLT1-205ENST00000503401 IQGAP3Q86VI3 1631 aa24.72■■□□□ 1.55
SCLT1-205ENST00000503401 SETD5Q9C0A6 1442 aa24.7■■□□□ 1.54
SCLT1-205ENST00000503401 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
SCLT1-205ENST00000503401 NPATQ14207 1427 aa24.69■■□□□ 1.54
SCLT1-205ENST00000503401 TET3O43151 1660 aa24.68■■□□□ 1.54
SCLT1-205ENST00000503401 PREX1Q8TCU6 1659 aa24.68■■□□□ 1.54
SCLT1-205ENST00000503401 TRIM52Q96A61 297 aa24.68■■□□□ 1.54
SCLT1-205ENST00000503401 ARHGAP31Q2M1Z3 1444 aa24.66■■□□□ 1.54
SCLT1-205ENST00000503401 RAB3GAP2Q9H2M9 1393 aa24.65■■□□□ 1.54
SCLT1-205ENST00000503401 ERVK-7P63135 1459 aa24.65■■□□□ 1.54
SCLT1-205ENST00000503401 LMTK3Q96Q04 1460 aa24.65■■□□□ 1.54
SCLT1-205ENST00000503401 MYO3AQ8NEV4 1616 aa24.64■■□□□ 1.53
SCLT1-205ENST00000503401 E9PCH4 1651 aa24.64■■□□□ 1.53
SCLT1-205ENST00000503401 TNRQ92752 1358 aa24.63■■□□□ 1.53
SCLT1-205ENST00000503401 SPATA31D1Q6ZQQ2 1576 aa24.63■■□□□ 1.53
SCLT1-205ENST00000503401 TRIM26Q12899 539 aaPredicted RBP24.63■■□□□ 1.53
SCLT1-205ENST00000503401 UHRF1BP1Q6BDS2 1440 aa24.63■■□□□ 1.53
SCLT1-205ENST00000503401 HSPA2P54652 639 aa24.59■■□□□ 1.53
SCLT1-205ENST00000503401 RPRD2Q5VT52 1461 aaKnown RBP24.57■■□□□ 1.52
SCLT1-205ENST00000503401 SYNMO15061 1565 aa24.56■■□□□ 1.52
SCLT1-205ENST00000503401 CEP170BQ9Y4F5 1589 aaPredicted RBP24.56■■□□□ 1.52
SCLT1-205ENST00000503401 SLC4A1APQ9BWU0 796 aaKnown RBP24.55■■□□□ 1.52
SCLT1-205ENST00000503401 ZNF142P52746 1687 aaPredicted RBP24.55■■□□□ 1.52
SCLT1-205ENST00000503401 NOS1P29475 1434 aa24.54■■□□□ 1.52
SCLT1-205ENST00000503401 PKD2Q13563 968 aa24.52■■□□□ 1.52
SCLT1-205ENST00000503401 A2ML1A8K2U0 1454 aa24.51■■□□□ 1.51
SCLT1-205ENST00000503401 NLRP1Q9C000 1473 aa24.51■■□□□ 1.51
SCLT1-205ENST00000503401 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
SCLT1-205ENST00000503401 SPHKAPQ2M3C7 1700 aa24.49■■□□□ 1.51
SCLT1-205ENST00000503401 FOXD1Q16676 465 aa24.49■■□□□ 1.51
SCLT1-205ENST00000503401 UGGT1Q9NYU2 1555 aa24.49■■□□□ 1.51
SCLT1-205ENST00000503401 PIK3C2BO00750 1634 aa24.47■■□□□ 1.51
SCLT1-205ENST00000503401 IDI1Q13907 227 aa24.46■■□□□ 1.51
SCLT1-205ENST00000503401 HRCP23327 699 aa24.45■■□□□ 1.5
SCLT1-205ENST00000503401 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
SCLT1-205ENST00000503401 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
SCLT1-205ENST00000503401 PTPRTO14522 1441 aa24.42■■□□□ 1.5
SCLT1-205ENST00000503401 SLC52A1Q9NWF4 448 aa24.42■■□□□ 1.5
SCLT1-205ENST00000503401 PLA2R1Q13018 1463 aa24.41■■□□□ 1.5
SCLT1-205ENST00000503401 MYO5BQ9ULV0 1848 aa24.4■■□□□ 1.5
SCLT1-205ENST00000503401 STRCQ7RTU9 1775 aa24.4■■□□□ 1.5
SCLT1-205ENST00000503401 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.5
SCLT1-205ENST00000503401 TRPM2O94759 1503 aa24.39■■□□□ 1.49
SCLT1-205ENST00000503401 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.49
SCLT1-205ENST00000503401 THEMISQ8N1K5 641 aaPredicted RBP24.38■■□□□ 1.49
SCLT1-205ENST00000503401 CLTCL1P53675 1640 aa24.37■■□□□ 1.49
SCLT1-205ENST00000503401 ADGRB3O60242 1522 aa24.37■■□□□ 1.49
SCLT1-205ENST00000503401 CHGAP10645 457 aaKnown RBP24.36■■□□□ 1.49
SCLT1-205ENST00000503401 NCKAP5LQ9HCH0 1330 aa24.35■■□□□ 1.49
SCLT1-205ENST00000503401 KDM5AP29375 1690 aaKnown RBP24.34■■□□□ 1.49
SCLT1-205ENST00000503401 TMEM131LA2VDJ0 1609 aa24.34■■□□□ 1.49
SCLT1-205ENST00000503401 POLR1AO95602 1720 aaPredicted RBP24.31■■□□□ 1.48
SCLT1-205ENST00000503401 KIF1BO60333 1816 aa24.29■■□□□ 1.48
SCLT1-205ENST00000503401 TMEM2Q9UHN6 1383 aa24.28■■□□□ 1.48
SCLT1-205ENST00000503401 SLIT1O75093 1534 aa24.28■■□□□ 1.48
SCLT1-205ENST00000503401 ANKLE2Q86XL3 938 aa24.27■■□□□ 1.48
SCLT1-205ENST00000503401 ARHGAP23Q9P227 1491 aa24.27■■□□□ 1.48
SCLT1-205ENST00000503401 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
SCLT1-205ENST00000503401 LTKP29376 864 aa24.26■■□□□ 1.47
SCLT1-205ENST00000503401 NEURL4Q96JN8 1562 aa24.26■■□□□ 1.47
SCLT1-205ENST00000503401 TXNDC2Q86VQ3 553 aa24.24■■□□□ 1.47
SCLT1-205ENST00000503401 ANKRD30BQ9BXX2 1392 aa24.23■■□□□ 1.47
SCLT1-205ENST00000503401 SCAF11Q99590 1463 aaKnown RBP24.23■■□□□ 1.47
SCLT1-205ENST00000503401 ZNF326Q5BKZ1 582 aaKnown RBP24.22■■□□□ 1.47
SCLT1-205ENST00000503401 NUTM2DQ5VT03 806 aaPredicted RBP24.22■■□□□ 1.47
SCLT1-205ENST00000503401 EID1Q9Y6B2 187 aa24.21■■□□□ 1.47
SCLT1-205ENST00000503401 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms