RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
CPNE4-202ENST00000502818 RTEL1-TNFRSF6BF6WH68 1400 aa10.58□□□□□ -0.72
CPNE4-202ENST00000502818 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
CPNE4-202ENST00000502818 DUOX2Q9NRD8 1548 aa10.57□□□□□ -0.72
CPNE4-202ENST00000502818 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-202ENST00000502818 POGZQ7Z3K3 1410 aa10.57□□□□□ -0.72
CPNE4-202ENST00000502818 INO80Q9ULG1 1556 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-202ENST00000502818 GLI2P10070 1586 aa10.56□□□□□ -0.72
CPNE4-202ENST00000502818 TONSLQ96HA7 1378 aa10.56□□□□□ -0.72
CPNE4-202ENST00000502818 KDM5DQ9BY66 1539 aa10.56□□□□□ -0.72
CPNE4-202ENST00000502818 KIDINS220Q9ULH0 1771 aa10.55□□□□□ -0.72
CPNE4-202ENST00000502818 FAM135AQ9P2D6 1515 aa10.55□□□□□ -0.72
CPNE4-202ENST00000502818 L3MBTL2Q969R5 705 aa10.55□□□□□ -0.72
CPNE4-202ENST00000502818 ERBINQ96RT1 1412 aa10.55□□□□□ -0.72
CPNE4-202ENST00000502818 ZNF518AQ6AHZ1 1483 aa10.54□□□□□ -0.72
CPNE4-202ENST00000502818 TSPOAP1O95153 1857 aa10.54□□□□□ -0.72
CPNE4-202ENST00000502818 KIF3BO15066 747 aa10.54□□□□□ -0.72
CPNE4-202ENST00000502818 PPRC1Q5VV67 1664 aaKnown RBP10.54□□□□□ -0.72
CPNE4-202ENST00000502818 NEO1Q92859 1461 aa10.54□□□□□ -0.72
CPNE4-202ENST00000502818 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
CPNE4-202ENST00000502818 UNC13BO14795 1591 aa10.54□□□□□ -0.72
CPNE4-202ENST00000502818 DHX29Q7Z478 1369 aaKnown RBP10.53□□□□□ -0.72
CPNE4-202ENST00000502818 KDM5CP41229 1560 aa10.53□□□□□ -0.72
CPNE4-202ENST00000502818 PLA2R1Q13018 1463 aa10.53□□□□□ -0.72
CPNE4-202ENST00000502818 RPRD2Q5VT52 1461 aaKnown RBP10.53□□□□□ -0.72
CPNE4-202ENST00000502818 HAX1O00165 279 aa10.52□□□□□ -0.72
CPNE4-202ENST00000502818 YEATS2Q9ULM3 1422 aa10.52□□□□□ -0.73
CPNE4-202ENST00000502818 MAGI2Q86UL8 1455 aa10.52□□□□□ -0.73
CPNE4-202ENST00000502818 TIMELESSQ9UNS1 1208 aa10.52□□□□□ -0.73
CPNE4-202ENST00000502818 FRMPD1Q5SYB0 1578 aa10.52□□□□□ -0.73
CPNE4-202ENST00000502818 COL17A1Q9UMD9 1497 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-202ENST00000502818 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
CPNE4-202ENST00000502818 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
CPNE4-202ENST00000502818 TEX14Q8IWB6 1497 aa10.51□□□□□ -0.73
CPNE4-202ENST00000502818 MLH3Q9UHC1 1453 aa10.5□□□□□ -0.73
CPNE4-202ENST00000502818 KIF13AQ9H1H9 1805 aa10.5□□□□□ -0.73
CPNE4-202ENST00000502818 ABCA6Q8N139 1617 aa10.5□□□□□ -0.73
CPNE4-202ENST00000502818 A2MP01023 1474 aa10.5□□□□□ -0.73
CPNE4-202ENST00000502818 ACIN1Q9UKV3 1341 aaKnown RBP10.5□□□□□ -0.73
CPNE4-202ENST00000502818 IQGAP3Q86VI3 1631 aa10.49□□□□□ -0.73
CPNE4-202ENST00000502818 MROH1Q8NDA8 1641 aa10.49□□□□□ -0.73
CPNE4-202ENST00000502818 RICTORQ6R327 1708 aa10.49□□□□□ -0.73
CPNE4-202ENST00000502818 HECW2Q9P2P5 1572 aa10.49□□□□□ -0.73
CPNE4-202ENST00000502818 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
CPNE4-202ENST00000502818 GGT6Q6P531 493 aa10.48□□□□□ -0.73
CPNE4-202ENST00000502818 DIP2CQ9Y2E4 1556 aa10.47□□□□□ -0.73
CPNE4-202ENST00000502818 DEPDC5O75140 1603 aa10.46□□□□□ -0.73
CPNE4-202ENST00000502818 POTEGQ6S5H5 508 aa10.46□□□□□ -0.74
CPNE4-202ENST00000502818 VWDEQ8N2E2 1590 aa10.46□□□□□ -0.74
CPNE4-202ENST00000502818 RGL3Q3MIN7 710 aa10.45□□□□□ -0.74
CPNE4-202ENST00000502818 ZNF326Q5BKZ1 582 aaKnown RBP10.45□□□□□ -0.74
CPNE4-202ENST00000502818 KDM2AQ9Y2K7 1162 aa10.45□□□□□ -0.74
CPNE4-202ENST00000502818 E9PCH4 1651 aa10.44□□□□□ -0.74
CPNE4-202ENST00000502818 PRDM15P57071 1507 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-202ENST00000502818 ATP10AO60312 1499 aa10.43□□□□□ -0.74
CPNE4-202ENST00000502818 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
CPNE4-202ENST00000502818 EIF2AK4Q9P2K8 1649 aaKnown RBP10.42□□□□□ -0.74
CPNE4-202ENST00000502818 DCAF11Q8TEB1 546 aa10.42□□□□□ -0.74
CPNE4-202ENST00000502818 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
CPNE4-202ENST00000502818 UGGT1Q9NYU2 1555 aa10.41□□□□□ -0.74
CPNE4-202ENST00000502818 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
CPNE4-202ENST00000502818 HSPA5P11021 654 aaKnown RBP10.41□□□□□ -0.74
CPNE4-202ENST00000502818 KANK1Q14678 1352 aa10.41□□□□□ -0.74
CPNE4-202ENST00000502818 PTPRTO14522 1441 aa10.4□□□□□ -0.74
CPNE4-202ENST00000502818 CEP152O94986 1710 aa10.4□□□□□ -0.74
CPNE4-202ENST00000502818 ZMYM4Q5VZL5 1548 aa10.4□□□□□ -0.74
CPNE4-202ENST00000502818 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.74
CPNE4-202ENST00000502818 TET3O43151 1660 aa10.39□□□□□ -0.75
CPNE4-202ENST00000502818 WASHC2CQ9Y4E1 1318 aa10.39□□□□□ -0.75
CPNE4-202ENST00000502818 NPATQ14207 1427 aa10.39□□□□□ -0.75
CPNE4-202ENST00000502818 ILDR1Q86SU0 546 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-202ENST00000502818 MIER1Q8N108 512 aa10.39□□□□□ -0.75
CPNE4-202ENST00000502818 C11orf95C9JLR9 678 aaPredicted RBP10.38□□□□□ -0.75
CPNE4-202ENST00000502818 MLECQ14165 292 aa10.38□□□□□ -0.75
CPNE4-202ENST00000502818 ABCC3O15438 1527 aa10.38□□□□□ -0.75
CPNE4-202ENST00000502818 EFCAB6Q5THR3 1501 aa10.38□□□□□ -0.75
CPNE4-202ENST00000502818 CLTCL1P53675 1640 aa10.38□□□□□ -0.75
CPNE4-202ENST00000502818 SPATA31E1Q6ZUB1 1445 aa10.37□□□□□ -0.75
CPNE4-202ENST00000502818 LMTK2Q8IWU2 1503 aa10.37□□□□□ -0.75
CPNE4-202ENST00000502818 TRPM2O94759 1503 aa10.36□□□□□ -0.75
CPNE4-202ENST00000502818 DDX10Q13206 875 aaKnown RBP10.36□□□□□ -0.75
CPNE4-202ENST00000502818 NBPF1Q3BBV0 1214 aa10.36□□□□□ -0.75
CPNE4-202ENST00000502818 CFAP65Q6ZU64 1925 aaKnown RBP10.36□□□□□ -0.75
CPNE4-202ENST00000502818 BCORL1Q5H9F3 1711 aa10.36□□□□□ -0.75
CPNE4-202ENST00000502818 UHRF1BP1Q6BDS2 1440 aa10.36□□□□□ -0.75
CPNE4-202ENST00000502818 SPHKAPQ2M3C7 1700 aa10.36□□□□□ -0.75
CPNE4-202ENST00000502818 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-202ENST00000502818 PRAG1Q86YV5 1406 aa10.34□□□□□ -0.75
CPNE4-202ENST00000502818 EIF4G2P78344 907 aaKnown RBP eCLIP10.34□□□□□ -0.75
CPNE4-202ENST00000502818 DSG3P32926 999 aa10.33□□□□□ -0.76
CPNE4-202ENST00000502818 WASHC2AQ641Q2 1341 aa10.32□□□□□ -0.76
CPNE4-202ENST00000502818 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
CPNE4-202ENST00000502818 CAMSAP1Q5T5Y3 1602 aa10.32□□□□□ -0.76
CPNE4-202ENST00000502818 ARHGEF40Q8TER5 1519 aa10.32□□□□□ -0.76
CPNE4-202ENST00000502818 RALGAPBQ86X10 1494 aa10.32□□□□□ -0.76
CPNE4-202ENST00000502818 CARD11Q9BXL7 1154 aa10.31□□□□□ -0.76
CPNE4-202ENST00000502818 USP47Q96K76 1375 aa10.3□□□□□ -0.76
CPNE4-202ENST00000502818 SYNMO15061 1565 aa10.3□□□□□ -0.76
CPNE4-202ENST00000502818 NOS1P29475 1434 aa10.3□□□□□ -0.76
CPNE4-202ENST00000502818 NUTM2DQ5VT03 806 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms