RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 KDM5DQ9BY66 1539 aa39.58■■■■□ 3.93
PROM1-202ENST00000502501 KIF3BO15066 747 aa39.57■■■■□ 3.93
PROM1-202ENST00000502501 ZMYM3Q14202 1370 aa39.56■■■■□ 3.92
PROM1-202ENST00000502501 ANKRD30AQ9BXX3 1397 aa39.56■■■■□ 3.92
PROM1-202ENST00000502501 NCOA1Q15788 1441 aa39.54■■■■□ 3.92
PROM1-202ENST00000502501 CEBPAP49715 358 aaPredicted RBP39.53■■■■□ 3.92
PROM1-202ENST00000502501 ZC3H13Q5T200 1668 aaKnown RBP39.52■■■■□ 3.92
PROM1-202ENST00000502501 FAM50AQ14320 339 aaKnown RBP39.51■■■■□ 3.92
PROM1-202ENST00000502501 MROH1Q8NDA8 1641 aa39.5■■■■□ 3.91
PROM1-202ENST00000502501 DEPDC5O75140 1603 aa39.47■■■■□ 3.91
PROM1-202ENST00000502501 PRDM15P57071 1507 aaPredicted RBP39.46■■■■□ 3.91
PROM1-202ENST00000502501 PLPPR3Q6T4P5 718 aa39.45■■■■□ 3.91
PROM1-202ENST00000502501 UHRF1BP1Q6BDS2 1440 aa39.45■■■■□ 3.91
PROM1-202ENST00000502501 RRBP1Q9P2E9 1410 aaKnown RBP39.45■■■■□ 3.91
PROM1-202ENST00000502501 PTPRKQ15262 1439 aa39.44■■■■□ 3.9
PROM1-202ENST00000502501 ABCC3O15438 1527 aa39.41■■■■□ 3.9
PROM1-202ENST00000502501 RRP7BPQ9NSQ0 103 aa39.41■■■■□ 3.9
PROM1-202ENST00000502501 ROCK1Q13464 1354 aa39.4■■■■□ 3.9
PROM1-202ENST00000502501 PZPP20742 1482 aa39.4■■■■□ 3.9
PROM1-202ENST00000502501 WASHC2CQ9Y4E1 1318 aa39.39■■■■□ 3.9
PROM1-202ENST00000502501 PPARGC1BQ86YN6 1023 aaKnown RBP39.37■■■■□ 3.89
PROM1-202ENST00000502501 CHIC2Q9UKJ5 165 aa39.36■■■■□ 3.89
PROM1-202ENST00000502501 ZNF142P52746 1687 aaPredicted RBP39.32■■■■□ 3.89
PROM1-202ENST00000502501 MYO3AQ8NEV4 1616 aa39.32■■■■□ 3.88
PROM1-202ENST00000502501 ANKRD50Q9ULJ7 1429 aa39.29■■■■□ 3.88
PROM1-202ENST00000502501 VWDEQ8N2E2 1590 aa39.29■■■■□ 3.88
PROM1-202ENST00000502501 CAMSAP1Q5T5Y3 1602 aa39.27■■■■□ 3.88
PROM1-202ENST00000502501 CEP152O94986 1710 aa39.26■■■■□ 3.87
PROM1-202ENST00000502501 LMTK2Q8IWU2 1503 aa39.25■■■■□ 3.87
PROM1-202ENST00000502501 ARHGAP31Q2M1Z3 1444 aa39.23■■■■□ 3.87
PROM1-202ENST00000502501 HSPA2P54652 639 aa39.22■■■■□ 3.87
PROM1-202ENST00000502501 CEP170BQ9Y4F5 1589 aaPredicted RBP39.21■■■■□ 3.87
PROM1-202ENST00000502501 SPATA31D1Q6ZQQ2 1576 aa39.21■■■■□ 3.87
PROM1-202ENST00000502501 KANK1Q14678 1352 aa39.21■■■■□ 3.87
PROM1-202ENST00000502501 TNRQ92752 1358 aa39.17■■■■□ 3.86
PROM1-202ENST00000502501 UNC13BO14795 1591 aa39.16■■■■□ 3.86
PROM1-202ENST00000502501 A2ML1A8K2U0 1454 aa39.15■■■■□ 3.86
PROM1-202ENST00000502501 NLRP1Q9C000 1473 aa39.14■■■■□ 3.86
PROM1-202ENST00000502501 ERVK-7P63135 1459 aa39.12■■■■□ 3.85
PROM1-202ENST00000502501 STRCQ7RTU9 1775 aa39.11■■■■□ 3.85
PROM1-202ENST00000502501 FBXO31Q5XUX0 539 aaPredicted RBP39.1■■■■□ 3.85
PROM1-202ENST00000502501 PLA2R1Q13018 1463 aa39.1■■■■□ 3.85
PROM1-202ENST00000502501 EFCAB6Q5THR3 1501 aa39.09■■■■□ 3.85
PROM1-202ENST00000502501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.03■■■■□ 3.84
PROM1-202ENST00000502501 ITGAEP38570 1179 aa39.02■■■■□ 3.84
PROM1-202ENST00000502501 TET3O43151 1660 aa39.01■■■■□ 3.84
PROM1-202ENST00000502501 RPRD2Q5VT52 1461 aaKnown RBP39.01■■■■□ 3.84
PROM1-202ENST00000502501 GCC2Q8IWJ2 1684 aa39■■■■□ 3.83
PROM1-202ENST00000502501 DMRT2Q9Y5R5 561 aa38.99■■■■□ 3.83
PROM1-202ENST00000502501 IQGAP3Q86VI3 1631 aa38.99■■■■□ 3.83
PROM1-202ENST00000502501 PTPRTO14522 1441 aa38.97■■■■□ 3.83
PROM1-202ENST00000502501 HFM1A2PYH4 1435 aa38.94■■■■□ 3.82
PROM1-202ENST00000502501 NAIPQ13075 1403 aa38.94■■■■□ 3.82
PROM1-202ENST00000502501 UGGT1Q9NYU2 1555 aa38.93■■■■□ 3.82
PROM1-202ENST00000502501 NOS1P29475 1434 aa38.9■■■■□ 3.82
PROM1-202ENST00000502501 KDM5AP29375 1690 aaKnown RBP38.88■■■■□ 3.81
PROM1-202ENST00000502501 PKD2Q13563 968 aa38.88■■■■□ 3.81
PROM1-202ENST00000502501 CFAP65Q6ZU64 1925 aaKnown RBP38.86■■■■□ 3.81
PROM1-202ENST00000502501 UBR1Q8IWV7 1749 aa38.84■■■■□ 3.81
PROM1-202ENST00000502501 SYNMO15061 1565 aa38.84■■■■□ 3.81
PROM1-202ENST00000502501 THEMISQ8N1K5 641 aaPredicted RBP38.84■■■■□ 3.81
PROM1-202ENST00000502501 POLR1AO95602 1720 aaPredicted RBP38.83■■■■□ 3.81
PROM1-202ENST00000502501 NUP155O75694 1391 aa38.81■■■■□ 3.8
PROM1-202ENST00000502501 E9PCH4 1651 aa38.79■■■■□ 3.8
PROM1-202ENST00000502501 PIK3C2BO00750 1634 aa38.76■■■■□ 3.8
PROM1-202ENST00000502501 NEURL4Q96JN8 1562 aa38.75■■■■□ 3.79
PROM1-202ENST00000502501 SLIT1O75093 1534 aa38.73■■■■□ 3.79
PROM1-202ENST00000502501 MED14O60244 1454 aa38.73■■■■□ 3.79
PROM1-202ENST00000502501 SLC52A1Q9NWF4 448 aa38.72■■■■□ 3.79
PROM1-202ENST00000502501 ARHGAP23Q9P227 1491 aa38.71■■■■□ 3.79
PROM1-202ENST00000502501 NCKAP5LQ9HCH0 1330 aa38.7■■■■□ 3.79
PROM1-202ENST00000502501 ADGRB3O60242 1522 aa38.68■■■■□ 3.78
PROM1-202ENST00000502501 ANKLE2Q86XL3 938 aa38.66■■■■□ 3.78
PROM1-202ENST00000502501 IDI1Q13907 227 aa38.64■■■■□ 3.78
PROM1-202ENST00000502501 SCAF11Q99590 1463 aaKnown RBP38.59■■■■□ 3.77
PROM1-202ENST00000502501 TMEM2Q9UHN6 1383 aa38.58■■■■□ 3.77
PROM1-202ENST00000502501 LTBP4Q8N2S1 1624 aa38.58■■■■□ 3.77
PROM1-202ENST00000502501 IQGAP1P46940 1657 aa38.58■■■■□ 3.77
PROM1-202ENST00000502501 ACIN1Q9UKV3 1341 aaKnown RBP38.58■■■■□ 3.77
PROM1-202ENST00000502501 SPHKAPQ2M3C7 1700 aa38.57■■■■□ 3.76
PROM1-202ENST00000502501 NPHP4O75161 1426 aaPredicted RBP38.56■■■■□ 3.76
PROM1-202ENST00000502501 TMEM131LA2VDJ0 1609 aa38.54■■■■□ 3.76
PROM1-202ENST00000502501 STAG3Q9UJ98 1225 aa38.5■■■■□ 3.75
PROM1-202ENST00000502501 TRPM2O94759 1503 aa38.48■■■■□ 3.75
PROM1-202ENST00000502501 IQSEC2Q5JU85 1478 aa38.48■■■■□ 3.75
PROM1-202ENST00000502501 CERKQ8TCT0 537 aa38.47■■■■□ 3.75
PROM1-202ENST00000502501 EID1Q9Y6B2 187 aa38.45■■■■□ 3.75
PROM1-202ENST00000502501 SETD5Q9C0A6 1442 aa38.45■■■■□ 3.75
PROM1-202ENST00000502501 LTKP29376 864 aa38.43■■■■□ 3.74
PROM1-202ENST00000502501 ZFYVE9O95405 1425 aa38.42■■■■□ 3.74
PROM1-202ENST00000502501 MYO5BQ9ULV0 1848 aa38.42■■■■□ 3.74
PROM1-202ENST00000502501 TXNDC2Q86VQ3 553 aa38.41■■■■□ 3.74
PROM1-202ENST00000502501 TRIM52Q96A61 297 aa38.4■■■■□ 3.74
PROM1-202ENST00000502501 ZNF335Q9H4Z2 1342 aaPredicted RBP38.38■■■■□ 3.74
PROM1-202ENST00000502501 CPS1P31327 1500 aa38.38■■■■□ 3.73
PROM1-202ENST00000502501 FBXO41Q8TF61 875 aa38.36■■■■□ 3.73
PROM1-202ENST00000502501 SLC4A1APQ9BWU0 796 aaKnown RBP38.36■■■■□ 3.73
PROM1-202ENST00000502501 CLTCL1P53675 1640 aa38.34■■■■□ 3.73
PROM1-202ENST00000502501 RIMS2Q9UQ26 1411 aa38.31■■■■□ 3.72
PROM1-202ENST00000502501 HDGFP51858 240 aaKnown RBP38.3■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms