RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 IRF6O14896 467 aa11.18□□□□□ -0.62
PMPCB-208ENST00000498530 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
PMPCB-208ENST00000498530 FLIIQ13045 1269 aa11.17□□□□□ -0.62
PMPCB-208ENST00000498530 PARP9Q8IXQ6 854 aa11.17□□□□□ -0.62
PMPCB-208ENST00000498530 KIF3CO14782 793 aa11.15□□□□□ -0.62
PMPCB-208ENST00000498530 GNPATO15228 680 aa11.15□□□□□ -0.62
PMPCB-208ENST00000498530 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.62
PMPCB-208ENST00000498530 MYT1LQ9UL68 1186 aa11.15□□□□□ -0.62
PMPCB-208ENST00000498530 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
PMPCB-208ENST00000498530 HIC1Q14526 733 aa11.14□□□□□ -0.63
PMPCB-208ENST00000498530 PLPP6Q8IY26 295 aa11.14□□□□□ -0.63
PMPCB-208ENST00000498530 PTGER2P43116 358 aa11.13□□□□□ -0.63
PMPCB-208ENST00000498530 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
PMPCB-208ENST00000498530 OSBPP22059 807 aa11.12□□□□□ -0.63
PMPCB-208ENST00000498530 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
PMPCB-208ENST00000498530 ONECUT3O60422 494 aaPredicted RBP11.11□□□□□ -0.63
PMPCB-208ENST00000498530 FCHSD2O94868 740 aa11.11□□□□□ -0.63
PMPCB-208ENST00000498530 ZNF687Q8N1G0 1237 aa11.11□□□□□ -0.63
PMPCB-208ENST00000498530 C1orf115Q9H7X2 142 aa11.11□□□□□ -0.63
PMPCB-208ENST00000498530 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
PMPCB-208ENST00000498530 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
PMPCB-208ENST00000498530 C2orf72A6NCS6 295 aa11.09□□□□□ -0.63
PMPCB-208ENST00000498530 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
PMPCB-208ENST00000498530 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
PMPCB-208ENST00000498530 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
PMPCB-208ENST00000498530 FECHP22830 423 aa11.04□□□□□ -0.64
PMPCB-208ENST00000498530 A6NJR5 290 aa11.03□□□□□ -0.64
PMPCB-208ENST00000498530 TTLL12Q14166 644 aaPredicted RBP11.03□□□□□ -0.64
PMPCB-208ENST00000498530 PTGDRQ13258 359 aa11.02□□□□□ -0.65
PMPCB-208ENST00000498530 TRIM26Q12899 539 aaPredicted RBP11.01□□□□□ -0.65
PMPCB-208ENST00000498530 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
PMPCB-208ENST00000498530 APBB1O00213 710 aa11□□□□□ -0.65
PMPCB-208ENST00000498530 MS4A1P11836 297 aa10.99□□□□□ -0.65
PMPCB-208ENST00000498530 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
PMPCB-208ENST00000498530 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
PMPCB-208ENST00000498530 DDX12PQ92771 950 aa10.98□□□□□ -0.65
PMPCB-208ENST00000498530 ARID3AQ99856 593 aa10.98□□□□□ -0.65
PMPCB-208ENST00000498530 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
PMPCB-208ENST00000498530 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
PMPCB-208ENST00000498530 UPF1Q92900 1129 aaKnown RBP eCLIP10.97□□□□□ -0.65
PMPCB-208ENST00000498530 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
PMPCB-208ENST00000498530 ARID3CA6NKF2 412 aa10.96□□□□□ -0.65
PMPCB-208ENST00000498530 TBC1D12O60347 775 aa10.96□□□□□ -0.65
PMPCB-208ENST00000498530 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
PMPCB-208ENST00000498530 TRAK2O60296 914 aa10.94□□□□□ -0.66
PMPCB-208ENST00000498530 MCM6Q14566 821 aa10.94□□□□□ -0.66
PMPCB-208ENST00000498530 EVI5O60447 810 aa10.93□□□□□ -0.66
PMPCB-208ENST00000498530 HRCP23327 699 aa10.93□□□□□ -0.66
PMPCB-208ENST00000498530 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.663e-6■■■■□ 19.6
PMPCB-208ENST00000498530 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
PMPCB-208ENST00000498530 CLCN1P35523 988 aa10.92□□□□□ -0.66
PMPCB-208ENST00000498530 LSM11P83369 360 aaKnown RBP eCLIP10.91□□□□□ -0.66
PMPCB-208ENST00000498530 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
PMPCB-208ENST00000498530 CLUAP1Q96AJ1 413 aa10.9□□□□□ -0.66
PMPCB-208ENST00000498530 CCDC82Q8N4S0 544 aa10.89□□□□□ -0.67
PMPCB-208ENST00000498530 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
PMPCB-208ENST00000498530 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
PMPCB-208ENST00000498530 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
PMPCB-208ENST00000498530 EN1Q05925 392 aaPredicted RBP10.88□□□□□ -0.67
PMPCB-208ENST00000498530 SKIV2LQ15477 1246 aaKnown RBP10.87□□□□□ -0.67
PMPCB-208ENST00000498530 EPAS1Q99814 870 aa10.87□□□□□ -0.67
PMPCB-208ENST00000498530 NPDC1Q9NQX5 325 aaPredicted RBP10.87□□□□□ -0.67
PMPCB-208ENST00000498530 PHF14O94880 888 aa10.85□□□□□ -0.67
PMPCB-208ENST00000498530 SLC34A2O95436 690 aa10.84□□□□□ -0.67
PMPCB-208ENST00000498530 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
PMPCB-208ENST00000498530 PROSER2Q86WR7 435 aaPredicted RBP10.84□□□□□ -0.67
PMPCB-208ENST00000498530 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
PMPCB-208ENST00000498530 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
PMPCB-208ENST00000498530 FNBP4Q8N3X1 1017 aaPredicted RBP10.82□□□□□ -0.68
PMPCB-208ENST00000498530 SSTR3P32745 418 aaPredicted RBP10.81□□□□□ -0.68
PMPCB-208ENST00000498530 PBX2P40425 430 aa10.81□□□□□ -0.68
PMPCB-208ENST00000498530 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
PMPCB-208ENST00000498530 PHOX2BQ99453 314 aa10.81□□□□□ -0.68
PMPCB-208ENST00000498530 FAM217BQ9NTX9 383 aaPredicted RBP10.8□□□□□ -0.68
PMPCB-208ENST00000498530 PLA2G2EQ9NZK7 142 aa10.8□□□□□ -0.68
PMPCB-208ENST00000498530 NUDT7P0C024 238 aa10.79□□□□□ -0.68
PMPCB-208ENST00000498530 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.79□□□□□ -0.68
PMPCB-208ENST00000498530 ZBTB7CA1YPR0 619 aa10.78□□□□□ -0.68
PMPCB-208ENST00000498530 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
PMPCB-208ENST00000498530 MAP3K7O43318 606 aa10.78□□□□□ -0.68
PMPCB-208ENST00000498530 BEGAINQ9BUH8 593 aa10.78□□□□□ -0.68
PMPCB-208ENST00000498530 AXIN2Q9Y2T1 843 aa10.77□□□□□ -0.69
PMPCB-208ENST00000498530 METTL3Q86U44 580 aaKnown RBP10.76□□□□□ -0.69
PMPCB-208ENST00000498530 SERPINA10Q9UK55 444 aa10.76□□□□□ -0.69
PMPCB-208ENST00000498530 RAD21O60216 631 aa10.75□□□□□ -0.69
PMPCB-208ENST00000498530 OATP04181 439 aa10.75□□□□□ -0.69
PMPCB-208ENST00000498530 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
PMPCB-208ENST00000498530 LHX6Q9UPM6 363 aa10.75□□□□□ -0.69
PMPCB-208ENST00000498530 PCDHGA10Q9Y5H3 936 aa10.75□□□□□ -0.69
PMPCB-208ENST00000498530 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
PMPCB-208ENST00000498530 BANK1Q8NDB2 785 aa10.74□□□□□ -0.69
PMPCB-208ENST00000498530 FBXW7Q969H0 707 aa10.74□□□□□ -0.69
PMPCB-208ENST00000498530 HCSTQ9UBK5 93 aa10.74□□□□□ -0.69
PMPCB-208ENST00000498530 NPM2Q86SE8 214 aaKnown RBP10.73□□□□□ -0.69
PMPCB-208ENST00000498530 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
PMPCB-208ENST00000498530 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
PMPCB-208ENST00000498530 POM121Q96HA1 1249 aa10.73□□□□□ -0.69
PMPCB-208ENST00000498530 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
PMPCB-208ENST00000498530 TSR1Q2NL82 804 aaKnown RBP10.72□□□□□ -0.69
PMPCB-208ENST00000498530 CCDC97Q96F63 343 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms