RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-215ENST00000498528 CPS1P31327 1500 aa9.81□□□□□ -0.84
KDM3A-215ENST00000498528 TNRQ92752 1358 aa9.8□□□□□ -0.84
KDM3A-215ENST00000498528 NEURL4Q96JN8 1562 aa9.8□□□□□ -0.84
KDM3A-215ENST00000498528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.79□□□□□ -0.84
KDM3A-215ENST00000498528 ANKLE2Q86XL3 938 aa9.79□□□□□ -0.84
KDM3A-215ENST00000498528 ZNF644Q9H582 1327 aaPredicted RBP9.79□□□□□ -0.84
KDM3A-215ENST00000498528 MTUS2Q5JR59 1369 aa9.78□□□□□ -0.84
KDM3A-215ENST00000498528 KIF3BO15066 747 aa9.78□□□□□ -0.84
KDM3A-215ENST00000498528 KIAA1107Q9UPP5 1409 aa9.78□□□□□ -0.84
KDM3A-215ENST00000498528 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
KDM3A-215ENST00000498528 NPHP4O75161 1426 aaPredicted RBP9.76□□□□□ -0.85
KDM3A-215ENST00000498528 VWDEQ8N2E2 1590 aa9.75□□□□□ -0.85
KDM3A-215ENST00000498528 IQGAP1P46940 1657 aa9.75□□□□□ -0.85
KDM3A-215ENST00000498528 THEMISQ8N1K5 641 aaPredicted RBP9.75□□□□□ -0.85
KDM3A-215ENST00000498528 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
KDM3A-215ENST00000498528 UGGT1Q9NYU2 1555 aa9.75□□□□□ -0.85
KDM3A-215ENST00000498528 PZPP20742 1482 aa9.74□□□□□ -0.85
KDM3A-215ENST00000498528 FAM135AQ9P2D6 1515 aa9.74□□□□□ -0.85
KDM3A-215ENST00000498528 TIAM1Q13009 1591 aa9.74□□□□□ -0.85
KDM3A-215ENST00000498528 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
KDM3A-215ENST00000498528 DHX29Q7Z478 1369 aaKnown RBP9.74□□□□□ -0.85
KDM3A-215ENST00000498528 STRCP1A6NGW2 1772 aa9.73□□□□□ -0.85
KDM3A-215ENST00000498528 CFAP65Q6ZU64 1925 aaKnown RBP9.73□□□□□ -0.85
KDM3A-215ENST00000498528 RNF17Q9BXT8 1623 aaKnown RBP9.72□□□□□ -0.85
KDM3A-215ENST00000498528 MIA2Q96PC5 1412 aa9.72□□□□□ -0.85
KDM3A-215ENST00000498528 DEPDC5O75140 1603 aa9.71□□□□□ -0.85
KDM3A-215ENST00000498528 NLRP1Q9C000 1473 aa9.71□□□□□ -0.86
KDM3A-215ENST00000498528 MBD5Q9P267 1494 aa9.71□□□□□ -0.86
KDM3A-215ENST00000498528 LRRC7Q96NW7 1537 aa9.71□□□□□ -0.86
KDM3A-215ENST00000498528 RTEL1-TNFRSF6BF6WH68 1400 aa9.7□□□□□ -0.86
KDM3A-215ENST00000498528 CCDC141Q6ZP82 1450 aa9.7□□□□□ -0.86
KDM3A-215ENST00000498528 EHBP1L1Q8N3D4 1523 aa9.7□□□□□ -0.86
KDM3A-215ENST00000498528 SYNMO15061 1565 aa9.69□□□□□ -0.86
KDM3A-215ENST00000498528 MED14O60244 1454 aa9.69□□□□□ -0.86
KDM3A-215ENST00000498528 CAMSAP2Q08AD1 1489 aa9.69□□□□□ -0.86
KDM3A-215ENST00000498528 RGS17Q9UGC6 210 aaPredicted RBP9.68□□□□□ -0.86
KDM3A-215ENST00000498528 TSPY4P0CV99 314 aa9.67□□□□□ -0.86
KDM3A-215ENST00000498528 TSPY10P0CW01 314 aa9.67□□□□□ -0.86
KDM3A-215ENST00000498528 CEP152O94986 1710 aa9.67□□□□□ -0.86
KDM3A-215ENST00000498528 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
KDM3A-215ENST00000498528 SETD1AO15047 1707 aaKnown RBP9.65□□□□□ -0.86
KDM3A-215ENST00000498528 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.86
KDM3A-215ENST00000498528 TXNDC2Q86VQ3 553 aa9.65□□□□□ -0.86
KDM3A-215ENST00000498528 ABCC3O15438 1527 aa9.65□□□□□ -0.86
KDM3A-215ENST00000498528 XIRP1Q702N8 1843 aaKnown RBP9.65□□□□□ -0.86
KDM3A-215ENST00000498528 NCOA2Q15596 1464 aa9.65□□□□□ -0.87
KDM3A-215ENST00000498528 SCAF11Q99590 1463 aaKnown RBP9.65□□□□□ -0.87
KDM3A-215ENST00000498528 CEP162Q5TB80 1403 aa9.65□□□□□ -0.87
KDM3A-215ENST00000498528 POTEAQ6S8J7 498 aa9.64□□□□□ -0.87
KDM3A-215ENST00000498528 ERVK-7P63135 1459 aa9.64□□□□□ -0.87
KDM3A-215ENST00000498528 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
KDM3A-215ENST00000498528 STAG3Q9UJ98 1225 aa9.63□□□□□ -0.87
KDM3A-215ENST00000498528 LTKP29376 864 aa9.62□□□□□ -0.87
KDM3A-215ENST00000498528 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
KDM3A-215ENST00000498528 EID1Q9Y6B2 187 aa9.62□□□□□ -0.87
KDM3A-215ENST00000498528 ARHGEF5Q12774 1597 aa9.62□□□□□ -0.87
KDM3A-215ENST00000498528 BCANQ96GW7 911 aa9.61□□□□□ -0.87
KDM3A-215ENST00000498528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.871e-7■□□□□ 9.9
KDM3A-215ENST00000498528 ROBO1Q9Y6N7 1651 aa9.61□□□□□ -0.87
KDM3A-215ENST00000498528 TMEM94Q12767 1356 aa9.6□□□□□ -0.87
KDM3A-215ENST00000498528 EIF2AK4Q9P2K8 1649 aaKnown RBP9.6□□□□□ -0.87
KDM3A-215ENST00000498528 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
KDM3A-215ENST00000498528 PIK3C2BO00750 1634 aa9.59□□□□□ -0.87
KDM3A-215ENST00000498528 MROH1Q8NDA8 1641 aa9.59□□□□□ -0.87
KDM3A-215ENST00000498528 SLC26A8Q96RN1 970 aa9.58□□□□□ -0.88
KDM3A-215ENST00000498528 PHLPP1O60346 1717 aa9.58□□□□□ -0.88
KDM3A-215ENST00000498528 FAM135BQ49AJ0 1406 aa9.57□□□□□ -0.88
KDM3A-215ENST00000498528 SLIT1O75093 1534 aa9.57□□□□□ -0.88
KDM3A-215ENST00000498528 TRIM52Q96A61 297 aa9.57□□□□□ -0.88
KDM3A-215ENST00000498528 MAST1Q9Y2H9 1570 aa9.57□□□□□ -0.88
KDM3A-215ENST00000498528 ARHGAP23Q9P227 1491 aa9.56□□□□□ -0.88
KDM3A-215ENST00000498528 MEX3CQ5U5Q3 659 aaKnown RBP9.56□□□□□ -0.88
KDM3A-215ENST00000498528 TMEM2Q9UHN6 1383 aa9.55□□□□□ -0.88
KDM3A-215ENST00000498528 RRP7BPQ9NSQ0 103 aa9.55□□□□□ -0.88
KDM3A-215ENST00000498528 DUOX2Q9NRD8 1548 aa9.55□□□□□ -0.88
KDM3A-215ENST00000498528 MSH6P52701 1360 aa9.54□□□□□ -0.88
KDM3A-215ENST00000498528 KCNA6P17658 529 aa9.54□□□□□ -0.88
KDM3A-215ENST00000498528 C14orf37Q86TY3 774 aa9.54□□□□□ -0.88
KDM3A-215ENST00000498528 MAP3K1Q13233 1512 aa9.54□□□□□ -0.88
KDM3A-215ENST00000498528 EFCAB6Q5THR3 1501 aa9.54□□□□□ -0.88
KDM3A-215ENST00000498528 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
KDM3A-215ENST00000498528 KANK1Q14678 1352 aa9.53□□□□□ -0.88
KDM3A-215ENST00000498528 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
KDM3A-215ENST00000498528 JCADQ9P266 1359 aa9.52□□□□□ -0.88
KDM3A-215ENST00000498528 PRDM15P57071 1507 aaPredicted RBP9.52□□□□□ -0.88
KDM3A-215ENST00000498528 SLAIN2Q9P270 581 aa9.52□□□□□ -0.89
KDM3A-215ENST00000498528 IDI1Q13907 227 aa9.51□□□□□ -0.89
KDM3A-215ENST00000498528 ARHGAP31Q2M1Z3 1444 aa9.5□□□□□ -0.89
KDM3A-215ENST00000498528 MYOM3Q5VTT5 1437 aa9.5□□□□□ -0.89
KDM3A-215ENST00000498528 PPP1R15AO75807 674 aaPredicted RBP9.5□□□□□ -0.89
KDM3A-215ENST00000498528 UPF1Q92900 1129 aaKnown RBP eCLIP9.5□□□□□ -0.89
KDM3A-215ENST00000498528 NKTRP30414 1462 aaKnown RBP9.5□□□□□ -0.89
KDM3A-215ENST00000498528 CROCC2H7BZ55 1655 aa9.5□□□□□ -0.89
KDM3A-215ENST00000498528 TET3O43151 1660 aa9.49□□□□□ -0.89
KDM3A-215ENST00000498528 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-215ENST00000498528 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-215ENST00000498528 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-215ENST00000498528 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-215ENST00000498528 CHIC2Q9UKJ5 165 aa9.49□□□□□ -0.89
KDM3A-215ENST00000498528 ADGRB3O60242 1522 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms