RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 KIF3BO15066 747 aa22.48■■□□□ 1.19
CCDC58-207ENST00000498466 TNRQ92752 1358 aa22.48■■□□□ 1.19
CCDC58-207ENST00000498466 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
CCDC58-207ENST00000498466 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
CCDC58-207ENST00000498466 PIP4K2BP78356 416 aa22.46■■□□□ 1.19
CCDC58-207ENST00000498466 TOM1O60784 492 aa22.44■■□□□ 1.18
CCDC58-207ENST00000498466 CEP162Q5TB80 1403 aa22.44■■□□□ 1.18
CCDC58-207ENST00000498466 WASHC2CQ9Y4E1 1318 aa22.43■■□□□ 1.18
CCDC58-207ENST00000498466 HSPA1LP34931 641 aa22.43■■□□□ 1.18
CCDC58-207ENST00000498466 CPS1P31327 1500 aa22.42■■□□□ 1.18
CCDC58-207ENST00000498466 KDM5DQ9BY66 1539 aa22.42■■□□□ 1.18
CCDC58-207ENST00000498466 PZPP20742 1482 aa22.42■■□□□ 1.18
CCDC58-207ENST00000498466 NEURL4Q96JN8 1562 aa22.42■■□□□ 1.18
CCDC58-207ENST00000498466 CCDC141Q6ZP82 1450 aa22.41■■□□□ 1.18
CCDC58-207ENST00000498466 SHANK2Q9UPX8 1470 aa22.41■■□□□ 1.18
CCDC58-207ENST00000498466 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
CCDC58-207ENST00000498466 ANKLE2Q86XL3 938 aa22.41■■□□□ 1.18
CCDC58-207ENST00000498466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.39■■□□□ 1.18
CCDC58-207ENST00000498466 FAM135AQ9P2D6 1515 aa22.39■■□□□ 1.17
CCDC58-207ENST00000498466 RSPH4AQ5TD94 716 aa22.38■■□□□ 1.17
CCDC58-207ENST00000498466 THEMISQ8N1K5 641 aaPredicted RBP22.38■■□□□ 1.17
CCDC58-207ENST00000498466 CAMSAP2Q08AD1 1489 aa22.37■■□□□ 1.17
CCDC58-207ENST00000498466 MIA2Q96PC5 1412 aa22.36■■□□□ 1.17
CCDC58-207ENST00000498466 MED1Q15648 1581 aaPredicted RBP22.35■■□□□ 1.17
CCDC58-207ENST00000498466 NCOA2Q15596 1464 aa22.34■■□□□ 1.17
CCDC58-207ENST00000498466 NLRP1Q9C000 1473 aa22.34■■□□□ 1.17
CCDC58-207ENST00000498466 UGGT1Q9NYU2 1555 aa22.34■■□□□ 1.17
CCDC58-207ENST00000498466 TSPY4P0CV99 314 aa22.33■■□□□ 1.17
CCDC58-207ENST00000498466 TSPY10P0CW01 314 aa22.33■■□□□ 1.17
CCDC58-207ENST00000498466 NPHP4O75161 1426 aaPredicted RBP22.32■■□□□ 1.16
CCDC58-207ENST00000498466 VWDEQ8N2E2 1590 aa22.32■■□□□ 1.16
CCDC58-207ENST00000498466 MED14O60244 1454 aa22.29■■□□□ 1.16
CCDC58-207ENST00000498466 DEPDC5O75140 1603 aa22.28■■□□□ 1.16
CCDC58-207ENST00000498466 ARHGEF5Q12774 1597 aa22.27■■□□□ 1.16
CCDC58-207ENST00000498466 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
CCDC58-207ENST00000498466 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
CCDC58-207ENST00000498466 ABCC3O15438 1527 aa22.22■■□□□ 1.15
CCDC58-207ENST00000498466 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.15
CCDC58-207ENST00000498466 LRRC7Q96NW7 1537 aa22.2■■□□□ 1.14
CCDC58-207ENST00000498466 ERVK-7P63135 1459 aa22.19■■□□□ 1.14
CCDC58-207ENST00000498466 ZC3H13Q5T200 1668 aaKnown RBP22.19■■□□□ 1.14
CCDC58-207ENST00000498466 MAST1Q9Y2H9 1570 aa22.16■■□□□ 1.14
CCDC58-207ENST00000498466 STRCP1A6NGW2 1772 aa22.15■■□□□ 1.14
CCDC58-207ENST00000498466 SYNMO15061 1565 aa22.15■■□□□ 1.14
CCDC58-207ENST00000498466 LRRC9Q6ZRR7 1453 aa22.15■■□□□ 1.14
CCDC58-207ENST00000498466 EIF2AK4Q9P2K8 1649 aaKnown RBP22.14■■□□□ 1.14
CCDC58-207ENST00000498466 SCAF11Q99590 1463 aaKnown RBP22.12■■□□□ 1.13
CCDC58-207ENST00000498466 MROH1Q8NDA8 1641 aa22.11■■□□□ 1.13
CCDC58-207ENST00000498466 TXNDC2Q86VQ3 553 aa22.1■■□□□ 1.13
CCDC58-207ENST00000498466 UBR1Q8IWV7 1749 aa22.1■■□□□ 1.13
CCDC58-207ENST00000498466 LTKP29376 864 aa22.09■■□□□ 1.13
CCDC58-207ENST00000498466 CEP152O94986 1710 aa22.09■■□□□ 1.13
CCDC58-207ENST00000498466 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.13
CCDC58-207ENST00000498466 DUOX2Q9NRD8 1548 aa22.07■■□□□ 1.12
CCDC58-207ENST00000498466 EID1Q9Y6B2 187 aa22.07■■□□□ 1.12
CCDC58-207ENST00000498466 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
CCDC58-207ENST00000498466 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
CCDC58-207ENST00000498466 ARHGAP23Q9P227 1491 aa22.05■■□□□ 1.12
CCDC58-207ENST00000498466 SLIT1O75093 1534 aa22.05■■□□□ 1.12
CCDC58-207ENST00000498466 KIF15Q9NS87 1388 aa22.03■■□□□ 1.12
CCDC58-207ENST00000498466 CFAP65Q6ZU64 1925 aaKnown RBP22.03■■□□□ 1.12
CCDC58-207ENST00000498466 ARHGAP31Q2M1Z3 1444 aa22.03■■□□□ 1.12
CCDC58-207ENST00000498466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCDC58-207ENST00000498466 RRP7BPQ9NSQ0 103 aa22.02■■□□□ 1.12
CCDC58-207ENST00000498466 STAG3Q9UJ98 1225 aa22.02■■□□□ 1.12
CCDC58-207ENST00000498466 PRDM15P57071 1507 aaPredicted RBP22.01■■□□□ 1.11
CCDC58-207ENST00000498466 ERBINQ96RT1 1412 aa22■■□□□ 1.11
CCDC58-207ENST00000498466 RGS17Q9UGC6 210 aaPredicted RBP21.99■■□□□ 1.11
CCDC58-207ENST00000498466 MAP3K1Q13233 1512 aa21.99■■□□□ 1.11
CCDC58-207ENST00000498466 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
CCDC58-207ENST00000498466 PIK3C2BO00750 1634 aa21.96■■□□□ 1.11
CCDC58-207ENST00000498466 KANK1Q14678 1352 aa21.96■■□□□ 1.11
CCDC58-207ENST00000498466 ABCC5O15440 1437 aa21.96■■□□□ 1.11
CCDC58-207ENST00000498466 XIRP1Q702N8 1843 aaKnown RBP21.95■■□□□ 1.1
CCDC58-207ENST00000498466 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
CCDC58-207ENST00000498466 FAM135BQ49AJ0 1406 aa21.95■■□□□ 1.1
CCDC58-207ENST00000498466 TMEM94Q12767 1356 aa21.94■■□□□ 1.1
CCDC58-207ENST00000498466 EFCAB6Q5THR3 1501 aa21.92■■□□□ 1.1
CCDC58-207ENST00000498466 IDI1Q13907 227 aa21.92■■□□□ 1.1
CCDC58-207ENST00000498466 CROCC2H7BZ55 1655 aa21.91■■□□□ 1.1
CCDC58-207ENST00000498466 KCNA6P17658 529 aa21.91■■□□□ 1.1
CCDC58-207ENST00000498466 SLC26A8Q96RN1 970 aa21.91■■□□□ 1.1
CCDC58-207ENST00000498466 PROSER2Q86WR7 435 aaPredicted RBP21.9■■□□□ 1.1
CCDC58-207ENST00000498466 RBM33Q96EV2 1170 aaKnown RBP21.9■■□□□ 1.1
CCDC58-207ENST00000498466 DAPK1P53355 1430 aa21.89■■□□□ 1.1
CCDC58-207ENST00000498466 PTPN23Q9H3S7 1636 aa21.89■■□□□ 1.09
CCDC58-207ENST00000498466 CHIC2Q9UKJ5 165 aa21.87■■□□□ 1.09
CCDC58-207ENST00000498466 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
CCDC58-207ENST00000498466 KDM5AP29375 1690 aaKnown RBP21.86■■□□□ 1.09
CCDC58-207ENST00000498466 APLP2Q06481 763 aa21.86■■□□□ 1.09
CCDC58-207ENST00000498466 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
CCDC58-207ENST00000498466 BCANQ96GW7 911 aa21.86■■□□□ 1.09
CCDC58-207ENST00000498466 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
CCDC58-207ENST00000498466 ROBO1Q9Y6N7 1651 aa21.85■■□□□ 1.09
CCDC58-207ENST00000498466 TET3O43151 1660 aa21.85■■□□□ 1.09
CCDC58-207ENST00000498466 FGD6Q6ZV73 1430 aa21.82■■□□□ 1.08
CCDC58-207ENST00000498466 ADGRB3O60242 1522 aa21.82■■□□□ 1.08
CCDC58-207ENST00000498466 MSH6P52701 1360 aa21.82■■□□□ 1.08
CCDC58-207ENST00000498466 NKTRP30414 1462 aaKnown RBP21.82■■□□□ 1.08
CCDC58-207ENST00000498466 NOS1P29475 1434 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms