RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
ABCF3-218ENST00000498136 SETD1BQ9UPS6 1966 aaKnown RBP25.64■■□□□ 1.7
ABCF3-218ENST00000498136 ANKRD30AQ9BXX3 1397 aa25.64■■□□□ 1.69
ABCF3-218ENST00000498136 KDM5DQ9BY66 1539 aa25.63■■□□□ 1.69
ABCF3-218ENST00000498136 RNF17Q9BXT8 1623 aaKnown RBP25.62■■□□□ 1.69
ABCF3-218ENST00000498136 UHRF1BP1Q6BDS2 1440 aa25.62■■□□□ 1.69
ABCF3-218ENST00000498136 WASHC2CQ9Y4E1 1318 aa25.62■■□□□ 1.69
ABCF3-218ENST00000498136 HSPA2P54652 639 aa25.6■■□□□ 1.69
ABCF3-218ENST00000498136 FAM135AQ9P2D6 1515 aa25.59■■□□□ 1.69
ABCF3-218ENST00000498136 ERBINQ96RT1 1412 aa25.59■■□□□ 1.69
ABCF3-218ENST00000498136 NPATQ14207 1427 aa25.57■■□□□ 1.68
ABCF3-218ENST00000498136 NCOA1Q15788 1441 aa25.57■■□□□ 1.68
ABCF3-218ENST00000498136 ADGRL2O95490 1459 aa25.56■■□□□ 1.68
ABCF3-218ENST00000498136 ITGAEP38570 1179 aa25.56■■□□□ 1.68
ABCF3-218ENST00000498136 ZC3H13Q5T200 1668 aaKnown RBP25.55■■□□□ 1.68
ABCF3-218ENST00000498136 PTPRKQ15262 1439 aa25.53■■□□□ 1.68
ABCF3-218ENST00000498136 MROH1Q8NDA8 1641 aa25.52■■□□□ 1.68
ABCF3-218ENST00000498136 CEP152O94986 1710 aa25.52■■□□□ 1.68
ABCF3-218ENST00000498136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.51■■□□□ 1.67
ABCF3-218ENST00000498136 ABCC3O15438 1527 aa25.51■■□□□ 1.67
ABCF3-218ENST00000498136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.5■■□□□ 1.67
ABCF3-218ENST00000498136 MYO3AQ8NEV4 1616 aa25.48■■□□□ 1.67
ABCF3-218ENST00000498136 PRDM15P57071 1507 aaPredicted RBP25.48■■□□□ 1.67
ABCF3-218ENST00000498136 PZPP20742 1482 aa25.48■■□□□ 1.67
ABCF3-218ENST00000498136 DEPDC5O75140 1603 aa25.47■■□□□ 1.67
ABCF3-218ENST00000498136 KANK1Q14678 1352 aa25.46■■□□□ 1.67
ABCF3-218ENST00000498136 CAMSAP1Q5T5Y3 1602 aa25.46■■□□□ 1.67
ABCF3-218ENST00000498136 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
ABCF3-218ENST00000498136 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
ABCF3-218ENST00000498136 ANKRD50Q9ULJ7 1429 aa25.45■■□□□ 1.66
ABCF3-218ENST00000498136 ROCK1Q13464 1354 aa25.43■■□□□ 1.66
ABCF3-218ENST00000498136 TNRQ92752 1358 aa25.43■■□□□ 1.66
ABCF3-218ENST00000498136 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
ABCF3-218ENST00000498136 CFAP65Q6ZU64 1925 aaKnown RBP25.42■■□□□ 1.66
ABCF3-218ENST00000498136 CEP170BQ9Y4F5 1589 aaPredicted RBP25.41■■□□□ 1.66
ABCF3-218ENST00000498136 STRCQ7RTU9 1775 aa25.37■■□□□ 1.65
ABCF3-218ENST00000498136 A2ML1A8K2U0 1454 aa25.35■■□□□ 1.65
ABCF3-218ENST00000498136 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
ABCF3-218ENST00000498136 SPATA31D1Q6ZQQ2 1576 aa25.34■■□□□ 1.65
ABCF3-218ENST00000498136 VWDEQ8N2E2 1590 aa25.34■■□□□ 1.65
ABCF3-218ENST00000498136 LMTK2Q8IWU2 1503 aa25.32■■□□□ 1.64
ABCF3-218ENST00000498136 ARHGAP31Q2M1Z3 1444 aa25.31■■□□□ 1.64
ABCF3-218ENST00000498136 NLRP1Q9C000 1473 aa25.3■■□□□ 1.64
ABCF3-218ENST00000498136 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
ABCF3-218ENST00000498136 UNC13BO14795 1591 aa25.3■■□□□ 1.64
ABCF3-218ENST00000498136 EFCAB6Q5THR3 1501 aa25.27■■□□□ 1.64
ABCF3-218ENST00000498136 UGGT1Q9NYU2 1555 aa25.27■■□□□ 1.64
ABCF3-218ENST00000498136 NCKAP5LQ9HCH0 1330 aa25.25■■□□□ 1.63
ABCF3-218ENST00000498136 PLA2R1Q13018 1463 aa25.25■■□□□ 1.63
ABCF3-218ENST00000498136 TET3O43151 1660 aa25.24■■□□□ 1.63
ABCF3-218ENST00000498136 GCC2Q8IWJ2 1684 aa25.23■■□□□ 1.63
ABCF3-218ENST00000498136 THEMISQ8N1K5 641 aaPredicted RBP25.22■■□□□ 1.63
ABCF3-218ENST00000498136 PKD2Q13563 968 aa25.21■■□□□ 1.63
ABCF3-218ENST00000498136 IQGAP3Q86VI3 1631 aa25.21■■□□□ 1.63
ABCF3-218ENST00000498136 PTPRTO14522 1441 aa25.2■■□□□ 1.63
ABCF3-218ENST00000498136 NUP155O75694 1391 aa25.2■■□□□ 1.63
ABCF3-218ENST00000498136 NAIPQ13075 1403 aa25.2■■□□□ 1.62
ABCF3-218ENST00000498136 POLR1AO95602 1720 aaPredicted RBP25.19■■□□□ 1.62
ABCF3-218ENST00000498136 RPRD2Q5VT52 1461 aaKnown RBP25.17■■□□□ 1.62
ABCF3-218ENST00000498136 UBR1Q8IWV7 1749 aa25.17■■□□□ 1.62
ABCF3-218ENST00000498136 PIK3C2BO00750 1634 aa25.15■■□□□ 1.62
ABCF3-218ENST00000498136 SYNMO15061 1565 aa25.15■■□□□ 1.62
ABCF3-218ENST00000498136 HFM1A2PYH4 1435 aa25.15■■□□□ 1.62
ABCF3-218ENST00000498136 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
ABCF3-218ENST00000498136 E9PCH4 1651 aa25.14■■□□□ 1.62
ABCF3-218ENST00000498136 ANKLE2Q86XL3 938 aa25.14■■□□□ 1.62
ABCF3-218ENST00000498136 NOS1P29475 1434 aa25.13■■□□□ 1.61
ABCF3-218ENST00000498136 IDI1Q13907 227 aa25.1■■□□□ 1.61
ABCF3-218ENST00000498136 TRIM52Q96A61 297 aa25.09■■□□□ 1.61
ABCF3-218ENST00000498136 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
ABCF3-218ENST00000498136 SLC52A1Q9NWF4 448 aa25.07■■□□□ 1.6
ABCF3-218ENST00000498136 KDM5AP29375 1690 aaKnown RBP25.06■■□□□ 1.6
ABCF3-218ENST00000498136 ADGRB3O60242 1522 aa25.04■■□□□ 1.6
ABCF3-218ENST00000498136 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
ABCF3-218ENST00000498136 CERKQ8TCT0 537 aa25.03■■□□□ 1.6
ABCF3-218ENST00000498136 IQGAP1P46940 1657 aa25.02■■□□□ 1.6
ABCF3-218ENST00000498136 SLIT1O75093 1534 aa25.02■■□□□ 1.6
ABCF3-218ENST00000498136 EID1Q9Y6B2 187 aa25.01■■□□□ 1.59
ABCF3-218ENST00000498136 MED14O60244 1454 aa25.01■■□□□ 1.59
ABCF3-218ENST00000498136 SCAF11Q99590 1463 aaKnown RBP25.01■■□□□ 1.59
ABCF3-218ENST00000498136 SPHKAPQ2M3C7 1700 aa25■■□□□ 1.59
ABCF3-218ENST00000498136 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
ABCF3-218ENST00000498136 CHGAP10645 457 aaKnown RBP25■■□□□ 1.59
ABCF3-218ENST00000498136 TXNDC2Q86VQ3 553 aa25■■□□□ 1.59
ABCF3-218ENST00000498136 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
ABCF3-218ENST00000498136 ARHGAP23Q9P227 1491 aa25■■□□□ 1.59
ABCF3-218ENST00000498136 ILDR1Q86SU0 546 aaPredicted RBP24.99■■□□□ 1.59
ABCF3-218ENST00000498136 TMEM2Q9UHN6 1383 aa24.99■■□□□ 1.59
ABCF3-218ENST00000498136 LTBP4Q8N2S1 1624 aa24.97■■□□□ 1.59
ABCF3-218ENST00000498136 LTKP29376 864 aa24.97■■□□□ 1.59
ABCF3-218ENST00000498136 SLC4A1APQ9BWU0 796 aaKnown RBP24.96■■□□□ 1.59
ABCF3-218ENST00000498136 FBXO41Q8TF61 875 aa24.95■■□□□ 1.58
ABCF3-218ENST00000498136 TMEM131LA2VDJ0 1609 aa24.94■■□□□ 1.58
ABCF3-218ENST00000498136 SETD5Q9C0A6 1442 aa24.92■■□□□ 1.58
ABCF3-218ENST00000498136 PPP1R15AO75807 674 aaPredicted RBP24.88■■□□□ 1.57
ABCF3-218ENST00000498136 BCANQ96GW7 911 aa24.88■■□□□ 1.57
ABCF3-218ENST00000498136 RIMS2Q9UQ26 1411 aa24.87■■□□□ 1.57
ABCF3-218ENST00000498136 TRPM2O94759 1503 aa24.87■■□□□ 1.57
ABCF3-218ENST00000498136 HDGFP51858 240 aaKnown RBP24.87■■□□□ 1.57
ABCF3-218ENST00000498136 CLTCL1P53675 1640 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms